Venturia canescens: 122408708
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Entry
122408708 CDS
T09386
Name
(RefSeq) DDB1- and CUL4-associated factor 5 isoform X1
KO
K11800
DDB1- and CUL4-associated factor 5
Organism
vcan
Venturia canescens
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vcan04121
]
122408708
Ubiquitin system [BR:
vcan04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
122408708
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
122408708
NCBI-ProteinID:
XP_043271606
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Position
4:complement(8628761..8637628)
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AA seq
749 aa
AA seq
DB search
MARPSTRNPLDCFLRRQIDDRTNHCKRLVSARIDDSENLFRKDLLSHYGCVNAIEFSPQG
DLLISGGDDRRVLLWKVEQAIQGVGKPMPMRAQHGSNIFCLGYDSGKTKIFSAGNDDQVI
IHNLENGAPLNFFLHEKPVYGLSTHPHNDNVFSSACDDGRVLIFDIRDSSSTETFCLAQY
KTAFHSVVFNPMEPRTLATANAQEGISLWDVRKPMTPVLRYGSEGPSQGCMNVRFNSAGT
RLLALRRRLPPVLYAVDSPTHLCHFDQPGYYNSCTMKSCCFAGDDDEYVLSGSDDFNLYM
WKIPSEEIKWVDSAHMILRGHRSIVNQVRYNRASCILASSGVEKIIKIWSPFPLCNSCLG
SLKRDSGKQERQRRVFTHDEYIELVLRSGEFMTHDYSHQSTLEDPRMMAFFDSLVQREIE
GWGSEDTPNSPRSISETKNTLNPGQTQNFATDSDDSAHQIMRSVLGATTRNSTRTGSGGG
LAPERSVDSPNRITRLIGNRREKLMRLAAIEAGAQVVNLSSNSANNDEESDPQEREIGSD
ENEEDDDEVLPAKFKSKSKSRSKGLKRKQRAASATMLTADSDHGESSKSSENEEAVRNKR
KRGRNEGEASSSRIHRRQQGKLRTRKSATTSGEQQTNTETSSNHIDEVVNGFTEESAACT
ATPSKILSSNKISPPTPDSGITSCSSTLEKCESNGSSGARNAAENSDHEMRVKHLETFKK
KIDVARRGYRKRLTPQAKIAASTASDSSD
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtccgtcgacgcgtaatcccctcgactgctttttgcgaaggcaaattgatgat
cgtaccaatcattgcaagcggctggttagtgcgagaatagatgattctgagaatctcttt
cgcaaggatttgctctcccattatggttgcgttaacgccatagaattttcaccacagggt
gatctcctcatttctggtggagacgaccgtcgagtgttgctatggaaggtcgaacaagcg
atccagggtgttggaaagcccatgcctatgagggctcagcatggaagtaatattttttgt
ttgggttacgacagcggtaaaacgaaaatattttctgcgggtaacgacgaccaagtcatc
atccacaacctcgaaaatggagctcctcttaacttttttttgcacgagaaaccggtgtac
ggtttgtcgacacatccccacaacgataacgtcttctcgagcgcgtgcgacgacggcaga
gtgctcatttttgacatcagagattcgagcagtacagaaacattttgtctggcccaatat
aagactgctttccactccgtcgtcttcaatcccatggagccgagaactctagccacggct
aatgcgcaagagggtataagcttgtgggatgtcagaaaaccgatgacgcccgttttacgt
tatggaagcgaagggccctctcagggctgcatgaacgtgcgtttcaattccgcgggaacg
agacttctcgccctccgaagacgtttgccgccggtcctgtatgctgtcgattctcctacg
catctctgccactttgatcaacctggttattacaacagttgcacgatgaagtcctgttgc
ttcgccggtgacgatgacgaatacgttttatcgggatcggatgatttcaacttgtacatg
tggaaaattccaagtgaagaaatcaaatgggtggactcggcacatatgattttacgtggc
caccgttcaatcgtcaatcaagtccggtataatagagcaagttgtattctcgcatcttcg
ggtgtcgaaaagatcatcaagatttggagtccattcccattgtgcaactcttgcctcggt
agcttgaagagagactcgggcaaacaggaacgtcagcgtcgagtattcacacatgacgag
tacatagaattggttttgagaagcggggaatttatgacccacgactacagtcaccaatcg
actctcgaagatccgagaatgatggcgtttttcgattctcttgtacaacgcgagatcgaa
gggtggggttccgaagacacaccgaacagcccacgaagtataagtgagacgaaaaataca
ttgaatccaggacaaacacaaaatttcgccaccgactctgatgattccgctcatcaaata
atgcgctctgtactaggagcaactacacgaaacagtactcgaactggatccgggggtggt
ttggcgccggaaagatcggtcgattcgccaaatcgaataacgagattaataggaaatcgg
cgcgagaaactgatgaggctagcagctattgaagccggtgctcaagtggtgaatctctcc
agtaacagtgcgaacaacgatgaagaatcagacccgcaagagagggaaataggatcggat
gaaaatgaagaagacgacgatgaagtgctaccggcgaaattcaaatcaaaatcgaaatct
cgtagtaaaggactgaaacgtaaacagcgagcggcttcagcaacgatgttaacggcggac
agcgatcacggtgaatcgagcaaaagtagcgagaacgaagaggcagttcgaaataagcga
aaaagaggtcgtaacgagggggaagcctcatcatcgcgaattcatcgtcgtcaacagggt
aagctgaggactcgcaaatcggcgacaacctcaggagagcagcaaacaaacacggagacg
tcgagtaatcacattgatgaagttgttaatggttttacggaggagagtgcagcgtgcaca
gcaacgccgtcaaaaatattgtcaagcaataaaatatcaccgccaacacctgatagcggt
atcacatcgtgctcgtctacactcgaaaaatgtgaaagcaacggtagctcaggagctcga
aacgctgctgagaactcggatcacgagatgagagttaaacatctagaaactttcaaaaaa
aagattgatgtagcgcgccgcggctatcgaaagcgattaactccgcaagcaaaaatcgct
gcatcgacagcttcggactcttctgattag
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