Venturia canescens: 122409248
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Entry
122409248 CDS
T09386
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
vcan
Venturia canescens
Pathway
vcan03030
DNA replication
vcan03410
Base excision repair
vcan03420
Nucleotide excision repair
vcan03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
122409248
03410 Base excision repair
122409248
03420 Nucleotide excision repair
122409248
03430 Mismatch repair
122409248
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vcan03032
]
122409248
03036 Chromosome and associated proteins [BR:
vcan03036
]
122409248
03400 DNA repair and recombination proteins [BR:
vcan03400
]
122409248
DNA replication proteins [BR:
vcan03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
122409248
DNA Replication Termination Factors
ELG1-RFC complex
122409248
Chromosome and associated proteins [BR:
vcan03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
122409248
DNA repair and recombination proteins [BR:
vcan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
122409248
Check point factors
HRAD17(Rad24)-RFC complex
122409248
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_lid_RFC1
AAA_14
AAA_22
RCF1-5-like_lid
AAA_16
Rad17
Viral_helicase1
AAA_assoc_2
Mg_chelatase
AAA_11
nSTAND_NTPase5
AAA_18
RuvB_N
AAA_24
nSTAND3
ABC_tran
NTPase_1
AAA_19
MeaB
SNF2-rel_dom
AAA_5
AAA_28
MipZ
RNA_helicase
DNAX_ATPase_lid
IstB_IS21
SRP54
AAA_25
bpMoxR
DUF851
AAA_23
AAA_29
ATPase_2
Motif
Other DBs
NCBI-GeneID:
122409248
NCBI-ProteinID:
XP_043272586
LinkDB
All DBs
Position
4:4258912..4261611
Genome browser
AA seq
351 aa
AA seq
DB search
MAADEIVDESMEVDVVPSTSSTKNPKDDKFTKSLHLPWIEKYRPQVFTDIVGNEDTVERL
SLFARMGNTPNIIIAGPPGVGKTTTILCLARILLGPAFKESVLELNASNDRGIDVVRNKI
KMFAQKKVNLPQNKHKIIILDEADSMTEGAQQALRRTMEIYSNTTRFALACNNSEKIIEP
IQSRCAMLRYGKLTDAQVLAKVLEVCRKENVSYTDDGLDAIIFTAQGDMRQALNNLQSTH
NGFGHVNNENVFKVCDQPHPLAIKEMLEKCCVGDMSSAHQTLEYLWSMGYSAEDLITNIF
RVCKNLLIDEVLKLDFIKEIGMTHLGIVEGLNSLLQLDSLLARLCRRGLQK
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggcagccgatgaaattgtagacgaatctatggaagttgacgttgtaccgtcaacaagt
agcacaaaaaatccaaaagacgacaaattcacaaaatctctgcatttaccatggattgaa
aaatatcgaccacaagtgttcactgacattgtgggtaatgaagatactgttgagagattg
tcattatttgcccgtatgggcaatacacctaatattattattgctggtcctcctggtgtg
ggaaaaacgaccacaattttatgtttggctcgaatactcttgggtcctgctttcaaagaa
tctgttcttgagctcaatgcttcaaatgatcgaggaatcgatgttgttaggaacaaaatc
aaaatgtttgcacaaaaaaaggtaaatttaccgcaaaataaacacaaaataatcatactg
gacgaggcagacagtatgaccgaaggagcgcagcaggctctgcgtcgcacaatggagatt
tacagtaacactacgagatttgctcttgcttgtaacaatagtgaaaaaataatcgaacca
atacagtcgaggtgtgctatgttacgttatgggaaactaacggatgcacaagtgttggca
aaagttcttgaagtttgcaggaaagaaaatgtctcatacaccgatgacggtttggatgct
atcattttcacggcacagggggacatgagacaagctttaaataatttgcaatctacgcac
aacggttttggtcacgtgaacaacgaaaacgtcttcaaagtttgtgaccagccacatcct
ctcgcgatcaaagagatgcttgagaaatgttgtgtcggtgacatgagttcggcacaccaa
actttggaatatctctggagcatgggatattctgccgaagatcttataacgaatatattt
cgcgtttgcaaaaatttactaattgatgaggtgctcaaacttgattttattaaggaaatt
ggaatgacgcatttaggaattgtcgaaggactgaacagtcttctgcaattagacagtctt
ttggcgcgcctttgtcgcagaggcttgcaaaaataa
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