Venturia canescens: 122408674
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Entry
122408674 CDS
T09386
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
vcan
Venturia canescens
Pathway
vcan03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122408674
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcan03019
]
122408674
03036 Chromosome and associated proteins [BR:
vcan03036
]
122408674
Messenger RNA biogenesis [BR:
vcan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122408674
Chromosome and associated proteins [BR:
vcan03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
122408674
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
122408674
NCBI-ProteinID:
XP_043271540
LinkDB
All DBs
Position
4:12294289..12306754
Genome browser
AA seq
1872 aa
AA seq
DB search
MFGQAGNTSFGGFNTATQSSPFGQSAFGKPISTTSFGTGATPVFGSNNTSLFSAKPAGAT
TNSLFGNTAAAPAFGQPATTQSSFGAFGGTGANTSLFGTQQNANTNLFGTSATTSAFGQA
NKPAGFGFGAPASNNLFGQPQSGLQQATPFGQTSTAANTSLFGNTGGFRSNTTATGITGT
MVKFNPLTGTDTMVKNGVTQNISTRHQCIMCMKEYESKSLEELRLEDYTAGLKGPAQTGQ
TTGLFGATAQQSPFGNTGAITSTGTSGFGSIGSGFGASTQTAATGSLFGKPVTGFGAPTT
TTSAFAFNPATTSNLFGVNTQTKPFGTAAPTTLFSNTGTAQSATTGFGVMNGAQNSSFGS
FGTTQPTQSIGLFNQNKSAFNIPTSNSGFGAFGQTAAANTGTSVFGPKPLGTTGFGAPTF
GTGTAPSFGNTTAFGNTQNTNTSLFNSTLKPPGQNTGFSFGATPVSSSGLGTNTGLTLGV
GGSLFGQSKPGGLFSSGTTGTTFNTGSTFNSTPGFGTNTGLGNTSLGMNLLGSGMGTNPN
QQNSSSVAVHQQILALVSAPFGDSPLLKNLLPASGKAEELLKPANPVSRTLNSPQYKVTT
NNNSPKVKPRVVTGVSLSKKSLFEGLEEEDPTLLEAFQPRPNTKRLVLRPKAPSSAQTNS
VEQLNSSRNNGNREESVDATSSCGNDPRDETVDVGSPSTTQDTETSTTKNVQKPNLRGKN
ERTSSDSWLRRRQVTGFEENRASLDNTDIAEEALEYTLEEFRAHRNNPTASSNNESPSAN
VSLSSMGADKSAGDSPGVFNDTTHDLEESLLSIVQQDWEPNKSKVILRRVGYYTRPPYEK
LEDYVHGETCVVPNFTIGRKGYGNVYFPDSFDIYGLNLDEIVHFRHKEVIIYPDDEKKPP
VGQGLNRRAQVTLEHVWPHDKSLHEPITDPYRLTTMNYEEKLRRVSAKHDTRFLEYRPET
GSWVFKVDHFSKYGLSDSDDDDNDVPLDPGMKKLKGIVKWDKELSTSRTVVTGATNGTPR
NLDKTGSLNHEDESDLDRTLPVKDFSGEKQHSALSPTSIHARIMGTDSHKLQLMKASFFD
HEDENDEPMYEGTQQPSFKNHFKAYDIMDEDQPALQSYFPTLRSNLTLHNQLPFASPTDS
VYDTKEIKMKQPVEVKSEKFTKLVKAFPPPIVKPTTVVLKFRGEVIPLHRSICSRLKFQS
IADIGIQMGRTFRPSWGPGLTLVSLSSQEQAAVVPLHNTFSQIETYVSGRLMDDTTSMSI
VQRLQILGGAGADSDHVEMFRDSIEDHLRIQLNHCIMGQEGDCPVIEAPTGESALAALHA
HCAQAEKLANYVAPDRLAFYSRDVWRLCIALWGNLPELQPDADKERHDAVIVRREAFGDW
LKTVVEENVQREIAEISEDDRLIFSLLTANKLEEACEQAAKTGDYTLALLISQLGGAAAV
KELLKQTIALWQATDIVADFSMCRLKLYMLVASEQLISCREDVVNACENLDWKRALAVHL
WYLASPTASITDVLDLYVASFSGAPTDIYAAAPLPDYKDEDYDAEISSGKQTYDLCYHLL
KLYSTGDHQLEELLNPLTHTADPLDYRLSWLMLQMIVGLGYKHLSEHVAALTHTNFASQL
EAYDLWHWAIFVVLHLRDSGIRRKAVLDLLSRHVEIDDDPEYVKREEFLKEELGISSMWI
NEAKAVKGCAMQRYGEAAWYLIQAELWNKAHEVIIEHLAADAVINENYEYLRSLLSPLVP
TECNTLVNGWAYQGQLLWDYMEIAVEIETFLKNRDFAEIGYKLELLQPQLTSLCTKINHF
PCPTAKLRLCQAEIAKRTLHLARSLLLLQPNENRSTARVLVHLVSQLPLPEDYAQQELRP
IINMCVNEVLSH
NT seq
5619 nt
NT seq
+upstream
nt +downstream
nt
atgttcggccaagcaggaaacacgtctttcggtggattcaacacggcgactcagagtagt
cctttcggacagtctgcttttggtaaaccgatttctaccacaagctttggtactggggca
