Venturia canescens: 122410297
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Entry
122410297 CDS
T09386
Name
(RefSeq) uncharacterized protein LOC122410297 isoform X1
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
vcan
Venturia canescens
Pathway
vcan03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122410297
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vcan01009
]
122410297
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcan03019
]
122410297
03036 Chromosome and associated proteins [BR:
vcan03036
]
122410297
Protein phosphatases and associated proteins [BR:
vcan01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
122410297
Messenger RNA biogenesis [BR:
vcan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
122410297
Chromosome and associated proteins [BR:
vcan03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
122410297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
P2R3B_EF-hand
EF-hand_7
EF-hand_5
EF-hand_6
EF-hand_1
Motif
Other DBs
NCBI-GeneID:
122410297
NCBI-ProteinID:
XP_043274390
LinkDB
All DBs
Position
4:9260157..9324286
Genome browser
AA seq
1250 aa
AA seq
DB search
MPAVREEEDPEEEEKDRRYAKIGQRDSLIETSEDFDRWFKSIQRLSESKLSVGDTLDLKS
RGLGEGGIDCPRDEVDCHAVRYGYAIPVDVLPIPDNPKFAELVVDRGAISSPVNNYRCER
SDYQEHHRVIYRCEDKQEFHCENKAKGEVNNSLEYRGPRETRMAATAKHEQLRGKFPTES
SSGEEDIAAIAKQISDHAEAIYQTWKSRGLAPTEILNCHSNATAADKFGSALTPTTSVTG
GGMSNAKKSLSPSNSAGQNAVEIIAQSPGIDNNNLEKLVNNFVVEDRARLAAAGRRSPAK
NLPSSIQFALQKFERNSTPHTSPVKTPTGSNLTAAIVKPQIQAKASLLTSPTCPYPGKPS
QIAKPLLSPKTPTSSHHNEIFLETIETTYPADLTPSKILVQQKRPVSTVVTSQTTTSAST
VTENSSSGLTTWPLKNKVTEPRRVANSVTSNSIGRANSPCKEDGYGLASRISPTSAYNVN
SYLDEVAREEERLINALKTGAVITDDASSSSDRSTVSNAAAPVVARQKPAIKKEKPKVEP
VKQIIIGPAPVSNNSAVIPNSATPASAILVNSVVTAPQINSTPSPSDPKSEAFSSALSTA
GYTRKRYRVAQQKIDEQKTPAAVNNSEQLVASTRTKFENDLRKDSPDNGKDERDFVTSRW
GPRLNSPRPRLDQVPHPELTTQQKQHIRAAAATGTGNNPVRPFLTRGSVAERVLIFEKCP
SELLLDKRGPRQPPVNTWRTGHEVQNKAQTYSRDKSQQKGLPPHTTLQRHVKANRNVHIP
RFYFPGGKPPPLSQVEATIANITAAFQSLPGHRASRAQFFIIPKACDLPFYWKVPLFLAA
GGEKNGFVEMSAFLDYWKELTSTCHDAASKFVRIITRGLRNTIIPEDLIPLVQDVVETHP
GLIFLKEATEFHSRYVHTVIARIFYCVNRSWSGKISVAELRRSNLLAVISILQHEEDINQ
VTAYFSYEHFYVIYCKFWELDRDHDLFIDKMDLMRHNDHALSTRLIERIFILTRGGVKSG
GTKQPEDKMSYTEFVWFLLSEEDKNHPTAIEYWFRCMDLDGDGYLSMYELEYFYEEQLQR
MEAIKMETLPFEDCLCQMLDMIHPATPGKISLSDLKKCKMTSIFFDTFFNLEKYLDHEQR
DPFASTRDHDADGEEFSDWDRFAADEYELLVAEENANDQNEQTSYENETEEDAFSPNLDV
LIGSENSNDSNRGKNHGSMNYAENNGTLKDSSKTQNYDSGESDDYAESDN
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atgccagcggttcgcgaggaagaagacccagaggaagaagagaaagatcgtcggtacgcg
aagatcggtcaacgagattcgttgatagaaacgagcgaggattttgatcgttggttcaaa
tcgatccaacgtttgtcagaatcgaagctgtcggtgggcgacacgctggatttaaagtcg
agagggttgggcgagggtggaatcgattgtccgagggacgaggtcgattgccacgcggtt
cgttacggctacgcgatccccgtggacgtgttgccgataccggataatccgaagttcgct
gaattggtggtcgaccgcggggcgatatcttcaccggtgaacaattatcgatgcgaaagg
agcgattatcaagagcatcatcgagtgatttatcggtgcgaggataagcaagagtttcat
tgcgagaacaaagcgaagggtgaagtgaacaattcgctcgaatatcgcgggcctcgagag
acgagaatggcggcaactgccaagcacgagcagctaaggggcaaatttccaacggagtcc
tcgtccggggaagaggacatcgcggcgatcgcgaagcagataagcgatcacgccgaggcg
atttaccagacttggaagagccgagggctcgcgcccaccgaaattctcaattgtcacagt
aacgcgaccgccgcggataagttcggcagcgcgctgacaccgacgacgagtgtcaccggt
