Venturia canescens: 122409189
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Entry
122409189 CDS
T09386
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit-like isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
vcan
Venturia canescens
Pathway
vcan04519
Cadherin signaling
vcan04620
Toll-like receptor signaling pathway
vcan04624
Toll and Imd signaling pathway
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
122409189
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
122409189
04624 Toll and Imd signaling pathway
122409189
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcan03000
]
122409189
Transcription factors [BR:
vcan03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
122409189
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank
Ank_2
RHD_DNA_bind
Ank_4
RHD_dimer
Ank_3
Ank_5
Ank_KRIT1
Death
Phage_Bbp19
Motif
Other DBs
NCBI-GeneID:
122409189
NCBI-ProteinID:
XP_043272463
LinkDB
All DBs
Position
4:complement(3745264..3752192)
Genome browser
AA seq
899 aa
AA seq
DB search
MPVLDDMEIVQTAFNELCNPFEMGSNTAQRVLSVNGYFNIMESQTMSSVSSPMSMSLSPQ
TDESSSNMFAMNDESFMNFTNSTAIELPAPRVVILDQPVDKFRFRYKSEMMGTHGCLSSA
STKSRRKRQAPTAKLINFVGQKAKIRCTLVTSDPDRRMPHAHHLVKREGNSENEAPYEIE
VSAENDFIAQFHGMGIIHTAKKNIKTELVRKMMAEALEKHRCKNRNITSLRVSEETQIKM
DADAAQKWMNLNSVSLCFQAFVEDDYGIMKPITEPTYSIAINNLKSALTGELKICRIDKF
SSPCEGGEEVFMLVEKVGKKNIKVKFFEVDENDHEIWSGYGRFSELDVHHQYAIVFKTPP
YNREITAPKEVYIKLERPTDGDFSEPIKFTYKPRDCIFNKKRPRISYSGSSELSSIKQST
NNMNLTSNGSFENASQELIKWLGAQNKLTSDEYAKFLNSIDIPEYAKTLDQAEYDSMLTT
DGGSSQNNEANFAENLVLSTMKKIEKTPTKVKDLFTKMFEERSTYGDTALHSALRHGQRE
IVKHILVMLASDPDLSSLVHVKNSSGKTPLHYAVLLNQPEVVKALLLLGADPNERDDRDF
YPLYYAVKSPEAGACVDALLSKTVKLSIRDDAGWTLLQLAVEAGSIHAVKSLIKAGADVN
ETEVSYGRTALHIAVENGHTEIVKYLLEKTDIDVNKTNLGGNTALHSAVVNPGDLAKEMC
KLLVEHGADPFMPNNSKEPMEEDDDKDLAVSVKEEIYCDETMEEDGGQTSIDLASNKPEI
LRLLTKGGESSATITNASTVEIKEEVADVDDTLSEHLDTILLDKLAIILDRNRSWERLAK
HLKCEYLLSTIDAEQSSPSMIILNYADIQGNLTRSSLINILTEIGEKKAASFIEQMTSP
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgttggatgatatggaaatagtgcaaacagcgttcaacgaactttgcaatcca
ttcgaaatgggatctaatactgctcagagagtgctcagtgtaaacggatatttcaacatt
atggagtctcaaactatgagtagtgtctcgtctccgatgtcaatgtctctttcgccacag
accgatgaatcgagttccaatatgtttgccatgaacgatgaaagttttatgaactttacc
aattccacagcaattgagttacccgctcctcgagttgttatactggatcagccggtagac
aaattcagatttcgatacaagtcagaaatgatgggtactcatgggtgtttatccagtgct
agtacaaagtcaagaagaaaaagacaagctcctactgcaaagctgatcaactttgtgggt
caaaaggcaaaaatacgctgcacactggtgacttcagatccagacagacgaatgcctcat
gctcatcatttggttaagcgggagggcaattccgaaaatgaagcaccttacgagattgaa
gtttcagccgaaaatgattttatagctcaattccatggcatgggaataattcatacagca
aaaaaaaacatcaaaacggaactcgttagaaaaatgatggcagaagccctcgaaaagcac
agatgtaaaaatcggaatattactagtttgcgtgtttccgaagaaactcagatcaaaatg
gatgcggatgctgctcaaaagtggatgaacttgaatagtgtttcgttgtgttttcaagct
tttgttgaagatgattacggaattatgaaacccataacagaacccacgtattcaatcgcc
atcaacaaccttaaaagtgccctgaccggagaattgaaaatttgtcgcattgacaaattt
tcgagtccatgcgaaggtggcgaggaagttttcatgctcgttgaaaaagttggaaaaaag
aacataaaagttaaatttttcgaggtcgacgaaaatgaccatgagatatggtcaggatac
ggacgcttttctgaattggacgttcatcatcagtacgccatcgttttcaagacaccacca
tataatagggaaattacagctcctaaagaagtttacataaaactagaacgaccaaccgat
ggtgacttttctgaaccaataaaattcacgtacaaaccaagagactgtattttcaataaa
aaacgaccgcgaatttcgtactccggaagttctgaattgagtagtattaaacaaagtaca
aacaacatgaaccttacgtcgaacggatcgtttgagaatgcctcgcaggaactcataaaa
tggcttggtgctcaaaacaagttgacgtctgatgaatatgctaaatttctcaactccatt
gatattcctgaatatgcaaaaactctggatcaggccgaatacgattccatgttgaccaca
gacggaggttcttcacaaaacaacgaagcgaatttcgctgaaaatttggtactttcaacc
atgaagaaaatcgagaaaacgccaacgaaagtaaaagatctattcactaaaatgtttgaa
gaacgttccacttatggggacaccgcattacactccgctcttcggcacggacaacgcgaa
attgtcaaacatattctcgtaatgttagcaagcgatccagacttgagcagtcttgttcac
gtcaagaacagttcaggaaagacaccgttacattatgcggtcttacttaaccaaccggaa
gttgtgaaggctttacttttactcggagcagatccgaatgagcgcgatgatcgtgatttt
tatccgctttattacgcggtcaaaagtcctgaagcgggtgcgtgcgtcgatgctctgtta
tcgaaaacagtgaaattgtcgattcgagatgacgctggctggactttgctacaattggcg
gtcgaagctggatctattcacgcagtcaaatctttgataaaagctggtgccgatgtgaac
gagactgaggtttcgtacgggcgcaccgccctccacatcgcagtcgaaaatggtcatacg
gaaatcgtcaagtaccttttggaaaagacggacatagatgtcaacaagacgaacttggga
ggtaacaccgcgttgcatagcgctgtcgtaaacccgggagatctggcaaaagaaatgtgc
aaactattggttgaacacggagcagatccgttcatgccgaacaacagcaaagaacccatg
gaagaggatgatgacaaagacttggcggtgagcgtcaaagaagaaatttattgcgatgaa
acaatggaagaggatggtggtcagacctcgatagatctcgcatctaataagcctgagatt
cttcgattgttgactaaaggcggtgaatcttctgcgaccatcacaaacgcctcgacagta
gaaataaaagaggaagttgcggacgtcgatgatacgttgtcggaacacttggacacaata
ctgctcgataaactcgctattatacttgatcgaaatcggagttgggagagactggcgaaa
catctgaaatgcgagtatcttttgagtactatcgatgccgaacaatcgagtccatcgatg
atcattcttaattacgctgatatccaagggaatttgacgagaagcagtttgatcaacatc
ttgactgaaatcggcgagaaaaaagcggcttcgttcatcgaacaaatgacgagtccttga
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