Venturia canescens: 122409031
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Entry
122409031 CDS
T09386
Name
(RefSeq) DNA mismatch repair protein Mlh1 isoform X1
KO
K08734
DNA mismatch repair protein MLH1
Organism
vcan
Venturia canescens
Pathway
vcan03430
Mismatch repair
vcan03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
122409031
03460 Fanconi anemia pathway
122409031
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcan03400
]
122409031
DNA repair and recombination proteins [BR:
vcan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
122409031
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
DUF7813
Motif
Other DBs
NCBI-GeneID:
122409031
NCBI-ProteinID:
XP_043272174
LinkDB
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Position
1:complement(26446936..26452001)
Genome browser
AA seq
920 aa
AA seq
DB search
MEKPAKIKKLDEVVVNRIAAGEIIQRPANALKELIENSLDAKSTNIQITVKEGGLKLLQI
QDNGTGIRKEDMEIVCERFTTSKLQNFDDLKSIETFGFRGEALASISHVALLTITTKTAE
EKCAYKASYIDSKLKGAPKPCAGNQGTTILIENLFYNVATRRKALSSAAEEFTKIADVVT
RYSVHNPKVGFTLKKQGEVLPQVRTPHNSTKMNNVKLLYGNPVARELLEVEAENDSYKFK
IHALITNPNYTSKRMTFLLFINNRLVDSTPIRKMVEELYSIYLPKKMHPWCYISLDINPN
NVDVNVHPTKHEVRFLHEDVIIEKIKIILDEKLSSNNASRTFYLQARMPQVNITKGTLEE
VLPEFDKDNGESTKKIHAREMIRTSSSDQKLDKFNFTVHSDRAKGSQNTSRDLDSDKECN
ISVDPKDFETELQNEHCTITTACGISTNSARDNIVDVEKIRSTENIEKSRDECVLKQTDT
EKNSNAFSMIEINLENMDDVLLTMIEDGLEKTNQKKNKATRILLPKETPKDIESLTNQDK
SNWSNLISDTTSIDSLEMGMKASDNVVTSTQTEKIDTSSILDPPNAEDDSSSDVPSEPVP
ISEAADRALKIVYKYYGTQENIESSSKRCENFQESDVENETVQRKNIAASEADTISSSEG
TITPVSSGFKSYSVNKFRIQVKLHSILTLRKEIEDNYHEGLRDILSNIIFVGSVDEKSAL
VQSGLNLYICDTMKLAEELFYEIMLYDFENYGVFKFSQPLPLDELALLGLETEGTGWTEE
DGPKDEIAARVKELLLEKADLLNDYFSINIDKRGNIKSLPVLLDKYIPYEAELPLYILRL
ATEVDWTAEKVCFDGICRETAKFYSHVNTSNEAQDWKHVVEHVLYPAIKESLLPPKCFAH
DSTILQIASLPDLYKVFERC
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaccggcaaaaattaaaaaactcgatgaagtagtagtcaacagaatagcagcc
ggtgaaattattcaaagaccggcaaacgcattgaaagaacttatcgaaaacagtcttgat
gccaaatccacaaatattcagatcacagtaaaagaaggtgggcttaaattactacagatt
caagacaatggaactggtattagaaaagaagatatggaaattgtgtgtgagcgattcaca
acgagcaaactccaaaattttgatgacctcaagtcaattgaaacttttggatttcgtgga
gaagctttagccagtataagccatgtcgcacttttaaccatcacgacaaagactgcggaa
gaaaagtgtgcctacaaagcttcttatatcgatagcaaactaaaaggagctcctaagcct
tgtgctgggaatcaaggcacaactattctcattgaaaatctattttacaatgttgccacc
cgacgaaaagctctttccagtgcagctgaagaatttacaaaaatagctgatgttgtgact
cgttattcagttcacaaccccaaagttggttttactctgaaaaaacaaggcgaagttctt
ccacaggttagaacaccccacaactccacgaaaatgaataacgtcaaactactatatgga
aatccggtcgcccgtgaacttttggaagtagaggctgaaaacgactcgtataaattcaag
attcatgcacttattacaaatccaaactatacaagcaagcgcatgacatttctactattc
attaataatcgactggtcgattcaacgcctatacgaaaaatggtagaggaactttattcg
atctacctgccaaaaaaaatgcatccttggtgttacatatctttggatataaacccaaac
aacgtggacgttaatgtgcatccgacgaagcacgaggtacgatttcttcacgaagacgta
ataatcgagaaaattaaaatcattctcgatgaaaaattatcaagcaacaatgcgtccaga
acattttacctccaagctagaatgccacaggttaacatcacaaagggcacactggaagaa
gtgttgcctgagttcgacaaggataatggcgaaagtacgaagaaaattcacgctcgcgag
atgatacgcacgagttcgtccgatcaaaaattagacaaatttaacttcacggttcatagt
gatagagcaaaaggttcgcaaaatacatcgcgcgatttagactctgataaagaatgcaat
atatctgttgatccaaaagattttgaaacagaacttcagaacgaacactgcacaattaca
acagcatgcggtataagtacaaattctgcgagagacaatattgtagatgttgagaaaatt
aggagcacagagaatatagaaaaaagtagggatgaatgtgtgttaaaacagacggatacg
gaaaaaaacagtaatgcattttcgatgattgaaataaatctggagaacatggatgatgtt
ttactcacgatgatagaggacggtttggaaaaaacaaatcaaaagaaaaataaggctaca
cgcattttactgccgaaagaaactccaaaagatattgaaagtttaacaaatcaagataaa
tcgaattggagtaatctcataagcgatacaacttctattgattcgctcgaaatgggtatg
aaagcttcagataacgtcgtcacgtcgacgcaaacagaaaaaatagatacatcgagcatt
ttggatccaccaaacgcggaagatgattcgtcctctgacgtaccaagcgaaccagtaccg
atctctgaagctgctgatcgggcattaaaaattgtttacaaatactacggaacccaagaa
aatattgaatcgagcagcaagcgttgcgaaaatttccaggagtctgacgttgaaaatgaa
actgttcagagaaaaaatatcgctgcatcggaggcagatacaatttcttccagcgaagga
acgataacacccgtatcgtcgggattcaagtcatactccgtcaataaatttcgtattcaa
gtcaaattgcacagtattttaacactcagaaaagaaattgaggataattatcatgaagga
ctccgcgatatactttcaaatataattttcgttggtagcgtcgatgaaaaatcggccctt
gtacagagtggccttaatctctatatctgtgacaccatgaaactcgcggaagaactattt
tatgagataatgctgtacgatttcgagaattatggagtattcaaattttctcaaccatta
cctctcgacgaattggcgcttttgggtttggaaactgaaggaacaggatggactgaagag
gatggaccgaaagatgaaatagcagccagggtgaaagaactgcttcttgaaaaggcagat
ttactaaacgattacttctcaattaatatcgataaaagaggaaatataaaatcattacca
gtattattagataaatacattccatatgaggcagagctcccactttacatacttcgtctc
gcaactgaagttgattggacggcggaaaaggtgtgtttcgacggtatttgtcgagagaca
gctaagttttacagtcacgttaacacaagtaacgaggctcaagattggaaacacgtagtt
gagcacgttttgtatccagcgataaaagaaagtcttttaccacccaaatgctttgctcac
gattcgacgatacttcaaatcgccagtttgcccgacttgtacaaagtgttcgagaggtgc
tga
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