ggcgggatgagcaacgccaagaagagtttgtccccgagcaacagcgcgggtcagaacgcg
gtcgaaataatcgcccaaagccccgggatcgacaacaacaatctggaaaagctcgtgaat
aatttcgtggtcgaagaccgcgccaggctggctgccgctggcagacgatcgccggccaaa
aatcttccctcctccatccaattcgccctgcagaaattcgaacggaattccacaccgcac
acttccccggtgaaaaccccgaccggctcgaacctcaccgctgcgatcgtcaagccccag
atccaggcgaaagcgtcactgctcacctcgccaacttgcccctaccctggcaagccctcg
caaatagcgaagcctcttttgtcccccaaaacccccacgagctcccaccacaacgagatt
tttctcgagaccatagaaactacttacccggccgatttgacgccctcgaaaattctcgtc
caacaaaagaggcccgtcagcaccgtcgttacgtcgcaaacgacgacgagcgcatcgacc
gtcaccgagaactcgagctccggcctgacgacgtggccgctcaagaacaaagtcaccgag
ccccggagggtcgccaattccgtcacttcgaactcgatcggcagagcaaactcgccctgc
aaagaagacggctacggcctcgcctcgaggatcagcccaacttctgcctacaacgtcaat
tcttatctcgacgaagttgccagggaagaagagcggctgatcaacgcccttaaaaccggc
gccgtcatcaccgacgacgcgtcctcctcgagcgatcgaagcacagtctcgaacgctgct
gctcctgtcgtggctcgacaaaaacctgccataaagaaagagaagcccaaggtcgagccc
gtcaagcaaataatcatcgggcctgcgcccgtttccaacaattctgccgtcatccccaac
tcggcgacccccgcctccgccattctcgtcaacagcgtcgtcaccgcgccccaaattaac
agcaccccgagcccctcggacccgaagagcgaagccttttcctccgccctctccaccgcc
ggctacaccaggaaacgctacagagtcgctcagcaaaaaatcgacgagcaaaaaactccc
gccgcggtcaacaacagcgaacaattggtcgcctccactagaaccaaattcgaaaatgat
cttcgcaaagactcgcccgacaacggcaaagacgaacgcgacttcgtcacctccagatgg
ggacccagactcaactcccccagacccagactcgatcaagttccccatcccgaactcacc
actcaacagaaacaacacatacgcgccgccgccgccaccggcaccggcaataaccccgtc
agacccttcctcaccagaggctccgtcgccgaaagagttctcatctttgaaaaatgcccc
agtgaacttttactcgataaacgtgggcccagacaaccccccgtcaacacgtggagaacg
ggacacgaggtccagaacaaagcccagacttattcgcgcgacaagtcacagcaaaagggc
ttaccgcctcacacgaccttgcagagacacgtcaaggcgaatcgaaacgttcacataccg
agattctattttcctggtggcaaacctccgcccttgtcacaagtcgaagcaaccatcgcg
aacatcactgctgccttccaaagcttaccgggccaccgagcttctcgagctcaatttttc
atcatcccgaaggcttgtgatttaccattctactggaaagtacccctcttcctcgcggcc
ggtggcgagaaaaatggtttcgtcgagatgtcagctttcttggactactggaaagaactg
acgagcacgtgtcacgacgctgccagcaaatttgtcaggatcataactcgaggactcagg
aatacgattatcccagaagacttgattcctctggtccaggacgtcgtcgagactcatccg
ggtctcattttcctcaaagaagcgacggaattccactcgcgatacgtccatacggtaatc
gccaggatattttattgcgttaatcgaagctggagcggaaagatctccgtggcagaatta
cgtaggagcaacttactcgctgtaatcagtatcctccagcacgaagaggacatcaatcaa
gtcacggcgtacttcagttacgaacacttttacgtcatatactgcaaattttgggaattg
gatcgtgatcacgatttgtttatcgataaaatggatctgatgaggcacaacgatcacgcg
ttgtcgacccgcttgattgagagaatattcatcttgacacgaggcggagtgaaaagtggt
ggcactaaacagccagaagacaaaatgagttatacggaattcgtgtggtttttactcagc
gaagaagacaaaaatcaccccactgccatcgagtattggttcagatgcatggacttggac
ggtgatggctacctgtcgatgtacgagctcgaatatttctacgaagaacaattgcagcgt
atggaagcaattaaaatggagacactgccgttcgaggattgtttatgtcaaatgctggac
atgattcatccagctacaccaggaaaaatatccctgagcgatttgaaaaagtgcaaaatg
acttcaatattctttgacactttcttcaacctcgagaagtatcttgatcacgagcagaga
gatcctttcgcatcgacgagggatcacgacgccgatggtgaagagttctccgattgggac
cgattcgctgcagacgaatatgaattgttggttgccgaagaaaacgcgaatgaccagaac
gagcagacatcgtacgaaaacgagacggaggaggatgccttttcgccgaacctcgatgtg
ctcataggtagtgaaaattcaaacgattcaaaccgagggaagaatcacggatcgatgaat
tacgccgaaaacaacggaacgttgaaagattcatcgaagacccagaattatgacagcgga
gagagcgatgattatgctgaaagtgacaattaa
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