Venturia canescens: 122409371
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Entry
122409371 CDS
T09386
Name
(RefSeq) protein Tob1 isoform X1
KO
K14443
protein Tob/BTG
Organism
vcan
Venturia canescens
Pathway
vcan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122409371
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcan03019
]
122409371
Messenger RNA biogenesis [BR:
vcan03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122409371
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
122409371
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTG
ECM10
LIM_bind
HGTP_anticodon2
Motif
Other DBs
NCBI-GeneID:
122409371
NCBI-ProteinID:
XP_043272809
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All DBs
Position
4:18233867..18268941
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AA seq
501 aa
AA seq
DB search
MHIEVQVALNFVISYLYNKLPRRRVNIFGEELEKALKDKFKGHWYPEKPVKGSAFRCLKT
GDPVDSVLERAAKESGVPIKDILENLPAELAVWVDPGEVSYRIGEKSAIKILYSESADPH
DESSADREVTKTFNPEAQCFRPIEAVGTSLGGLSLSPKSTSPFPASLATSNGPTGPVNSA
TNPANNPPNGAHPSGSSSAPSPTPITNSFKGSPSPVPAFIPRTTAPLTFTTATFAQTKFG
STKLKTSSKRANRPSAFRMSPTEFSNYIKQRAMQQQIHHHHHHHQPQQQQQQQQQQQQQQ
PQQQQQQQQQQQQQQQQAGLPVSQNSPTSRSLSPGGIVGPQQQQQHSGADPSAYFFHGPY
HPHQFAHRNIFEPTNHGAATNVAAAAAAAAYIPDIYGAKFSSSYLDPTALGHQFYGASVS
NNGATNPPANTQVSTTGNLGPVGSTSNNAAVAAAAAAAAAAAATTTSQQDKAALVEGLNS
FGLGSVTHYPASQYQHLLVAN
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgcacattgaggtgcaggtggccctgaatttcgtcatatcttatttgtacaacaagttg
ccgaggcggcgggtcaacatattcggcgaagagctcgagaaagctctcaaggacaaattc
aagggtcactggtacccggagaaaccggtcaagggctcggctttcagatgtcttaagacc
ggcgaccccgtcgactcggtactcgaacgcgctgccaaagaaagcggcgtaccgatcaaa
gacatcctcgaaaatttacccgccgagctcgccgtctgggttgatcccggcgaagtcagc
tatcgcatcggcgaaaagagcgccattaaaattctctactccgaaagcgccgatccccac
gacgaaagctccgccgatcgagaagtcacgaagaccttcaatcccgaggcgcaatgcttc
aggcccatcgaagccgtcggcacttccctcggcggtctcagcctcagccccaaatcgacg
tcacccttcccagcctccctcgccacctccaacggacccaccggccccgttaactctgcc
acaaatcccgccaataatccaccgaacggggctcatccctccggctcgtcgtcagcgcct
tcgccaacgccgatcaccaactccttcaaaggatcacccagccccgtacccgctttcatt
ccccgtactaccgcgcctctcacattcaccaccgccaccttcgctcagaccaaattcggc
agcaccaaactcaagacgagcagcaaacgggccaacagaccgtccgctttcagaatgtcg
ccaaccgaattctccaactacataaagcagcgagcgatgcagcagcagattcatcatcac
catcaccatcatcaaccgcagcagcagcagcagcaacagcagcagcagcaacaacagcag
ccacagcagcagcagcagcagcaacaacagcagcaacaacagcagcaacaggccggttta
ccggtgtcccaaaattcgccgacgagtcgttccctctcgcccggtggaatcgtcggacct
caacagcaacagcagcacagcggggctgatccgagtgcctacttctttcacgggccgtat
catccgcatcagttcgcccatcgaaatattttcgagccgacgaatcacggggctgcgaca
aacgtcgctgcggctgcagccgccgcagcctatattcccgacatctacggggccaagttc
tcctcctcgtacctcgatccaaccgcccttgggcatcaattttacggggctagcgtgagc
aacaacggtgctactaatccacccgcgaacacccaagtttccaccaccggtaatctcgga
ccggttggttcgacgagcaacaacgcggccgtagcggccgcggctgctgccgccgcagct
gcagctgcaaccactacgagccaacaggacaaagccgcccttgtcgagggtctcaacagc
tttggccttggttccgtcactcattacccagctagtcagtatcagcatcttctcgtcgcc
aattaa
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