KEGG   Venturia canescens: 122409564
Entry
122409564         CDS       T09386                                 
Name
(RefSeq) THO complex subunit 5 homolog
  KO
K13174  THO complex subunit 5
Organism
vcan  Venturia canescens
Pathway
vcan03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:vcan00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    122409564
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vcan03019]
    122409564
   03041 Spliceosome [BR:vcan03041]
    122409564
Messenger RNA biogenesis [BR:vcan03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     122409564
Spliceosome [BR:vcan03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    122409564
SSDB
Motif
Pfam: FmiP_Thoc5 ATAD4
Other DBs
NCBI-GeneID: 122409564
NCBI-ProteinID: XP_043273169
LinkDB
Position
4:22811737..22815134
AA seq 668 aa
MGKETDPESPKKRRKTVTTAPGTPTKDGDMYKTIISYEEKEAMDRSPEEDSKNFLSCCET
VRRGMNEIAQLKASDDPSAKDQVRELQIQTSLAFLELKKLNRMEKFRTKFARDSLTAAKS
AVDSKHLQLQNLLYEVMHLKKEVIKCLQFKSKDESIELVSLEEFYREAPETILQKDITDM
NAHQLKLARLEWELMQRKQLAALCDELSDSKKGVASSIETKQERLDNLGPQLRTILEASK
PLQDSFGLPLDKIHQEHQKAALLVSPLYVLYAKTSAYRDAYEPLLCVSVEGDEDEAKRIN
NQENSQDSDSDQETQSESVVEEIPVHKKRHHRLSREARQEEKKMRLLQRHPLSVQIVITL
SNEIKLTLKFFYMTYLRVITVESKLDTKDCGGITAGDMLISESVLRELYPKDLGLDSPNP
ANNYQLMRHNLPSFDSLGVGIPYRWAQRMAGLHFLSLDVNEQKRTNQELAQDSTESVLRE
IKRRVKARLELCNEIKLLEEGHFPPVAIGTEPMPEKVVTEVHRFTTATWKSYSTSPDTLG
FCKKGLVTPVDMFYEAILRRGGYELIARIAIKPDYPKVSPVFSISLNPSIPSSIDVVRDI
EREVNVMWKKPPTLSLQLQRLRACFDIYLETEKLVPSREQIFFHSVKGRTRARPYKYVAL
GGGVFTQR
NT seq 2007 nt   +upstreamnt  +downstreamnt
atggggaaagaaactgatccggaaagcccgaaaaaaagaagaaaaaccgtgaccaccgct
cctggaactcctaccaaggacggagatatgtacaaaaccataataagctatgaagagaaa
gaagctatggataggtcaccagaagaagattcaaagaattttctttcctgctgtgagaca
gttcgcagaggaatgaatgaaattgcacagctcaaggctagcgacgatccaagcgctaaa
gatcaggtcagagaattacaaatccaaacatctcttgcatttcttgaattgaagaaactc
aacagaatggaaaagttcagaaccaagtttgcaagagattctttgacagctgcaaaaagt
gctgttgacagcaaacatctccaactacaaaacttgctgtatgaagtaatgcatctaaaa
aaagaagtcataaagtgtttacaattcaagtccaaagatgagtctatagaactggtgtcg
ttggaagaattctatagagaagcaccagaaactattttacaaaaagacataactgatatg
aatgcccaccagctgaaacttgctcgcctcgaatgggaattgatgcaaagaaaacaatta
gcagcgctgtgcgacgagctatcggacagtaaaaaaggtgttgcctcgagtatagaaacg
aagcaggagcgactggacaatctcgggcctcagcttcgtacgattctcgaagcgagcaag
cctcttcaggatagttttggtttgcctttagataagattcaccaggagcatcaaaaagct
gcattgctcgtttcgcctctgtatgtactttatgccaaaacttcagcatacagagacgca
tatgaaccacttttatgcgtgagcgtcgagggtgacgaggatgaggcaaaacgaataaat
aatcaggaaaattcccaagactctgattcggatcaagaaacacaatcggaaagtgtagta
gaagaaattccagttcataagaagagacaccacagattatcgcgcgaggcaagacaggaa
gagaaaaaaatgcgtctccttcagaggcacccgctgagtgttcaaatcgtcatcacttta
tccaatgaaatcaaactcactctcaagtttttctacatgacttacttaagagtcattacc
gtggaatcgaaattggatactaaagattgcggaggtatcacagccggagacatgctgatt
tccgagtcggtacttcgtgaattgtatccaaaagatctgggtcttgacagtccaaatcct
gcgaataattatcaactcatgcgacacaatcttccatcattcgattcccttggagtcgga
attccttatcgatgggctcaacgaatggctggactgcattttctgtcgttagatgtcaac
gagcaaaagcgaacgaatcaagaacttgcgcaggatagtacagagagtgttttacgagaa
ataaaacgacgtgttaaagcacgcctcgaattgtgtaacgaaataaaactattggaggaa
ggacattttccccctgtggcaataggaactgaaccgatgccggaaaaagttgtaacggaa
gttcatcgattcacgaccgcaacgtggaaaagttattccaccagtccggatactctgggc
ttctgtaaaaaggggctagtcacaccggtcgacatgttttacgaagcgatacttcgacgc
gggggatatgaattgatcgcacgaatcgccataaagccggattacccaaaagtctcaccg
gtattcagcataagtctgaatccttcgattccatcgtcgatcgatgtagttagagatata
gaacgtgaggttaacgtaatgtggaaaaagccgcctacactttcgttacaattacaacgt
cttcgcgcctgcttcgacatttaccttgaaacagagaaactcgtaccctcgcgcgagcag
atattcttccattcggtaaaaggacgaactcgtgctcgaccgtacaagtacgttgcgtta
ggagggggcgtattcacacaacgttga

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