actcctgtatttggtagcaacaacacctcactttttagtgctaaacctgcaggtgctacc
accaatagtttgttcgggaatactgcagctgcaccagcgtttggacaacccgctactact
caatcgtcctttggagcatttggtggaactggagcaaacacaagtctgtttggtactcag
caaaatgccaatactaatttattcggtacaagcgcaacaacatcagcattcggtcaagca
aataaaccagctggttttggatttggagctccagcgagcaacaatctatttgggcagccg
caatcaggactacaacaagcaacaccattcgggcaaaccagtacagctgccaatacgagt
ctttttggtaacaccggaggattcagaagtaacacaactgcaacaggcattaccgggacc
atggtgaaattcaatccattgactggcactgatacgatggtgaaaaatggtgtgacacaa
aacatatcaacacgtcaccaatgcatcatgtgcatgaaagaatatgagtccaaatctctc
gaagaactgcgcctggaagattacactgctggattgaaaggacccgctcaaactggtcaa
accacaggactttttggtgcaacagcccagcaatcaccttttggaaacacaggggcaata
acgagcaccggcaccagcggttttggctctattgggagtggatttggagcttctactcaa
acagcagcaaccggaagcctttttggtaaaccagtcactgggttcggtgcgccaacaact
acaaccagtgcctttgcctttaatcctgcaacaacatcaaatctctttggtgtgaataca
caaaccaaaccatttggtactgctgcgccaacaacactcttttcaaatacaggcacagct
caatccgctacaactggatttggcgttatgaacggagctcaaaactcgagttttggatct
tttggcacaactcagcccacccagagcataggactatttaatcagaataaatctgcgttc
aatattccaacgtcgaattcgggctttggagctttcggccaaactgcagcagccaacact
ggaacttcggttttcgggcctaaaccattgggaacaacaggtttcggagcaccaactttt
ggcacaggcactgctccctcgttcggaaataccacagctttcggaaatactcaaaataca
aatacttcgttgttcaactccacattgaagcctcctggtcaaaataccggtttctccttc
ggagctactccggtttcttcatccggactcggtaccaacacgggtctcacattgggcgtg
ggaggttctcttttcggccaatcgaaaccaggcggtttgttcagtagtggaacgaccgga
acaacatttaataccggaagcaccttcaattcaactcctggattcggaacaaacacgggt
ctcggcaacacgagtctcggaatgaatttgctcggtagcgggatgggaacaaatccaaat
caacaaaattcaagttccgtcgcagtacatcaacaaattttggccctggtatcagcccca
ttcggagattcacctctgttgaaaaatctactacccgcttcgggtaaagcagaggaactt
ttgaaacccgccaatccagtatccagaactctaaacagtccacagtataaagtgaccacg
aacaacaattcccccaaggttaagcctcgagtcgtaacgggagtgtcattgtccaagaaa
tcgcttttcgaaggtctcgaggaagaagatccaactttgttggaggccttccagccacgt
cccaacaccaaacgattggtacttcgaccgaaagcgccgagcagtgctcagactaattct
gttgagcagcttaacagttcacggaataacgggaaccgtgaagaaagtgttgacgccact
tcttcttgtggcaatgatcctcgtgatgaaaccgtcgatgttggttcaccttccacgaca
caagacacggaaacttctaccacgaaaaatgtgcaaaaaccgaatctgcgaggcaaaaat
gaacgcacgtcttcagattcatggttgagaagacgccaagtaacaggattcgaagaaaat
cgtgcgtcactcgataatacggatattgcagaggaggcattggaatatacactcgaagaa
ttccgtgcacacagaaacaatcctacagcatcatcgaataacgagagtccatcagcaaac
gtgagtctcagttctatgggtgcggacaaaagtgcaggcgattctcccggagttttcaac
gatactacccatgatctcgaggaaagtttactgtcaattgttcaacaagattgggaacca
aataaatcgaaagtgatactacgacgtgttggttactacacgcgtcctccttatgaaaaa
ctcgaggattatgttcatggcgaaacctgcgttgttcccaacttcaccattggtcgcaaa
ggatacggaaacgtttattttccagattcatttgatatctacggattgaacctcgatgag
atcgtacacttccgtcataaagaagtcatcatttatcctgatgacgagaagaaaccacct
gttggacaaggcttgaatcgtcgtgctcaagtaacgctcgaacacgtttggcctcacgac
aaatctctccacgaaccgatcaccgatccttaccgtttgactaccatgaattatgaggaa
aagctacgcagagtttcggctaaacacgacacgcgctttctcgagtatcgcccagaaact
