Venturia canescens: 122408668
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Entry
122408668 CDS
T09386
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
vcan
Venturia canescens
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vcan03036
]
122408668
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
vcan00535
]
122408668
Chromosome and associated proteins [BR:
vcan03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
122408668
Meiosis-specific proteins
Cohesin complex and associated proteins
122408668
Proteoglycans [BR:
vcan00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
122408668
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
Motif
Other DBs
NCBI-GeneID:
122408668
NCBI-ProteinID:
XP_043271531
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All DBs
Position
4:22074105..22080284
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AA seq
1202 aa
AA seq
DB search
MYIKQVIIQGFKSYREQTVVEPFDPRHNVVVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RQGLLHEGTGPRVISAHVEIIFDNTDGRLPIDKDEVYLRRVIGSKKDNYFLNKKNVSRTD
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERREESKAILK
ETEGKLEKIVDFLRTIEERLATLEEEKEELKEYQRWDKQRRCLEYTIHERELKDNKRKLD
ELEASRANNGAEQAKLGAEAKTAQENVRAATKRLKEAKKEVQAAKEERDTLSAEQQQLLK
EKTKLTLTINDLLEEVKGDNDSKKRAQQELEKLKLTIDEKEKELEVIRPSYEDMKRLEEE
CTRNLALKEQKRKELYAKQGRGSQFSSKDARDEWIKNELKQLTKQIKDKQEHQAKIKEDL
KRDSDKQVMLEKKIAEYTVEMERQRALIDEHNKQYYEMNKAKDQCQATRKEQYRQESVLQ
LNLSGLKEDLAKADQSLRSMAGKPILNGRDSVRKVLETFRQRPDMAHEVNSYYGPVIENF
DCDKSVYMAVEVTAGNRLFHHIVETDKFGTKILKEMNNQRLPGEVTFMPLNRLHVKVQDY
PNTSDAIPMISKLKYDNKYDRALRYIFGKTLICRNLEAATSLARESGLDCVTLEGDQVSS
KGSLTGGYFNTLRSRLEIQKTRSELMAQIATLESQLATLKEDIRNADQSISSYVSEMQRT
ETKNSKAKDINDKMKAEIRMMKEELSAIERYRAPKERSLAQCTSSLEAMKATKEGLESEL
HQDLMAQLSVADQEQVDTLNDEIRALTKENKTAFATRMRREAEKNKLENLLTNNLMRRRD
ELIQALQEISVEDRQRQLDSCKTQLADIEKRLLKVNNDFRLQNDKVANASKKQKLESSEV
DKWKAKEKEAQEKIEADAKDLEKLASKQNILQQKISECTQKITELGALPSPEAYAKFTMM
STKQLFREMEKANNHLKKYSHVNKKALDQFMSFSDQKEKLVRRKEELDRGDEKIKELMSV
LEQRKYEAIQFTFKQVSKYFSEVFKKLVPSGHAQLVMKTADGEEGDDAGSETADSDRFTG
VGIRVSFTVQTAEMREMNQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDAQHRK
AVADMIHELSSDAQFITTTFRPELLQHANKFYGVKFRNKVSHVECVTREEAADFVEDDTT
HG
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcaaacaggtcattattcaaggcttcaaatcataccgtgagcaaacggttgta
gagccttttgatcccaggcataatgtagtcgttggaagaaatggctctggaaagagtaat
tttttctatgctattcagtttgtactgagtgatgaattttctcatttgaggcctgaacaa
aggcagggtctcttacatgagggtactggaccacgagtcatatctgcgcatgtggaaatt
atttttgacaacactgatggaagattaccgattgacaaggatgaggtttatttgcgacgt
gtcataggctctaaaaaagacaattattttctaaataagaagaacgtttcgaggacagac
gtgatgaatttgctcgaatccgctggtttctcgagatcgaatccttattacattgtgaaa
caaggaaaaatcaatcaaatggctactgctccagattctcaaagattgaaattactgcgt
gaagttgccggtactcgggtttacgatgagagacgtgaagaatctaaagctattttgaaa
gagactgagggaaaactggaaaaaatcgtcgactttttgcgcacaatagaggaacgtttg
gcaactctcgaggaagagaaagaagagcttaaagaatatcagcgttgggacaagcaacga
cgctgtctcgagtatacgatacatgagcgagaattgaaggacaataaacgaaaattggac
