KEGG   Venturia canescens: 122408537
Entry
122408537         CDS       T09386                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 5
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
vcan  Venturia canescens
Pathway
vcan03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:vcan00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    122408537
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vcan03021]
    122408537
   03036 Chromosome and associated proteins [BR:vcan03036]
    122408537
Transcription machinery [BR:vcan03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     122408537
   Coactivators
    SAGA/TFTC/STAGA complex
     122408537
Chromosome and associated proteins [BR:vcan03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     122408537
    STAGA complex
     122408537
    TFTC complex
     122408537
    SAGA complex
     122408537
    SLIK complex
     122408537
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_WDR3_2nd Beta-prop_IFT122_1st WD40_CDC20-Fz WD40_Prp19 Beta-prop_EML_2 TFIID_NTD2 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd EIF3I WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_EML NBCH_WD40 CFAP251_N Beta-prop_Aladin ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_WDR75_1st DSE1_N Beta-prop_SCAP WDR90_beta-prop_4th PAC11 Beta-prop_RIG_2nd Beta-prop_VPS8 Beta-prop_IFT140_1st WD40_RFWD3 Beta-prop_DCAF4 Beta-prop_NOL10_N Beta-prop_EIPR1 Beta-prop_WDR41 ASA1 PEP5_VPS11_N Tricorn_2nd Beta-prop_SPT8 Beta-prop_WDR19_1st Beta-prop_HPS5 WD40_like WDR54 Beta-prop_WDR35_TULP_N Beta-prop_NWD2_C TRM82_WD Cytochrom_D1
Other DBs
NCBI-GeneID: 122408537
NCBI-ProteinID: XP_043271276
LinkDB
Position
3:15308246..15313049
AA seq 653 aa
MEADKSTMLAVLQLLRKYNFKGTEEIFRKEANLVDVPIDENAQTDSEVSSVLSAYKSEGD
PALYEKAYSELKKFVESSLDIYKHELGTILYPVLVHMYLELVYNNHSKEAAQLVEKFSGN
LEQYCQGDLKRLSNVTTREQMAGNELTDTFKSNQFIIRISRDTLSILKRHLQEKKHSVLL
NIIQEHLYFDMYEGVARNKQQIEATSGATVGEATRQDNKTKVYYGLLKEPDIQCVAPAEE
EEDDTGGGEGGDKPKKKKAKKDPLFSKKTKSDPNAPPVGRMPLPNLKDADKLEKVKALRE
ASKRVVLGPDVLPSICFYTLLNSAHTVTAAEVAEDSSLLAVGFADSTLKVWSLVPQKLRL
MKTGEQLQDIDREADDVLVRMMDDRTAETSRTLYGHNGPIYSLSFSPDRNLLLSSSEDTT
LRLWSLHTWTCVVCYKGHLYPVWSVRFSPHGYYFATGSHDKTARLWVTDSHQPLRIFAGH
YSDVDVVQFHPNSNYIASGSSDMTVRLWDCVTGNQVRLMTGHKAPIYSLAFSVEGRFLAS
AGADNRVLVWDLAHGHLVAALSSHESTVHCLSFSRDGNILVSASLDCSIKLWDFTKLADE
MSLEDVNVSHNPDVKTSTESYLLRSFPTKNSPILALHFSRRNLLLAVGMFDSA
NT seq 1962 nt   +upstreamnt  +downstreamnt
atggaggctgataaaagtacaatgctggcggtattgcaattattgcgtaaatataatttc
aagggaactgaagaaatatttagaaaggaagccaatttggttgatgttcccattgacgaa
aatgctcaaacagattcggaagttagtagcgttctatcggcgtataaaagcgaaggagat
ccagctctttatgaaaaagcatacagtgaactcaagaaattcgtcgagagctcactggat
atttacaagcatgaattgggcaccatactgtatccagttttggtacacatgtacctggaa
ctggtatacaacaatcactcgaaagaagcagcgcaactagttgagaaattcagtggcaat
ttggaacaatattgtcagggagatttgaaaagattatccaacgtcacaacgcgcgaacaa
atggcagggaatgagctcaccgatacattcaaatccaatcagtttataataagaatatca
agagacacactctctatactgaaacgacacttgcaagaaaaaaaacacagtgttttattg
aacataatacaggaacatttgtatttcgacatgtacgaaggagtggcaagaaataagcaa
caaatagaagcaacgtcaggagcaacggtaggagaagcaacaaggcaagacaacaagact
aaagtatattacggattactaaaagaaccagacattcagtgtgttgcaccagcagaggaa
gaagaggatgatacgggtggcggtgaaggtggtgataaacccaaaaagaaaaaagccaaa
aaagatccgttgttttcgaaaaaaacaaaatcggatcctaatgcacctccagttggtaga
atgcctctaccaaacttgaaagatgctgacaaattggaaaaagtaaaagctctgcgagag
gcctcgaaaagagtggtgttgggtcctgatgtacttccatcaatttgtttctacactctc
ctcaactccgcacatactgttactgcggcagaagttgcagaagattctagtttattagcc
gtcggttttgccgattctaccttaaaagtatggagcttagtaccacaaaaattgagactc
atgaaaacaggagaacaattgcaagacattgatagagaagctgacgatgttctggtcaga
atgatggatgaccgaacggccgaaacgtcgcgaactttgtacggccacaatgggcctatt
tacagcctgtcgttcagcccggatcgaaatctattactttcgtcctcggaagatacaacc
cttcgattatggtccctccatacatggacgtgcgtagtttgttacaaaggacatttgtat
cctgtatggtcagtaagattttcaccgcacggctactacttcgctaccggctctcatgac
aaaacagccagactatgggtcacagattcgcatcaacctttgagaatattcgccggtcat
tattcagatgttgacgttgttcagtttcatcccaactcgaactacatagcttccggttcg
agcgatatgacagttcgattatgggactgcgtgaccggaaatcaagtgagattaatgact
ggtcacaaagcgccaatatactcactggcgttttcggtcgagggacgttttcttgcatca
gccggtgctgacaatcgtgttctagtttgggatttggctcatggacatctcgttgctgca
ttgtccagccatgaaagcaccgttcattgcctctcgttcagcagagacggcaatattcta
gtctctgcatccctagattgttccataaaactctgggactttacaaagctagcggatgag
atgagtctggaggatgttaatgtctcgcacaatccagacgtcaaaacgtccacggaatct
tatttacttcgatcatttcctacgaaaaattcaccgatactggcactacatttttcacga
agaaatcttttgctggcagtcggtatgttcgattcagcgtaa

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