Venturia canescens: 122409921 Help Entry 122409921         CDS       T09386                                  Name (RefSeq) protein similar isoform X1   KO K08268   hypoxia-inducible factor 1 alpha Organism vcan  Venturia canescens Pathway vcan04137   Mitophagy - animal vcan04140   Autophagy - animal vcan04148   Efferocytosis Brite KEGG Orthology (KO) [BR:vcan00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     122409921    04137 Mitophagy - animal     122409921    04148 Efferocytosis     122409921  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:vcan03000]     122409921 Transcription factors [BR:vcan03000]  Eukaryotic type   Basic helix-loop-helix (bHLH)    Factors with PAS domain     122409921 SSDB OrthologParalogGFIT Motif Pfam:  bHLH_HIF1A PAS_3 PAS_11 PAS PAS_9 PAS_4 HLH Motif Other DBs NCBI-GeneID:  122409921 NCBI-ProteinID:  XP_043273762 LinkDB All DBs Position 4:3780169..3829421 Genome browser AA seq 1111 aa AA seqDB search MVGDSRKSKAKEKRRSNEKRKEKSRDAARSRRSRETDIFTELARALPISPEQPAHLDKAS VMRLAIAYLKVRSVIDALEEPVVKCPSLTEMDADFPQALDGFMLVLSSNGDMVYLSDNVS DYLGVTQMEMMGQSVYEYSHPCDHDELRECLSIKPNDVKEKRPCNFFLRLKCTLTSKGRK VNLKSASYKVIHCTGRAMGICEPNFVKTDSEGSTSRDEDSSEYSSKEEEDTEIVRSNGSG CTGASLVIVGSPIPHPSNIEIPLGRQTFLSKHSLNMKFTYADERLAEYLGWASNELLGKS VFEFHHALDNSALDKSFKSLFSKGQCETMAYRFLSKNGGYAWVVTQATLIHCSKQQKPIS IVCVNHILSGVECEDEVYSERQLEARKAGVTVNSPAASTIDEYEIEDKFNLQSLPALTID TPSATDDSFDATNDFVDESDRENQEDKNEAKNATIQNFDREILMKNTKFAIAENSRPLTV TASIFRSQADIASRDSCRNTSASNTTRITKNTDIRRERANWTFQDKPVLEYEGSRNNRPQ TVTRNVFVPVGLIQDQELSQQHEQTPACRPQTTTASIFAPRTEDMNKGFLTFSEDQPGLT MLKDEPEDLTHLAPTPGDVCVPLEDTPFLSDMLDEFILGTDNYCPLLNTEDLPTELPNSD LSDSLTKDSNEMCGSLESSLADSDPFIYRDMPSPCSLSPDLLSPSGIGKSPDQNSLGSFR SPKHNDLVDDMMTIRSGTSSTNPITEDEMLMLSINDVIGDEELALRAPYIPMSDQDEALQ LLISDDTVMWGPTQPPDKKTKWIQEERKAAPKRYEDSNLARLLKNDTTAVDKFSDHNGGL VNPTQIFSPINEKGSSVSRSERPSKRVHTPISQGLTSETKRSRLNDSKLPIEQSLTCDVT NILENSMKTGNGLHYDEQSIDLCGMVDTSEKKNESPYEEQQHPESRLLLQQLIGRDEDSA STIMTKTRDTTKNKVANLLKIVTKDGTTMAAPRNENKEKIGFAGDGGGIEMSAGLSGKQQ QTNSVLMNLLVSGCDNSPGLDRTLPSASKWSSMMIDQPTQNLIARDGNMTDVDLFAEYPI SSNGQLSPFGNYFSGDTPDSLPRRCRYMSDA NT seq 3336 nt NT seq  +upstreamnt  +downstreamnt atggttggagattcgagaaagtccaaggctaaggaaaaaagacggagcaatgagaagaga aaggaaaaatcgagggatgcagcgcggagtcgacgcagcagggagaccgacattttcacg gagcttgcaagagctttgccaatttcaccggagcaaccggctcatctggacaaagcgagt gtcatgagactcgcaatagcttatctcaaagttcgcagcgttattgatgccctggaagaa ccggtcgtcaagtgtccctcattgacggaaatggatgctgattttccacaggcactcgac ggctttatgctcgttttgtcaagcaacggtgacatggtgtatctatccgacaacgtgagc gattatctcggcgttacgcagatggaaatgatgggccagagcgtttacgagtacagtcac ccgtgcgatcacgacgagctgcgcgagtgtttgtcgatcaaaccgaatgacgtcaaagaa aaacgaccgtgtaacttttttcttagactcaagtgcacactcacgagcaaaggcagaaaa gtcaatctgaagagcgcatcttacaaggtgattcattgcactggacgcgcgatgggaatt tgtgagccaaactttgtcaaaaccgatagcgagggctcaacttctcgggacgaagactcg