KEGG   Venturia canescens: 122409248
Entry
122409248         CDS       T09386                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
vcan  Venturia canescens
Pathway
vcan03030  DNA replication
vcan03410  Base excision repair
vcan03420  Nucleotide excision repair
vcan03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:vcan00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    122409248
   03410 Base excision repair
    122409248
   03420 Nucleotide excision repair
    122409248
   03430 Mismatch repair
    122409248
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vcan03032]
    122409248
   03036 Chromosome and associated proteins [BR:vcan03036]
    122409248
   03400 DNA repair and recombination proteins [BR:vcan03400]
    122409248
DNA replication proteins [BR:vcan03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    122409248
  DNA Replication Termination Factors
   ELG1-RFC complex
    122409248
Chromosome and associated proteins [BR:vcan03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    122409248
DNA repair and recombination proteins [BR:vcan03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     122409248
  Check point factors
   HRAD17(Rad24)-RFC complex
    122409248
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_lid_RFC1 AAA_14 AAA_22 RCF1-5-like_lid AAA_16 Rad17 Viral_helicase1 AAA_assoc_2 Mg_chelatase AAA_11 nSTAND_NTPase5 AAA_18 RuvB_N AAA_24 nSTAND3 ABC_tran NTPase_1 AAA_19 MeaB SNF2-rel_dom AAA_5 AAA_28 MipZ RNA_helicase DNAX_ATPase_lid IstB_IS21 SRP54 AAA_25 bpMoxR DUF851 AAA_23 AAA_29 ATPase_2
Other DBs
NCBI-GeneID: 122409248
NCBI-ProteinID: XP_043272586
LinkDB
Position
4:4258912..4261611
AA seq 351 aa
MAADEIVDESMEVDVVPSTSSTKNPKDDKFTKSLHLPWIEKYRPQVFTDIVGNEDTVERL
SLFARMGNTPNIIIAGPPGVGKTTTILCLARILLGPAFKESVLELNASNDRGIDVVRNKI
KMFAQKKVNLPQNKHKIIILDEADSMTEGAQQALRRTMEIYSNTTRFALACNNSEKIIEP
IQSRCAMLRYGKLTDAQVLAKVLEVCRKENVSYTDDGLDAIIFTAQGDMRQALNNLQSTH
NGFGHVNNENVFKVCDQPHPLAIKEMLEKCCVGDMSSAHQTLEYLWSMGYSAEDLITNIF
RVCKNLLIDEVLKLDFIKEIGMTHLGIVEGLNSLLQLDSLLARLCRRGLQK
NT seq 1056 nt   +upstreamnt  +downstreamnt
atggcagccgatgaaattgtagacgaatctatggaagttgacgttgtaccgtcaacaagt
agcacaaaaaatccaaaagacgacaaattcacaaaatctctgcatttaccatggattgaa
aaatatcgaccacaagtgttcactgacattgtgggtaatgaagatactgttgagagattg
tcattatttgcccgtatgggcaatacacctaatattattattgctggtcctcctggtgtg
ggaaaaacgaccacaattttatgtttggctcgaatactcttgggtcctgctttcaaagaa
tctgttcttgagctcaatgcttcaaatgatcgaggaatcgatgttgttaggaacaaaatc
aaaatgtttgcacaaaaaaaggtaaatttaccgcaaaataaacacaaaataatcatactg
gacgaggcagacagtatgaccgaaggagcgcagcaggctctgcgtcgcacaatggagatt
tacagtaacactacgagatttgctcttgcttgtaacaatagtgaaaaaataatcgaacca
atacagtcgaggtgtgctatgttacgttatgggaaactaacggatgcacaagtgttggca
aaagttcttgaagtttgcaggaaagaaaatgtctcatacaccgatgacggtttggatgct
atcattttcacggcacagggggacatgagacaagctttaaataatttgcaatctacgcac
aacggttttggtcacgtgaacaacgaaaacgtcttcaaagtttgtgaccagccacatcct
ctcgcgatcaaagagatgcttgagaaatgttgtgtcggtgacatgagttcggcacaccaa
actttggaatatctctggagcatgggatattctgccgaagatcttataacgaatatattt
cgcgtttgcaaaaatttactaattgatgaggtgctcaaacttgattttattaaggaaatt
ggaatgacgcatttaggaattgtcgaaggactgaacagtcttctgcaattagacagtctt
ttggcgcgcctttgtcgcagaggcttgcaaaaataa

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