ggatcctgggttttcaaagttgatcacttctccaaatacggtttgagcgattccgacgac
gatgacaatgacgtaccccttgatccaggcatgaaaaaactgaagggtattgtaaaatgg
gataaagagttgtcgactagtcgaacagttgtcaccggagcgacaaatggcaccccccgc
aatctggataaaacgggaagcttgaaccacgaagatgaaagcgatttggatagaacgctt
cctgtcaaggatttcagcggtgaaaaacagcactcagcattgagtccaacatcgatccat
gcaaggatcatgggtaccgacagtcacaaactacaactgatgaaggccagttttttcgac
cacgaagatgaaaacgatgagccgatgtacgaaggcactcagcaaccttctttcaaaaat
catttcaaagcttacgatataatggacgaagatcaaccagcattacaatcgtattttcca
actttgcgatcgaatctgacgcttcacaaccaattgccgttcgcgtcacccactgattca
gtctacgatactaaagaaatcaaaatgaagcagcccgtggaagtgaagtctgagaaattc
acgaaactggtgaaagcgtttccaccgccgattgtcaaaccgactacggtcgtcttgaaa
ttccgtggcgaagtcattccactgcatcgatcgatttgcagcaggctcaaattccaaagt
attgctgatattggcatacaaatgggacgaactttccggccgagctggggccctggatta
actttagtttctctcagcagccaagaacaagctgctgttgttccacttcacaatactttt
agtcagatcgaaacttatgtgtctggtcgactgatggacgatacaacctcaatgagcatc
gttcaacgccttcagatattaggaggtgctggcgctgatagcgatcacgttgaaatgttc
agagacagcatcgaggatcaccttcgaattcaattaaatcactgcataatgggtcaggag
ggtgattgtccagtgattgaagcaccgactggtgaatctgcactggctgcccttcacgcc
cactgtgcccaggctgaaaaacttgcaaattacgttgctcctgatcgtcttgcattttac
tcaagagacgtgtggagactgtgcattgctctgtggggaaatttgcccgaattacagcca
gacgcagataaagaaagacatgatgcagtgatagtgagacgagaagctttcggtgattgg
ctcaaaactgttgtcgaagaaaacgttcaacgtgaaatcgctgaaatcagtgaggacgat
cgtttaatattttcgttgttaactgctaacaaattggaggaagcctgtgagcaagcagcg
aagaccggtgattacacgctggctttattgatatcacagctcggtggtgccgcagcagtg
aaagaattgcttaaacaaacaatcgcactgtggcaagcgacggacatcgttgcagatttt
tcaatgtgtcgattgaaattgtacatgcttgtagcgagcgaacaactaatatcgtgtcgc
gaagacgtcgtaaatgcttgcgagaatctcgattggaaaagagctttagcagtacacctt
tggtatttggcatcaccaacagcttcgataactgacgttctcgatctttatgtcgcttcg
ttcagcggcgctccgacagacatttatgcagctgcaccgttacctgattacaaagacgag
gattacgatgctgaaataagcagtggaaaacagacttacgatctttgctatcatctactc
aaactctatagcaccggtgatcatcaactcgaggaacttctcaatcctttgacacacact
gctgatcctcttgactacaggcttagctggttgatgctgcaaatgatcgttggacttggc
tacaagcatttatcagaacacgtggcagcactgacccacacaaattttgcttctcaactc
gaagcttacgatctatggcattgggcaattttcgttgtgttgcatcttcgcgattccggc
atacgtaggaaggctgtgcttgatttactttcgcgacacgtcgagattgacgatgatccg
gagtacgtgaaacgcgaagaattcctgaaagaagaactcggcatatcctccatgtggata
aacgaggctaaggctgttaaaggttgtgcaatgcaacggtacggcgaagcagcgtggtat
ctcattcaggccgaattgtggaacaaagctcacgaagtcatcatagaacatctcgcggct
gatgcagtaattaacgaaaattatgaatacttgagatctctgctgagcccactcgtgcca
actgaatgcaacaccctcgtgaacggttgggcataccagggacaattgctctgggattat
atggaaattgctgtcgagattgaaacgttcttgaagaaccgggatttcgctgaaataggt
tacaagctcgagctccttcagccccaactcacttcgctgtgcactaagataaaccatttc
ccttgcccaactgcaaaactaagattgtgccaagccgaaatcgccaaaagaacattgcat
cttgctcgtagtctgttgctcttgcaaccgaatgaaaacaggtcaacggctcgtgttctg
gtacatctggtttcgcagttgcctttaccggaggactatgcgcagcaagaattacggcca
ataataaatatgtgcgtgaacgaagtattaagtcattga
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integrated database retrieval system
