Venturia canescens: 122409301
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Entry
122409301 CDS
T09386
Name
(RefSeq) DNA excision repair protein ERCC-6-like
KO
K10841
DNA excision repair protein ERCC-6
Organism
vcan
Venturia canescens
Pathway
vcan03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
122409301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vcan03036
]
122409301
03400 DNA repair and recombination proteins [BR:
vcan03400
]
122409301
Chromosome and associated proteins [BR:
vcan03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
122409301
DNA repair and recombination proteins [BR:
vcan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
122409301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
AAA_14
Motif
Other DBs
NCBI-GeneID:
122409301
NCBI-ProteinID:
XP_043272701
LinkDB
All DBs
Position
4:14349785..14355049
Genome browser
AA seq
1033 aa
AA seq
DB search
MIKREMDHRDILVGCVKTQIENLAGVSMETDDIQTEEQLKGIVTICSEESVTRAASSQLE
EALNRFNKNNQDHLTGNVVDNENEAAKEKSGLERQVQMGEVSPFKMAQITNASKSENKRN
FNEAFGLAGLENYLKKQAELSEQRKRLKNTKVTGMNKKESQKPCLQESASIQQKLSLDKQ
KKRIKKSLYREPEKTNHEISNPPNVTKESVRMSSKSNLSAVTGIDSDNQDSGSEYLPSDS
EIEEDDTSLKKKKSSRQGRKKSRKDVDRQNENSISGGSKILDDGDDAIYKERMEARLLEN
SSKDVLFTVENLFKVPKSIWKKLYKYQKVSIRWLWELHGRGLGGLMGDEMGLGKTVQVIA
FLAGLDVSELLSDGGRFRGLGPTIIVCPATLLEQWLRHFREWAPFLRVAVLHHSGTYRGT
PEDLIENIVTTGGILITSYSGVLQHKEALLESHWHYIILDEGHKIRNPEAKVTRTVKRFS
TPHRLLLTGSPMQNSLKELWSLFDFILPGKLGTQATFLEHCANPITRGGYANASPLQEAT
ALQVATMLKDAIAPYMLRRTKRDVQHHIKLPEKNEQVLFCSLTEIQKSLYKEYLRTDHVA
SVLHDKSNQSENSYRARLLVALTNLRKICNHPDLYSYGNENVNSDEELNLEEESVEDFGH
WKRSGKLVVVKSLLKIWKQQGHRALLFTQGRQMMRVLEALAQREGHKYLRLDGMTPMAQR
QQTIHKFNNDSSYFVFISTTRVGGLGVNLTGANRVVIYDPDWNPAVDAQARERAWRIGQD
KHVTIYRLITAGTVEEKIYHRQIFKLLLSNRILEDPRQRRLFQTSDLAELFNFNEPLDGT
ATESDRIFRDCKLEPKTALLKSNFSPLKIEAMKKLASSVSKKIEEIAKKTTEESKGQSPS
DAPIPKKGKSAEKNRKKYHKEKKNRKAKISAIFEGEEVPCLIGRKLERSETNEEEDISST
CDDQYVLKKLFSKTCVSSAIQHDAVLSGARSDGGESNPMNRMARDTAQESMDLLRQSRKW
CWRPTWDAPSNHE
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaagggaaatggatcatcgtgatatcctagtaggctgtgtcaaaacacaaata
gaaaatcttgctggagtttctatggaaaccgatgatatccagaccgaagaacaacttaaa
gggattgtcacaatttgttcagaagagagtgtgactcgtgctgcttcgagtcaattggaa
gaggcattgaacagatttaacaaaaataaccaagatcatttaactggcaatgttgttgac
aatgaaaatgaggctgccaaggagaaatcaggattggaaagacaagtacaaatgggtgaa
gtttcaccttttaaaatggctcaaattacaaatgcctcaaaatcagaaaataaaaggaat
ttcaatgaagcttttggcttggcaggcttggaaaattatttaaagaaacaagctgaactt
tcagagcaaagaaaaagattgaaaaacaccaaagtaactggaatgaacaaaaaagaatct
caaaagccctgcctccaggaatctgctagtattcaacaaaaactatctctcgataagcaa
aaaaaacgaataaaaaaaagtttgtatcgtgagccagaaaaaacaaatcatgaaatttcc
