Venturia canescens: 122408723
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Entry
122408723 CDS
T09386
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
KO
K16474
intraflagellar transport protein 88
Organism
vcan
Venturia canescens
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
vcan03037
]
122408723
Cilium and associated proteins [BR:
vcan03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
122408723
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Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_8
TPR_14
TPR_19
TPR_16
TPR_7
TPR_11
TPR_6
TPR_17
TPR_9
TPR_CcmH_CycH
ANAPC3
ARM_TT21_5th
TPR-S
HAT_PRP39_C
RNPP_C
ARM_TT21_C
ARM_TT21_N
RPN7
DUF3856
BTAD
T7SS_EccA1_N
ARM_TT21_4th
Motif
Other DBs
NCBI-GeneID:
122408723
NCBI-ProteinID:
XP_043271638
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Position
4:15136191..15148203
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AA seq
827 aa
AA seq
DB search
MLGTESLVDDDLYMGYNDYPSIYSTKDLDQDELFQQALQTSYAKRSIHTPKTPGTAMRLG
TSTGFHRRGTAVTGRPGTGPRPMTAVRGAGYTSNNRQPFDPLNMANTSRGPAPPLTTGKE
DTQEEKIKVAERKIMELIESSAMAESENDMKVALERAREASSRERILIRLQEQTGLSDNH
NVDLTFAVLFNLAIQYSNNEMYTEAIATYQAITRKKVFRDSARLKVNMGNIYVKIGQLSQ
AIKMYRMALDQATAAHKDLRIKIMHNIGMLFVQMGRLEEAANSFEWVMRERAEFKAGLHA
ILCHFALSHRDKMKRDFLELLEVQLNIDQEDKYSMSTDDVAANILNEVIKVDELSKLEKE
MKLEAEKTILSAAKLIAPVIEDTLSAGFAWCVEAIRSSAYGPLAADLEINKAMVFLHNRE
TSLAIETLKAFENRETKANSAASTMLSFIYFLRGDYDQSERYAEAARKADSYNAAAYVNL
SACAIKKGELETSRELLLCALDSDASHIQALYNLGLVYKKQSMYEEALECFWKLRNIVRH
DPQTLYQIGHLYQLMNDFDQAAEWFNQLLGIIPSDPGVLQKLGEMYDNLGDKQQAYQYYS
DSYRFYPANFEVIDWLGSYFISMQVAEKALAYFERAVELAPDQPRWRLLVAACLRRTGQF
HKALTEYQDIHKRFPENIECLKFLVRLCSDLGLKEAQNYANELKKAERAKELKERQGSAR
PGTTGSRRSNSGASSRGGSGLSMQSDNRSSPVPLRKENRGTSSSGANRLSRVSTFDNHTE
FTPEANGPPEINYADPVGPMPVRPMTSAGKRDDDFGDEELGDDLLPV
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgttgggaacagaatcgttggtcgacgatgatctgtacatgggctacaatgactatccc
tcgatctacagtaccaaagatcttgatcaggatgaattgtttcaacaagctctacaaact
agctacgccaaacggtcgattcacacaccaaaaactccaggaacggcgatgcgactcgga
acttctactggtttccataggcgaggtacagcggtcacaggtcgacctggaacaggtccg
agaccaatgaccgcagtccgcggggctggctacacgagcaataatcgtcagccctttgac
ccccttaatatggcgaatacctcaagggggcccgctccgccactgacaaccggcaaagaa
gacacccaggaagaaaagatcaaagttgccgagcgcaaaataatggaattgatcgaaagt
tcggcgatggcggagagcgaaaatgacatgaaagttgccctcgagcgagcccgggaagca
tcctccagagaaagaatcctcatacgtcttcaggaacaaacgggcctgagtgacaaccac
aacgtcgacttgaccttcgcagttttattcaatttggcaatccaatattcaaacaacgag
atgtacacggaagcgattgctacgtatcaggcaataacgagaaaaaaagtattcagggac
agcgcgaggctgaaagtcaacatggggaatatatacgtgaaaataggtcaattgtcacag
gctataaaaatgtacagaatggctctcgatcaagcaaccgcagctcacaaagatctacgg
atcaaaataatgcacaatatcggtatgcttttcgtgcaaatgggacgtttggaggaagct
gccaatagtttcgagtgggtgatgcgagaaagggctgaattcaaagccggcttacacgct
atactctgccactttgctctttcccatcgagataaaatgaagcgtgattttttggagctc
ctcgaggtacaactcaacattgatcaggaggacaaatacagtatgagcacggacgatgtt
gccgcgaatatattgaacgaagtaataaaggtcgacgaactttcaaaattggagaaagag
atgaagctggaggcagaaaaaacgatcctgagcgcagcgaagctcatagctccggttatt
gaggacacattatcggctggattcgcttggtgcgtcgaagccataaggtcctcggcctac
ggtccactcgccgcggatttggagatcaacaaagccatggtttttctccacaatcgggag
acctcattggcgattgaaacactgaaagccttcgagaacagagaaacaaaagcgaatagc
gccgcatcgacgatgttgtcgttcatttatttcctcaggggcgattacgatcaatcggaa
cgttatgccgaagcagctcggaaggcagacagctataacgctgcggcttatgttaatctt
tcggcatgtgccatcaaaaaaggcgaattagaaacttcgcgtgaattattgctctgcgct
cttgacagtgacgccagtcacattcaggcactctacaatttaggattggtttataaaaaa
caaagcatgtacgaagaggctctcgagtgcttctggaaattacgaaatattgtacgacac
gatcctcagaccctctatcaaatcggacatctctatcaactgatgaacgacttcgatcag
gcagctgaatggttcaatcaattgttgggcatcattccttccgaccctggcgtactgcaa
aagttgggtgaaatgtacgacaatctcggcgataagcaacaggcgtatcagtactacagc
gactcttacagattctatccagcgaatttcgaggtcattgattggctgggttcttatttc
atatcgatgcaggtcgccgaaaaagctctggcgtacttcgagcgagcggtcgagctcgca
cccgatcaaccacgttggcgtttgctggtagcagcgtgtctcagacgaaccggtcagttc
cacaaagctcttaccgagtaccaggacattcacaaacgatttcctgaaaacatcgagtgt
ctcaagttcctcgtgagattgtgcagcgatctcggcctcaaagaggcgcagaattatgcg
aacgagcttaagaaggcggagagggctaaggagttgaaggaacgtcaaggatccgcacgg
ccagggacgacaggatcgaggagaagcaacagcggcgcctcgtcgaggggaggctcgggc
ctgagtatgcagtcggacaatcgttccagtcctgtgccccttcgcaaggagaaccgtggc
acttcctccagcggggctaatcgcttgagtcgcgtttcaacgttcgataatcacaccgag
ttcactccggaggccaacggtccccctgaaataaattacgcggatccggttggtcctatg
ccagtgcgaccgatgacatcggccggtaaaagagacgacgatttcggtgacgaggaactg
ggcgatgaccttctgccggtgtga
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