Venturia canescens: 122408785
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Entry
122408785 CDS
T09386
Name
(RefSeq) general transcription factor IIF subunit 1 isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
vcan
Venturia canescens
Pathway
vcan03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122408785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vcan03021
]
122408785
Transcription machinery [BR:
vcan03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
122408785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
122408785
NCBI-ProteinID:
XP_043271759
LinkDB
All DBs
Position
1:complement(33405513..33409239)
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AA seq
549 aa
AA seq
DB search
MTSSSIVKPQVGPSVQEFSIRVPKNTDKKHNVMRFNATLKVDFSEWTQVKMERENNMKEY
RGVEEEMPKFGAGSEFGRDAREEARRKKFGITSRKYKPEDQPWILKAGGRTGKKFKGTRE
GGVSENAAYYVFTHAPDGAIEAFPLHEWYNFQVIQRYKALSAEEAEQEFSRRNQVMNYWS
LMCRKRLRNDEDGGDDDGELAEAGRKAGKKPTKKEKELKISEMDEWMESDDDDDDSDSDA
DKEKKKAAASDEEINTKKKKGKNVPAKKKKKKNASDDEAFEESDDGDEEGRECEYISDST
DMESENEQHSTVKSVAEEDALRKLLASDEDDDDEEQNEKKEGEDDGSSDAEAKDKDDKEN
DKSTKDADKKTKEKKKKKKQSKKKDMKKASPTKDSSSDFSSDSGSDSDIATKEKENNRKP
NSAHSSRSATPTPITGSAAVNDQHKRKLTSSPDLSQSKKLKLDNFNLVPSTSYIPGSSES
GITEDAVRRYLMRKPMTTTELLQKFKSKKTGLTSEQLVNVMTQILKKINPTKQTFKNKMY
LSIKAQPSL
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgacaagttcatcaatcgttaagcctcaggtcgggccgtcggttcaggagttcagcatc
agagttcccaagaacacagacaaaaagcacaatgtgatgcgtttcaatgcaactctaaaa
gtggacttttccgagtggacgcaagtgaaaatggagcgagaaaacaacatgaaagagtac
agaggtgtagaagaggaaatgccgaaatttggtgctggctcagaattcggcagagatgct
agagaagaagctcgaaggaagaaatttggaattacaagtaggaaatacaaaccagaggat
caaccttggatactgaaagctggtggacggacgggaaaaaaatttaaaggcacaagagaa
ggtggagttagcgagaacgcagcttattatgtattcactcatgcaccagacggtgctatc
gaagcttttcctcttcatgagtggtacaattttcaagtgatccagcggtataaagctttg
agcgcggaagaagcagagcaagagtttagtcgaagaaatcaagtaatgaattattggtcg
ttgatgtgtcgtaagcgattgagaaacgatgaggatggtggtgatgacgatggagagctc
gcagaggctggtagaaaagctggtaagaaaccgacaaaaaaagaaaaagaattgaaaatt
tcggaaatggatgagtggatggagagcgatgatgatgacgatgattccgacagcgatgct
gataaagaaaaaaagaaagcagcagcttcagacgaagagattaatacgaaaaagaaaaaa
gggaaaaatgttccagcaaagaagaaaaaaaagaagaacgcgtcggacgatgaagctttc
gaagagagcgatgacggggatgaagagggtcgggaatgtgaatacatttccgattcgacg
gatatggaatccgaaaatgaacagcatagtactgttaaatccgtcgctgaggaggatgct
ttgagaaaattactcgcatcggatgaggacgatgacgatgaggaacagaatgaaaagaaa
gagggcgaggatgacggttcgtcggacgctgaggctaaggacaaagatgataaagaaaat
gacaaatccaccaaagacgctgataagaaaacaaaggaaaagaaaaagaagaaaaaacaa
tcaaaaaagaaagacatgaaaaaagcgagccccaccaaagattcgtcgagtgatttctcg
agcgattcaggctcggattctgatatcgctaccaaagagaaagagaacaatcgaaagcca
aacagtgcacacagctcacgatcggcgactccgacacctataaccggctcggcagcagtt
aatgatcagcataaaagaaaactaacaagctcaccggatctttcgcaatcgaaaaaactc
aaactcgacaatttcaatctcgttccttcgacttcttatattccaggcagcagtgaatct
ggaataaccgaagacgcagttcggcgatatctcatgaggaagcctatgacaacaacggag
ttactgcaaaaattcaaatcgaaaaaaactggtttgacatccgagcaactcgttaacgtt
atgacccagatcctgaagaagatcaatcctacaaagcaaacgttcaagaacaagatgtat
ctatcgataaaggctcagccgagcttgtaa
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