Venturia canescens: 122410408
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Entry
122410408 CDS
T09386
Name
(RefSeq) exodeoxyribonuclease isoform X1
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
vcan
Venturia canescens
Pathway
vcan03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
122410408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcan03400
]
122410408
Enzymes [BR:
vcan01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
122410408
DNA repair and recombination proteins [BR:
vcan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
122410408
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
122410408
NCBI-ProteinID:
XP_043274443
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Position
5:complement(6732982..6735377)
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AA seq
381 aa
AA seq
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MLRQFLGKNFEYFFKNINIPLFIVTKVFQSYNTSIYSSLLKPAYLSIMPPKRSRPAKAVL
TKAPKESSECPTPTSAKKTKRADENDEEPTSKKPKLDTPKTMMNKVDSDLSTMDFGCEKL
NANGDKYNLKISTWNVSGIRAVIKKNGMDYIIKEDADIVALQETKCESNKLPNEVKLPGY
ERYFLESKKAGYCGVALYSKVKPIEVKYGLPNSGCNDEGRCIMAEFEKFYLVNVYVPNAG
NKLVTMPKKLKWNEAFKAFILKLDKEKPVIICGDLNVAHQEIDLKNPKTNTKNAGFTPEE
REGMTDLLAAGFVDTFRDLYPEKTGAYTFWSYFANARAKNIGWRLDYYLVSERIKKNVCD
QIIRDQVYGSDHCPVVLYINL
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgttacgacaatttttggggaaaaatttcgagtattttttcaaaaatattaacattcca
ttatttatagttacaaaagtttttcaatcatataacacaagtatttattcgtcgttatta
aagcctgcgtatctgagtattatgccgccaaaacgaagtcgtccagcgaaggccgttctg
accaaagctccgaaagaatcgtcagaatgcccgactccaacatcagcgaaaaagacaaaa
agggccgacgaaaacgacgaagaacctacttcgaaaaaacctaaacttgatactccaaaa
acaatgatgaacaaagttgattcggacttgagcaccatggattttggttgcgaaaaattg
aacgccaatggtgacaagtacaatttaaaaataagtacttggaacgtttctggaattaga
gctgtcataaaaaaaaatggtatggattatattataaaagaagatgcagatattgttgca
ttgcaagaaacaaaatgtgaaagcaacaaactccccaacgaagtaaaattaccaggatac
gagcgttacttcttggaaagcaaaaaagcaggttattgcggagtggctttgtattcaaag
gtgaaaccaattgaagtgaaatatgggctcccgaactcgggatgcaatgacgaaggtaga
tgcataatggcagagtttgagaaattctacttggtcaatgtttatgtaccaaatgctgga
aacaaattggttacaatgcccaaaaaactaaaatggaatgaagcattcaaagcgttcatt
ttaaaattggacaaagaaaaaccagttattatttgtggtgatttaaacgtagctcatcaa
gagatagatctgaaaaatccaaaaaccaacacgaagaacgctggtttcacaccagaagag
cgagaaggaatgacagatcttctagcagcaggttttgtcgacactttcagagacttgtat
ccagaaaaaactggagcttacacgttctggtcatactttgcaaatgcaagagcaaagaat
attggatggcgactcgactactacttggtgtctgaaagaatcaagaaaaacgtttgtgac
caaatcataagagatcaagtttatggtagcgatcactgtcccgtggttttgtacataaat
ttgtaa
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