gaattggaagcgtcgcgagcaaataatggtgctgagcaagctaagcttggagctgaggct
aaaactgcacaagaaaatgtccgtgcagcaacaaaacgactgaaagaagcgaagaaagag
gtccaagctgcgaaagaagaaagagatacactcagtgctgaacaacaacaactgctaaaa
gaaaagacgaaattgacgttaacgataaacgacttattagaagaagtcaaaggcgacaat
gacagtaaaaaaagagcgcagcaagagctggaaaaattgaagctcacgatagatgaaaaa
gaaaaagagctcgaagtcatacgaccctcttacgaggatatgaaacggttggaagaagaa
tgtacgcgtaatttagctctaaaagagcaaaagcgtaaggagctatacgcgaaacaaggt
cgaggcagtcaatttagcagcaaagatgctagggatgaatggatcaaaaacgagctgaag
caactcactaaacaaatcaaagacaagcaggaacatcaagcaaaaattaaggaagatttg
aaacgagacagtgacaaacaagttatgttggagaaaaaaatagctgaatacactgtcgaa
atggagcgacaaagggccttgatcgatgaacacaacaaacagtactatgaaatgaacaaa
gcgaaagatcagtgccaagcgactcgcaaggagcagtatcgccaagagagtgtattgcag
cttaatttgtctggtttaaaagaagacttggcaaaagccgatcagagtttgagatccatg
gctggaaaacctattctcaatggcagagacagtgttcgcaaagtgttggagacttttcga
caacgtcctgatatggcccacgaagttaacagctattatggtccagtgattgagaacttt
gattgcgacaagagtgtttacatggccgtagaagtaactgctggcaatcgattgtttcat
cacattgtagaaaccgacaaatttggtacgaaaattctcaaagaaatgaacaaccaacgt
ttacctggagaggtcactttcatgcctctgaatcgtcttcacgtcaaggttcaagactat
ccgaacacgagtgacgctattcctatgatatcaaaattgaaatacgacaacaaatatgat
cgagctttaaggtatattttcggaaaaactctaatctgccgtaatctcgaagctgcgacg
agcctcgcgcgtgagtcaggcctcgattgtgttactcttgagggtgaccaagtttcctcc
aaaggttctttgaccggcggttacttcaacactctaagatcacgtcttgagattcaaaaa
acacgatcagagctaatggcacaaatagcaactttggagagtcaattagcgacgttaaag
gaagacattagaaatgccgatcagagtatcagctcgtacgtgagcgaaatgcaacgaact
gaaactaaaaacagcaaagcgaaagacatcaacgataaaatgaaggcagaaatacgaatg
atgaaagaagagctcagcgcaattgagagataccgtgcaccaaaggagagaagcttagct
cagtgtacctcgagtttggaagctatgaaagctacgaaagaaggtctggaaagtgaactt
catcaagacctgatggcccaactgtcagtcgccgatcaagaacaagtcgacactttgaac
gatgaaataagagccttgacgaaggagaacaaaactgcgtttgcgacgagaatgcgtcgg
gaagcggaaaaaaataaattggagaatttattgacgaacaatttgatgaggcgcagagat
gaattgatccaggcgctccaggaaatctccgtagaagatcgacaacgtcaattagattcg
tgcaaaactcagttggctgacattgagaaaagattgctgaaagttaacaatgacttcaga
ctacaaaacgacaaagtagcaaacgcctcgaaaaagcaaaagttagaatcctctgaagtt
gacaagtggaaagccaaggagaaagaagcgcaagaaaaaatcgaggctgacgctaaagac
ttggagaaattggctagcaagcaaaatatattgcagcaaaaaatatctgaatgcacacaa
aaaatcaccgagctcggggctttacccagtcctgaagcttatgccaagttcactatgatg
tcgaccaaacagctgttcagagaaatggaaaaagcgaataatcatctcaagaaatacagc
cacgtgaataagaaagcgttggaccaatttatgtcattcagcgatcagaaagaaaaattg
gtaagacgtaaagaggagttggatcggggcgatgagaaaataaaagagcttatgtccgtt
cttgaacaacggaaatacgaagcgatccaattcacgtttaaacaagtcagcaaatacttc
agcgaagttttcaaaaaattggtaccctccggacacgcgcaactcgtcatgaaaactgcg
gacggagaagagggcgatgatgccggttcagagactgcggactccgatagatttacggga
gttggaatccgagtttcttttaccgtccaaaccgcagaaatgcgagaaatgaatcagtta
tccggtggacagaaatcccttgtggcccttgctttgatttttgccattcaaaaatgcgat
ccggctccgttttatctcttcgatgagatcgatcaggcactcgatgctcagcatcgaaaa
gccgttgctgatatgattcacgagctcagttcagatgcgcagttcatcacgacgactttc
aggccagagttgcttcaacacgcaaacaaattttacggagtaaaatttcgcaacaaggtt
tctcacgtggagtgcgttacgcgcgaggaagccgcagactttgtcgaggacgacacgact
cacggataa
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