aatccacctaatgttaccaaagaatcagtaagaatgtcttccaaaagtaatctaagtgca
gtaactggtatcgattcggacaatcaagattcaggaagtgaatatttgccgagcgacagc
gaaattgaagaagatgatacatcattgaagaaaaagaaatccagtcgacaaggaagaaag
aaatctcgaaaagacgtcgatcgacaaaacgaaaattcaatttcaggtggttccaaaatt
ttggatgacggtgacgatgcgatttacaaagagcgtatggaggctcggttgctggaaaat
tcgtcaaaggacgtattgtttaccgtggaaaatttgttcaaagtaccaaaatcgatatgg
aaaaaattatacaagtatcagaaagtctcgatacgatggttgtgggaactccatggacga
ggcttgggtggtttgatgggtgatgaaatgggtctgggcaaaactgttcaagttattgct
tttcttgccggcttagatgtcagtgaattgctttccgacggtggaagattcagaggatta
ggtccaacgatcatagtttgcccggcaactttgctcgaacaatggttaagacatttccga
gaatgggcaccatttttaagagttgctgtccttcatcattcagggacttatcggggtaca
cctgaggatttgatcgaaaatattgtaacaacaggaggaattttaattacatcttactcc
ggtgtactccaacacaaagaggctttactcgaatcccattggcactacatcattttggat
gaaggtcacaaaattcggaatcctgaggctaaggtaactagaacagtaaaaagattttcg
acgcctcaccgcttacttctaactggaagtccgatgcaaaattccttaaaagaattgtgg
tccttgttcgacttcatattaccaggaaaattgggtacgcaggcgacttttcttgaacat
tgcgcaaatcctataactcgtggtgggtatgccaatgcctcacctctccaagaggctact
gctcttcaagtggcgaccatgcttaaagatgcaatagctccctatatgcttagaagaaca
aaaagagatgtccaacatcacatcaagttaccggaaaaaaatgagcaagtacttttctgt
agtctaacagaaatacaaaagagcctttataaagagtacttgaggacggatcacgtagct
tcggtccttcacgataaaagtaatcaatcggagaatagttatcgtgccagactgctcgta
gctcttacaaatttacggaaaatctgtaatcatccggatctttatagttatggaaacgaa
aatgtcaattctgacgaagaattgaatctcgaagaagaatcggttgaagattttggccac
tggaaacgttccggtaaattggtggtcgttaaatctttgctgaaaatttggaaacagcaa
ggacacagagcacttctattcacgcaaggccgacagatgatgcgcgtattggaagccctt
gcccaacgtgaaggtcataagtatctccgtctcgatggaatgaccccgatggcacagcgc
caacagacaatccacaaatttaacaatgattccagttatttcgttttcatatcaactacg
cgggtcggaggtctcggagtcaatctcactggagcgaatcgcgtcgttatttacgatcct
gactggaatccggctgtagatgcccaagcaagagaacgagcctggagaatcggtcaagat
aaacatgtcacaatttacaggcttatcactgctggcacagtagaagaaaagatttatcat
cgtcaaatcttcaaactattgttgtcgaaccgaatcctcgaggatccacgtcaacggaga
cttttccagacttccgatctcgcagaactctttaattttaacgagcctttggatggcaca
gcgaccgaatccgatcgaatatttcgtgattgtaaactcgaaccaaaaaccgcactttta
aaatcgaacttttctcctcttaaaatagaggctatgaagaagctcgcgtcttcagtcagc
aaaaaaattgaagaaatcgctaagaaaactactgaagaaagtaaaggacagtctccgagt
gatgcaccgattcctaagaaaggcaaatctgcagagaaaaatcgaaaaaaatatcataaa
gagaagaaaaataggaaggcaaaaatttcagctatcttcgaaggcgaagaagtaccttgt
ctgattggaagaaaacttgaaagatcagaaaccaatgaggaagaagatatttcttccact
tgcgatgatcagtacgttctcaagaaacttttttcaaaaacgtgcgtgagttcggcgatt
caacacgatgctgttctctcaggcgcgagatcggacggcggagaatcaaatccaatgaat
cgaatggcccgtgatactgcacaagaaagtatggatttgcttcgtcaatcaagaaaatgg
tgctggagaccgacttgggatgcgccgagtaatcacgaataa
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