KEGG   Venturia canescens: 122409298
Entry
122409298         CDS       T09386                                 
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
  KO
K12828  splicing factor 3B subunit 1
Organism
vcan  Venturia canescens
Pathway
vcan03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vcan00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122409298
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:vcan03041]
    122409298
   03036 Chromosome and associated proteins [BR:vcan03036]
    122409298
Spliceosome [BR:vcan03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    122409298
 Complex B
    122409298
 Complex C
   U2 SnRNP specific factors
    122409298
Chromosome and associated proteins [BR:vcan03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    122409298
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N HEAT_ECM29 HEAT_2 Htt_N-HEAT_1 XMAP215_CLASP_TOG UME CEP104-like_TOG DUF2298
Other DBs
NCBI-GeneID: 122409298
NCBI-ProteinID: XP_043272689
LinkDB
Position
4:complement(14339604..14349041)
AA seq 1317 aa
MDAIPRTHEDIEAQIREIQSKKKEVQSATTEKEQVGLGKTGFYDQDIYDGTNNKYDGYVT
SIAANDEIEDEEYEPSTFSSNKRAGYNAPAALLNDVAQSEKGYDPFADRRRPTIADREDE
YRQKRRRMIISPERVDPFAEGGKTPDIGSRSYSEIMREQLLKGEETELKKKLAEKAKDGT
LKATNGEPKPAPKKRGRWDQTEDTPTVKKVASNSATPTSWDNADVTPAAIRWDETPGHGK
GGETPGATPGQSTRMWEPTPGHATPGAVTPGRETPSHDKIVSSRRNRWDETPKTERETPG
HNSGWAETPRTDRVAGDLIQETPTPSASKRRSRWDETPSNQTPGSMTPQTPATPLTTPHQ
TSILTPSGVTPTGPKAMGMATPTPGHLMSMTPEQLQAYRWEREIDERNRPLSDDELDALF
PPGYKVLQPPAGYIPIRTPARKLTATPTPMAGTPQGFFIQQEDKSAKFVDNQPKGNLPFM
KPEDAQYFDKLLVDVDEESLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFG
AGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDY
YARVEGREIISNLAKAAGLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSLLPF
LKAVCRSKKSWQARHTGIKIVQQIAILMGCAILPHLKSLVEIIEHGLVDEQQKVRTITAL
AIAALAEAATPYGIESFDSVLKPLWKGIRTHRGKGLAAFLKAIGYLIPLMDAEYANYYTR
EVMLILIREFQSPDEEMKKIVLKVVKQCCGTDGVEAQYIKDEILPHFFKHFWNHRMALDR
RNYRQLVDTTVEIANKVGASEIINRVVDDLKDENEQYRKMVMETIEKIMGNLGAADVDSR
LEEQLIDGILYAFQEQTTEDVVMLNGFGTIVNTLGKRVKAYLPQICGTILWRLNNKSAKV
RQQAADLISRIAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMT
KMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFELLELLK
AHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFT
VLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVCPLLEDALMDRDLVHRQT
ACAAIKHMALGVYGFGCEDALIHLLNHVWPNVFETSPHLVQAFMDAVDGLRVALGPIKIL
QYTLQGLFHPARKVRDVYWKIYNSLYIGGQDALVAGYPRIMNDPKNQYIRYELDYVL
NT seq 3954 nt   +upstreamnt  +downstreamnt
atggacgccattccgagaacacacgaagatattgaagcacagatacgcgagatacaatcc
aaaaagaaagaagttcaaagcgcaactactgaaaaagaacaagtaggccttggcaaaact
ggtttctacgatcaagacatttatgatggaaccaataataaatatgacggatatgtcacg
tccatcgctgcaaacgacgaaatcgaggatgaggagtatgagccgagtacattcagttcc
aacaaaagagcaggttacaacgcccctgctgctcttctcaacgatgtggcacagagcgaa
aaaggttacgatccattcgcagatcgaagacgtccaacaatcgcggaccgcgaggacgag
tacagacaaaaaagacggcgtatgataatttcaccagaacgagtcgatccatttgctgaa
ggtggcaaaactccggacatcggttcgagatcgtattcggaaattatgcgtgagcaattg
ctcaaaggcgaggaaactgaattgaaaaagaaattagcggaaaaagcaaaagacggtaca
ttgaaggcaactaatggcgagccaaaacctgcaccaaagaaacgtgggcgttgggatcaa
acggaggatacaccgactgtgaaaaaagtagctagcaattcagcgactcctacttcgtgg
gataacgctgatgttacaccagctgcgataagatgggacgagactccgggacatggaaaa
ggtggcgaaacgccaggagcgacaccgggtcaaagtacacgtatgtgggaaccgacacct
