Venturia canescens: 122409324
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Entry
122409324 CDS
T09386
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
vcan
Venturia canescens
Pathway
vcan03020
RNA polymerase
vcan03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
122409324
09124 Replication and repair
03420 Nucleotide excision repair
122409324
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vcan03021
]
122409324
03400 DNA repair and recombination proteins [BR:
vcan03400
]
122409324
Transcription machinery [BR:
vcan03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
122409324
DNA repair and recombination proteins [BR:
vcan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
122409324
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
122409324
NCBI-ProteinID:
XP_043272731
LinkDB
All DBs
Position
4:22071444..22073458
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AA seq
276 aa
AA seq
DB search
MPYANQPSVHITDLTEENVKFQVEDTELSVANSMRRVFIAETPTMAIDWIQLEANSTVLS
DEFLAHRIGMIPLISDEVVERIQYTRDCSCPDFCPECSVEFTLDVKCTEDQTRHVTTADL
KSSDPRVLPVTSRHREDDASDYGETDEILIVKLRKGQELKLRAYAKKGFGKEHAKWNPTA
GVCFEYDPDNSMRHTLFPKPDEWPKSEYTELEEDQYEAPFNWEAKPNKYYFNVESSGALK
PENIVMMGIAALKNKLSNLQTQLSHEVQSDALSIHH
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgccgtacgctaatcaaccatccgtgcacataacggatttgaccgaggagaacgtcaaa
tttcaagttgaggatacagaattgagcgttgcaaatagtatgagacgtgtctttattgct
gaaacgccgacaatggcgattgactggattcaattagaagcgaattccacagttttgagc
gacgagtttcttgctcacaggattggtatgattccattgatcagcgatgaagttgttgaa
aggatccaatatacgagagactgtagttgtccagatttttgtccagaatgcagtgtggaa
ttcaccttggatgttaaatgtactgaagatcaaacaagacacgtaacaacagctgatctg
aaatctagcgatccacgagtcttgcctgtcacatcacgacacagagaagacgacgccagt
gattacggagagacagatgaaatattgatagtcaaattacgaaaaggccaagaacttaaa
cttcgagcatatgctaaaaagggatttgggaaagagcacgctaaatggaatccaactgct
ggagtttgtttcgagtacgatcctgataactccatgcgtcacacactcttcccaaagcct
gatgagtggcccaagtctgagtacacggaactcgaggaggatcaatatgaagcaccgttc
aattgggaagcaaagccaaacaaatattatttcaatgttgaaagcagcggagctctcaaa
cctgaaaatattgtgatgatgggaatagctgctttgaaaaacaaattgtctaatttgcaa
actcaacttagccacgaagtgcagagtgatgcactaagtattcatcactga
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