Venturia canescens: 122408734
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Entry
122408734 CDS
T09386
Name
(RefSeq) rab5 GDP/GTP exchange factor
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
vcan
Venturia canescens
Pathway
vcan04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
122408734
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vcan04131
]
122408734
Membrane trafficking [BR:
vcan04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
122408734
Protein recycling
Other Rab GTPase associated proteins
122408734
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
Motif
Other DBs
NCBI-GeneID:
122408734
NCBI-ProteinID:
XP_043271650
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All DBs
Position
4:12345859..12349550
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AA seq
625 aa
AA seq
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MSKNKAASRRIAADLLCKNGCGFYRNAEWEGYCSKCYREHLQKRRAQRERTAKSQSHEGE
SPGKVSRSSSYGRSDDPKRQHEKKNKLLNISSFWKPTVKSHGYDDNQDLEKVKIESRELL
ALIVKTPAEKDVQKCINSFVNKIIQNKDFKRIEELSEIAQNFYQGFGKRMENSPNYAGIS
SEVKERLLDYVERYAMTLLYSTLFCPQFTTDEDKDLAIQNRIRQLNWVSGKHLECRIHET
SPEVRELVYTSITDLLNMDSAKAPQEKLACVVHCCRNIFLLLQQSVGGPASADEFLPALI
FIVLKANPARLKSNINFITRFCNASKLMTGEGGYYFTNLCCAVSFVENLTAESLNMSQKD
FDAYMSGERVPANTWESALTICESLHLMCEEVTLLDELKVKNENIVKEALELKKEWLEFH
DKIKTEISALVERTPLIISRSQRIPTNLDCELDLESYQLPPPIIPQIFSHMANEETDSLT
VGARTSDGKASSSSTEDCGCITPSPTFDFPPFSDDCCLDRSRADDETSLISLETQSDFMM
GNETQAQSDDRSIADSLLDNSPQNQATNLPSPLKPAPRKSSNLAEDYHGFTLQGSTIQTI
PCDTGDLSHATDHESDPYSTYYQNI
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagaacaaagcagcctcaaggcgaatcgcagctgatctactgtgcaaaaatggt
tgtggattttatagaaatgccgagtgggaaggatattgcagcaaatgttacagagaacat
ttacaaaaacgtagagcacagagagaacgaacagcaaaaagtcaaagtcatgaaggtgag
agtcctggaaaagtttcaagatcatcaagttatgggagaagcgacgacccaaaacggcag
catgaaaaaaagaacaagctcttgaatatttcttcattttggaaaccaacagtgaaatca
catggctacgatgataaccaagatttggagaaagtgaaaatcgagagtcgagaacttttg
gctctcattgtaaaaacacctgcagaaaaagatgtacaaaagtgcattaattcgtttgtc
aataaaattattcaaaacaaagacttcaagaggattgaagaattgtcagagattgcacag
aatttctatcagggctttggaaagagaatggaaaacagtcctaattatgcaggaatttca
tcagaagttaaagaacgtctgcttgattatgttgaaagatacgctatgaccttgttgtac
agtaccttgttttgtcctcaatttaccacagatgaggataaagatttagccattcaaaat
aggataagacaattgaattgggtgagtggcaagcaccttgaatgtagaatacatgagacg
agtccagaagtacgtgaattggtttacacatcgataacagatttgttgaacatggattcg
gctaaagctccgcaggagaagctcgcctgcgtggtgcactgttgtcggaatatattttta
ctgcttcaacagtcggttggtggtccagcatcggcagatgaatttttgccagctttaatc
ttcatcgttctaaaagcaaatcctgcgagacttaaaagtaatattaattttataacaagg
ttttgcaacgctagcaaattaatgaccggcgaaggtggttactactttacaaatctctgc
tgtgctgtttcattcgttgagaatcttactgcagaatctctaaatatgtcgcagaaagat
ttcgatgcttacatgtccggagaaagagtgccagcgaatacctgggaatctgcactcaca
atatgtgaaagtcttcatctcatgtgtgaagaagttacgttgctcgacgagttaaaagtg
aaaaatgaaaacatcgtaaaagaagcgctagaattgaagaaagaatggctcgaatttcac
gacaaaattaagactgaaatcagtgctctggtggagagaaccccgctcattatatcgcgg
agccaacgaatcccaacgaatttagattgcgaacttgatttggaaagttatcaattgcca
cctcctataatacctcagattttttctcacatggctaacgaggaaacggacagtttaacg
gttggagcacgaacgtcggacggaaaagcatcgtcttcttcgaccgaagattgcggctgt
ataacaccatcgccaacttttgattttcctccattcagcgacgattgttgtctcgataga
agtcgtgccgacgacgaaaccagtctcataagtctagaaacacaatctgattttatgatg
ggcaatgaaactcaagctcaatccgacgacagatcgattgctgatagtctcctcgataat
tcgccccagaaccaggctaccaatttaccgtcaccactcaaacccgcaccacgtaaatca
tctaatttggcggaagattatcacggatttactcttcagggctcgaccatacaaacaatt
ccttgtgatactggcgatctctcacacgctacggatcacgaatcagatccatattccact
tattaccaaaatatataa
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