ggtcacgcaactcctggtgcagtaacgcccggacgagaaaccccatcgcacgataaaatt
gtctctagtcgacgaaatcggtgggacgagacacccaaaactgaaagagaaacaccgggt
cataatagcggatgggctgagacaccgcgtacagaccgagtggccggtgatttgattcag
gagacaccgacaccatcagcaagtaagcgtcgaagtcgttgggacgagaccccatcgaat
cagactcctggttccatgacacctcagacgccagcgacgcctcttacaacgcctcatcaa
acgtccattctgacaccgagtggtgttacaccgacaggaccgaaagcgatggggatggcg
actccgacaccgggtcatttgatgtcaatgacgccagaacaattgcaagcttatcgttgg
gaacgagaaatcgacgaacggaaccgtccgctttcagatgatgagcttgacgcactattt
cctccgggctacaaagtcctacaacctcccgcgggttacatacccattcgtacgccggca
cgtaaattgacagcaacgccaactcccatggccggcacgcctcaaggattttttattcaa
caagaggacaaaagcgccaaattcgtcgataatcaacccaagggtaatttgccattcatg
aaacccgaagacgctcagtacttcgacaaattactcgtcgacgttgacgaggaatccctc
agtccggaggagcaaaaggaacgaaaaatcatgaaattactattgaaaataaagaacggc
acgccccccatgcgaaaagctgcacttcgacaaatcactgataaagcccgcgaatttggt
gctgggccactttttaatcaaatattgccacttctcatgtcccctactctcgaagatcag
gaacgacatcttcttgttaaagttatcgataggatcctttacaagttagacgatctcgtt
cgcccctatgtccacaagattctcgtcgtaattgagcctctattgatcgacgaagattac
tacgctcgtgttgagggtcgtgagattatatcgaatctagcgaaagccgcaggtttagcg
acgatgatatcaactatgagacccgacattgataatattgatgaatacgtaagaaatacg
accgcccgagcgttcgcggttgtcgcttcggctcttggaatcccttcgcttttgcctttt
ctcaaagccgtttgtcggagcaaaaaatcttggcaagccagacacacgggtatcaaaatt
gtgcagcaaatcgctattcttatggggtgtgcaattttgccacacttgaaaagtttggtc
gagattatagagcatggcttggttgacgagcaacagaaagttcgaacgataacggctctg
gctatagctgctctggctgaagcggcgacaccctacggtatcgagagtttcgattccgtc
ctaaaacctctatggaaaggtataagaacacatcgtggtaaaggtcttgctgctttcctc
aaggctattggttatttgatcccactcatggacgccgaatacgctaattattataccaga
gaagtaatgctcattctcattcgagagtttcaatcgcctgatgaggaaatgaagaaaatc
gtactgaaggtcgtgaaacaatgttgcggaactgatggtgtcgaagctcaatatataaag
gacgaaatattgcctcactttttcaaacacttctggaaccatcgtatggctctggatcgt
cgaaattatcgtcaacttgtcgacacgactgtggaaattgctaacaaagttggagcttcg
gaaatcataaatcgcgttgtggatgatctcaaagatgaaaatgaacaatacaggaaaatg
gttatggaaactatagaaaaaattatgggcaatttgggagctgccgacgtcgactcgagg
ctcgaagaacagcttatcgacggaattctttacgcgttccaagaacaaacgaccgaggac
gttgtaatgctcaacggattcggaaccatagtcaacactctaggcaaaagagtcaaagca
tatttgcctcaaatttgcggaacgatactgtggcgtttgaacaacaaatccgcaaaagtt
cgtcagcaagctgccgatcttatttctcgtatcgctgtcgtcatgaaaacttgtcaagaa
gaaaaactgatgggccacttgggagtcgttctatacgaatatttgggcgaagaatatccc
gaagttttgggtagtattctgggagctttgaaagctattgtcaatgtaattggaatgacg
aaaatgacaccgccgatcaaggatttgttacccaggcttacaccaattttgaaaaacaga
cacgaaaaggtacaagaaaattgtatagatcttgtcggtcggattgctgaccgaggaccc
gaatacgtttcagccagagaatggatgaggatttgcttcgagttattggaacttctgaag
gcacacaaaaaagcaattagaagagcgaccgtaaatacttttggttacatagcgaaggcc
attggtccacacgacgttttggcgacgcttctgaacaatctgaaagttcaagaacgacag
aatcgagtatgtacgacggtggcgattgcgattgtggcggaaacttgtagtccgtttact
gttttgccagcattgatgaacgaatacagagttccggaattgaacgtgcagaacggagtt
ttgaagtcactctcgtttctctttgagtacattggtgaaatgggcaaagattatatttat
gccgtttgtccattgttggaggacgctcttatggatcgtgatcttgtgcatcgtcagaca
gcttgcgcagctataaaacatatggcgcttggcgtttatggttttggttgcgaagatgct
ctcatccatttgttaaatcacgtttggccgaacgttttcgaaacatcgcctcatcttgtt
caagcttttatggatgccgttgatggtctcagggttgctcttggaccgattaaaattttg
cagtacactctacaggggctctttcatcctgcgagaaaagtacgtgacgtttactggaaa
atctacaattcgctctacataggcggacaagatgcattagtagccggctatccacgaata
atgaatgatccaaaaaatcagtacattaggtacgagcttgattacgttttataa

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