Venturia canescens: 122409765
Help
Entry
122409765 CDS
T09386
Name
(RefSeq) N-glycosylase/DNA lyase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
vcan
Venturia canescens
Pathway
vcan03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
122409765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcan03400
]
122409765
Enzymes [BR:
vcan01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
122409765
DNA repair and recombination proteins [BR:
vcan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
122409765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
HHH_5
DUF2400
Motif
Other DBs
NCBI-GeneID:
122409765
NCBI-ProteinID:
XP_043273488
LinkDB
All DBs
Position
4:complement(22746398..22748360)
Genome browser
AA seq
332 aa
AA seq
DB search
MRIGRIACKRQELDLGITLNGGQSFRWLAIENGAKYRGVYSGCVWTFSQDDENLHYVLHN
SSINDETTCSNSLKKYFNLETSLRDSINEWSSCDAQFEKSCNNAVGVRILDQDIVENLFS
FICSSNNNIPRISSMVEKMCTHFGKKICQVDKKQYYDFPTIEALSQAKVENILRNEGFGY
RAAYIANAAKKLKELGGREWLNVLHKSKGGIYEKSRESLITLPGIGPKVADCICLMSLGH
LEAIPVDTHIFQVAREMYMPHLKNQKTVTPKIHEQVSTYLRKLWGPHAGWAQTIVFCSKI
GANEKKTVRRKQKNASDTKESTRSKKLKKTQT
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgagaattggaagaatcgcatgtaagagacaagaactggatctcggaataactctaaat
ggtggacagagttttcggtggctggccatagaaaatggggcaaaatatcgtggggtttat
tctggatgcgtgtggacctttagtcaagatgatgaaaatctccattacgttctacataat
tcatcgatcaacgacgaaaccacctgttcgaatagcctcaaaaaatatttcaatctcgaa
acctctcttcgggatagcataaacgaatggtcttcctgcgatgctcaatttgagaaatcg
tgcaacaatgctgtgggtgtgagaattctggaccaggatatagtggaaaatttgttctcc
tttatttgcagttcaaacaacaatattccaagaatttcgagcatggttgagaaaatgtgt
acacatttcgggaaaaaaatttgtcaagtggataagaagcagtattacgattttccaact
atagaagcattgtctcaggcgaaggtggaaaatatacttaggaacgaagggtttggatat
agagcagcgtacatagcaaatgcagcaaaaaaattaaaggaattaggtggtcgtgaatgg
ttgaacgttttgcacaaatcaaagggaggaatatacgaaaaatcgagagaatcgcttata
acgttgccgggtattggaccgaaggtcgcagattgcatctgtctcatgtcgctaggacat
cttgaggcgatcccagtcgatactcacattttccaagtggccagagaaatgtacatgcca
cacttgaaaaatcagaaaaccgtcacgccgaaaattcacgagcaagttagtacgtatttg
agaaaactttggggtccacacgctggatgggctcagaccattgttttttgctctaaaatt
ggtgctaatgaaaaaaaaacggttaggagaaaacaaaaaaatgcaagcgataccaaagaa
tcgaccagatcgaaaaaacttaaaaaaacacaaacatga
DBGET
integrated database retrieval system