Venturia canescens: 122409117
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Entry
122409117 CDS
T09386
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 1 isoform X1
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
vcan
Venturia canescens
Pathway
vcan00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
vcan01100
Metabolic pathways
Module
vcan_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
122409117
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
vcan01003
]
122409117
Enzymes [BR:
vcan01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
122409117
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
122409117
Glycosyltransferases [BR:
vcan01003
]
Glycan extension
O-Glycan
122409117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Motif
Other DBs
NCBI-GeneID:
122409117
NCBI-ProteinID:
XP_043272313
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All DBs
Position
4:complement(16725423..16821025)
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AA seq
693 aa
AA seq
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MTKLPPSRPPIIKRSRDTMLRVLGVRLLARMLVLVCSLSLLSLLFLSRCGFNNLDTELID
TAGPITAASLLEASQREEETRLEVERLTAEIRTLKLQILQLTGGPPGHSETASIINSSDV
GDCLAARRQIDLAEISQGLPLNNEYELIPFSHFTFSRLYPVDLGLGKRVVEKPIGFKRKD
LLEALTKAIESLNKNVSSLSGRYTLEDFLEGLYRVEPTTGTQYEMYFRTKNLNKSSAQQV
SSSSGFTKITMMRPYAPIHYVSLQRQQPTREKELIHIILPLSGRTGTFQSFMDKFVKIGL
KNDRRVHLTVVYFGTEGLSEARAIMSRVLMTRGTGGTNQNLRLLALNETFSRGKGLRVGA
ERAWGGEGDVLLFMCDVDVVFSARFLDRCRWNTAPGRKVYYPIVFSLYNPHVVYTLQGRE
VPPETDQLVISRDTGFWRDFGYGMTCQYRSDFLRVRGFDEDIVGWGGEDVTLYRKYVRSN
IKVIRATDPGIFHIWHPKHLPHGSLEGEHADLGIARAHSLGKMSGKPEIPETWPSFSSPS
PARGLYFHEVFALKRIPQTSKRFMLPGPPRANDEIKMSVSVLVAYGTSQLSSVPFFSPLL
SHLRDYIFVSCGAPHRTGGFFYDTPSCTRYFTPESFKIFNIIMVIVVGIIEKVAEVTHQF
HYSSFLLLHTRSSYFYILFSSKATTPPSTKTIR
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaacttccgccttctcgtcctccaattatcaagcgaagcagagacacgatgttg
cgcgttctgggagttaggctgctggcgaggatgctcgtcctcgtgtgttctctctccttg
ctctctctcctgttcctcagccggtgtggtttcaacaatctggatacggagctcatcgac
accgcaggcccgattacggcagcgagtttactcgaggcgagccagcgggaggaagagacg
cggctcgaggtggagagactcactgctgagatccgaacgttaaaacttcagatactccaa
ctgacaggcggtccaccgggacacagcgaaacagcgagcataataaactccagcgacgtt
ggggactgtttggcagcgagacgtcaaatcgaccttgcagaaatcagccaaggtctcccg
ttgaacaacgagtacgagctcatccccttcagtcacttcacattttcgagattataccca
gtggacctcggcttgggcaagagagtcgttgaaaaaccgataggttttaagaggaaggac
cttctcgaagcattgacaaaggccatcgagagccttaacaagaatgtatcctcgttatcc
gggcgctacaccctcgaggactttctcgagggtttgtacagagttgagccaacgaccggt
actcaatacgagatgtattttcgaacgaaaaatttgaacaaaagctcggcacagcaggtc
tcgagcagttctggtttcacgaaaatcactatgatgaggccttacgcaccgattcattac
gtttcgttgcaacgccagcaaccgacccgtgagaaagaattgatccacattattctaccg
ctgtccggtcgcaccggcacctttcaaagcttcatggacaaattcgtgaaaatcggcctg
aaaaatgatcgaagagtccatctaacggttgtttactttggcaccgaaggcctctccgaa
gcaagggccataatgtcaagagtgctcatgaccagaggcaccggcggcaccaatcaaaat
ctccgtcttctcgctctcaacgaaacattctctcggggcaaaggcctcagggttggtgct
gaacgagcctggggtggcgagggtgatgtattgcttttcatgtgcgacgttgatgttgtc
ttcagtgccaggtttctcgatcggtgtcgatggaacacagccccgggtcggaaggtctac
tatcccattgtctttagtctctacaatcctcatgttgtatatacgctccagggtcgtgag
gtgccacctgaaacggatcagctagtgatttccagggacactgggttttggagagacttt
ggctatgggatgacgtgtcaatacagatccgatttcctgagagttcgtggcttcgacgag
gacatcgttggctggggcggggaggatgtgaccctgtatcgaaagtatgttaggagcaat
atcaaggtgattcgggcgacggatcctggaatatttcacatttggcatccgaagcatctt
cctcatgggagcctggagggcgagcatgcagacctcggcatcgcgagagcacacagcctt
ggcaagatgtcaggcaaaccggaaataccagagacttggccgagtttttcctcgccctcc
cccgcccgcggtctctattttcacgaggtattcgcgcttaagcgtataccacaaacgagc
aaacgttttatgctccccggcccaccccgggccaacgacgagataaaaatgtcggtatcc
gtacttgtcgcatatggcacttcccaactctcttccgttccttttttctctcctcttctt
tcgcatttacgtgattatattttcgtgtcttgcggcgctccgcatcgcaccggaggattc
ttttatgacacgccgagttgcacacgctacttcacacccgagtccttcaagattttcaat
attattatggttatcgtcgttggtataatcgagaaagtagctgaagtaacgcatcaattt
cattactccagtttcttgttacttcacacgagatcatcgtatttttacatacttttttca
tcgaaggctacaacaccaccgtcaacgaaaactatacgatga
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