agtgaatattcgtcaaaggaagaggaggatacagaaatcgtcagatcaaacggaagcggc tgtacgggcgcgtctctcgtcattgtgggatccccgatcccacatcccagcaacatcgaa ataccgctcggacgtcaaacatttttgtcgaagcacagcttaaatatgaaattcacgtac gccgatgagagattggccgaatatctcggatgggcaagcaacgaacttctcggaaaatcc gttttcgagtttcatcatgctctggataactctgcgctcgacaaatccttcaaatccctg ttcagcaaaggacagtgtgaaacaatggcgtatcgtttcctgagtaagaacggaggttac gcttgggtcgtgacgcaggccacgctgatccattgttcgaagcaacagaaaccaatctca atcgtctgcgtaaatcacatcctaagcggcgttgagtgcgaggatgaggtatacagcgag cgtcaactcgaggctcgcaaggctggcgtcactgtgaattcaccagcggcctcaacaatc gacgaatacgagatcgaggataagtttaatttgcaatcgctgccagcactgacgatcgat acaccgagcgccaccgacgattctttcgacgcaacgaacgatttcgttgacgaaagcgat cgtgaaaatcaagaagataaaaatgaagccaaaaacgcaacgatacaaaatttcgataga gaaatattgatgaaaaatacgaagtttgccatcgctgaaaattccagaccactcaccgtc actgcctcgatattccgatctcaggctgacattgcctctcgcgattcctgtagaaatacc tccgcctcaaacactacaagaattaccaaaaatacggatattcgtagagaacgtgccaat tggactttccaggacaaaccggtactggagtacgaaggatcgcgcaacaatcgccctcag acagtaaccagaaatgtcttcgtacctgtgggcttgatacaggatcaagagttgtcacag caacacgagcaaacaccggcgtgtagacctcagacaacaactgcaagtatttttgctcct cgtaccgaggacatgaacaaaggcttcttgacattcagcgaggatcaacctggtctcacg atgttgaaggacgaacccgaggatctgacacatttggcaccgacccccggtgacgtttgc gttcccttagaggatacaccattcctctcggacatgcttgacgaattcattctcggtacc gacaattattgtcccctccttaacaccgaggatctaccgacggaattacccaattccgac ttgagcgattcccttacaaaggacagtaacgagatgtgcggatctctcgaatcttcactg gcggactctgatccttttatttatcgggatatgccgagcccttgcagtctgagccccgat ttactttcaccgtctggaattggaaagagcccggatcagaacagcctcggctccttccga agtccaaagcacaatgacctcgtcgatgatatgatgaccattcgctcgggtacgtcatcg accaatccaataactgaggacgagatgctcatgttgagcataaacgacgtcataggagat gaggaactcgcacttcgtgcaccgtacataccaatgtccgatcaggacgaggccctacag ttgctcattagcgatgacactgtcatgtggggacccactcaaccacccgataaaaaaaca aaatggattcaggaggaaagaaaagcagctcctaaacgttacgaggactcgaatttggct cgtctccttaagaatgatactacggccgtagataagttcagcgatcacaatggaggactg gttaatccgacgcagattttcagtccaatcaacgaaaaaggaagcagcgtgagcagatcg gagaggccgtcgaagcgagtgcacacaccaatctcccaaggtctaactagcgagacgaaa cgtagtcgattaaacgactcaaaattaccgatcgaacaatccttgacttgcgacgtaacg aacatcctagaaaactcgatgaaaacgggtaacgggctgcattacgacgagcagagtata gatctttgcggaatggtcgatacgagtgaaaaaaagaatgaaagtccgtacgaagagcag caacatccggaaagtcgtcttttgttgcaacaattgatcggtcgtgacgaggattcagcc tcgacgataatgacgaaaactcgtgacacgacgaaaaataaagtcgcgaatttgttaaaa atcgtgactaaagatgggactacgatggcagctccacggaacgaaaataaagagaaaatt ggtttcgccggtgatggtggagggattgagatgagtgcggggctgagtggaaagcaacaa caaaccaatagcgtgctcatgaatcttcttgtttccggttgcgacaactctccgggcttg gaccgtactttaccatcggccagcaaatggtcatcgatgatgattgaccaaccgacccag aacctcatcgcgagggacggcaacatgacggacgtggacttgtttgccgaatatccgatt tcttcgaatggccagttaagcccatttggcaattattttagcggtgatactccggattca ctaccccgaagatgtcggtatatgtcagacgcgtag

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