Venturia canescens: 122409312
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Entry
122409312 CDS
T09386
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
vcan
Venturia canescens
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vcan04131
]
122409312
Membrane trafficking [BR:
vcan04131
]
Protein recycling
Others
EARP complex
122409312
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
DUF4037
DUF1381
Ipi1_N
Motif
Other DBs
NCBI-GeneID:
122409312
NCBI-ProteinID:
XP_043272711
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All DBs
Position
4:14972205..14977689
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AA seq
955 aa
AA seq
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MDRNKLGLSVKNSIMMEDLKCKFLGLINKQNQAKIPSMGLNPDLLNPIESQKSDETKSEA
GQSTESEAVTDQEILEAIETIYYRNDDKFDSCRHELEKLPEILDCREVEKYCKRLRQQQQ
VVSKKVLQLILQKQSACQEEFQRILKTEDQLGEMLQICRTGRSNLNLAKKQFTTASLGIL
ANYRKRQIVQELLNNLSTIKTLQRTEDRLQELLNEENFPGAISLLLECQSAAQTYKHFRC
VAALNGKLQDTLDQVEETLDMTLSKMCAQFEHRTYSSVQEAYKLLGKTQTAMDQLHMHFT
AAIHNSAFTVVHTYVGGDTKRQYKQICQSVERENFIMCLLDLCKSLWRILSSYYQVLNWH
GSNKSQSDTDEEKDPETTFNEQYVKQKLESGMVRMWHDVEIKISTFLIGTDLTSFKFEQF
VQVLGMVNRLTQVGDELCGSKSEILQESMRKQCLSYFSHYHASRLDELRIFLEHDGWELC
PVKSTFVASQLEEFKCLRPALNNCKNATGNSDAPCFTNEHENSVVGGDWLSNCVENGTSP
FDIAADETMEEDILSSIADEASGYYTEDSEDDTPEELKREFVDETDQTRSSKRKIRGKVQ
HGPMVTNTTLSVLRVCGRYLQMSRLLRSIAITVIQNMVQFFELCFYAIHAFFTSDLQINS
DSLYNPKLKLCLARIRETLIVNENPLSENRESERYKVHQPQLSTTVDLSKPSRLFGLTER
VVGVESLIFLGHQYECLRPYLEHLISVNGQQEQGFLNQFYSQTIASAVELRKPIFMAVAA
QALDVSVVLNLMNKVNWEVRDVMSQHSSYIDTLLMDMQAIDSRLEEIGQTIPLSSQVRAS
IWENVAHLITHTLVEGFSNAKKCSNGGRGLMQLDFTQLKSKFEKIASLRPMPHSEYVELY
IKAYYIPENTLEEWVKEHKEYSMKHLVGLVSCACQNNKKTRQRLIGLIEEQRSNR
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcaacaaattaggtctgtctgtcaaaaactctattatgatggaggatttgaaa
tgcaagtttttgggacttattaataagcagaatcaagccaaaattccttctatgggtctg
aatccggatcttctcaatccgatagaatctcaaaagtctgatgaaacaaaatcagaggcg
ggtcaatccacggagagcgaagctgtcacggatcaagaaatacttgaagcgatagaaaca
atttattatagaaacgacgacaaatttgactcatgcagacatgagctagaaaagttgcct
gagattttggattgcagagaggtggaaaaatattgcaaaagattgcgacagcaacagcaa
gtagtatcaaaaaaggtacttcaactaatattgcaaaaacagagtgcctgccaggaagaa
tttcaaaggattctgaaaaccgaagatcagcttggagagatgctgcaaatttgtaggact
ggcagatccaatctcaatcttgcaaaaaaacaatttaccactgccagtcttggcatactt
gctaactacagaaagagacaaatcgtccaggaattgttgaataatctcagcaccatcaaa
acattgcagcgcacagaggatcggctgcaagaacttttgaacgaagaaaatttccccggt
gcaatatcattgctccttgagtgtcaaagcgcggctcagacgtacaaacactttcgctgt
gtggctgcattgaatgggaagcttcaagatacgttggatcaagtcgaagaaacgttggac
atgactctctcaaaaatgtgtgctcaatttgaacaccgaacttattcatcagttcaggaa
gcatacaaacttctaggaaagacacaaactgcgatggaccaactgcacatgcattttaca
gcagcgatacacaacagtgcgtttacggtggtacacacctacgttgggggagatacaaaa
agacagtataagcaaatttgtcaatcggttgaacgagaaaatttcatcatgtgtttgctt
gatctgtgcaaatctctatggagaatactaagctcatattaccaagtactgaattggcat
ggttctaataaaagccagtccgatacagatgaagaaaaagatcctgaaactacatttaat
gagcagtacgttaaacagaaattagagagtggaatggtcagaatgtggcacgatgtggaa
ataaaaatttctacttttctcattggtaccgatcttacatcgtttaaattcgaacaattt
gtacaggttcttggcatggtcaacagattgacgcaagttggtgacgaactgtgtggcagt
aaatccgaaatactccaagaatcaatgagaaaacaatgtctttcatacttctcacactac
cacgcttcccgattggacgaattaagaatattcctggagcacgatggctgggaattatgc
cctgtcaaatcgactttcgttgccagtcagttagaagaattcaagtgtcttcgaccggct
ctgaacaattgtaaaaacgcaacgggcaattccgatgctccgtgtttcacaaacgagcat
gagaattccgtcgttggcggcgattggctcagcaattgcgttgagaatggtacatcgcct
ttcgatatcgcggccgatgagaccatggaagaagatattttatccagtatcgcggatgaa
gcttccggttattacaccgaagattccgaggacgatacgccggaagaactgaaaagagaa
tttgtggatgaaaccgatcaaacgagatcatcgaagcgaaaaattcgtggcaaggttcag
catggccccatggtcacaaataccactctcagtgtgctcagggtctgtggaagatattta
caaatgtcgaggcttctccgctcgatagctataaccgtcatacaaaatatggttcaattc
ttcgagctttgcttctacgcgatacacgctttttttacatcagatcttcaaataaacagc
gactccttgtacaatccaaaattaaaattgtgcctggcccgaattcgagaaactttaata
gtaaatgaaaatccgttgagtgaaaatcgagaaagtgaaagatacaaagttcatcaacca
caattatcgacgacggtcgatctcagcaaaccatcgagactgttcggcctcacggaacgt
gtcgtgggggttgagtccttaatatttctcggacatcagtacgaatgtttgaggccatat
ctcgagcatcttatctcggtcaatggacaacaggaacaaggatttctgaaccaattttac
agtcaaactatcgcttcggctgtcgaattacgtaaaccaatctttatggctgtcgctgct
caagctttagacgtttctgtcgttttgaatctcatgaacaaggtcaattgggaagtcagg
gatgtcatgtcacagcatagtagttacatcgatactctactaatggacatgcaagcaatt
gattctcgtctcgaagaaattggacaaacaatcccattatcgtctcaagtccgtgcctca
atctgggaaaacgtcgctcacttaataactcacactttggttgaaggtttttccaacgcg
aagaaatgctcgaatggtggccgcggtcttatgcagctcgattttacccaactgaaatca
aagtttgaaaaaattgcttctctgcgacccatgcctcacagcgaatatgttgaattgtat
ataaaagcttactacataccggaaaacactcttgaggagtgggtcaaagaacacaaggaa
tactcgatgaagcacttggtcggtctcgtttcgtgtgcgtgtcaaaataacaaaaaaaca
cgacagagattaataggtttgatagaggagcagcgttcaaacaggtaa
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