Venturia canescens: 122410447
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Entry
122410447 CDS
T09386
Name
(RefSeq) chromatin assembly factor 1 p55 subunit
KO
K10752
histone-binding protein RBBP4
Organism
vcan
Venturia canescens
Pathway
vcan03082
ATP-dependent chromatin remodeling
vcan03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122410447
03083 Polycomb repressive complex
122410447
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vcan03036
]
122410447
Chromosome and associated proteins [BR:
vcan03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
122410447
Histone modification proteins
HAT complexes
HATB complex
122410447
HDAC complexes
Sin3A-HDAC complex
122410447
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
122410447
PRC2.2
122410447
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
122410447
Heterochromatin formation proteins
Other heterochromatin formation proteins
122410447
Chromatin remodeling factors
NuRD complex
122410447
NuRF complex
122410447
NuRF complex (fruit fly)
122410447
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
CAF1C_H4-bd
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
EIF3I
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
WD40_RFWD3
Beta-prop_WDR19_1st
ANAPC4_WD40
eIF2A
Beta-prop_RIG_1st
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
NBCH_WD40
Beta-prop_IFT140_1st
MIOS_WD40
Beta-prop_DCAF4
YqbF
Motif
Other DBs
NCBI-GeneID:
122410447
NCBI-ProteinID:
XP_043274520
LinkDB
All DBs
Position
5:complement(8474705..8478642)
Genome browser
AA seq
427 aa
AA seq
DB search
MGDKDGETFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGK
DYSVHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASHYDNEKGEFGGFGSVSGKIEIEI
KINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKE
GYGLSWNPNLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDVAWHLLH
ESLFGSVADDQKLMIWDTRCNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVA
LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSPEDA
EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPDTPAS
ELEAGAS
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacaaagacggtgaaaccttcgacgacgcggttgaggagcgtgtcatcaacgag
gagtataaaatatggaaaaagaatactccttttttgtacgaccttgtgatgacccatgct
ctggaatggccatcgctgacggcacaatggctacctgacgttacaaggcccgagggcaag
gattattccgttcatcgtttgatactgggtacccacacatccgacgaacagaatcacctt
ctcatcgcgagcgttcaattgccaaatgaggatgcccaattcgacgcctcgcattatgac
aacgaaaaaggcgaatttggaggctttggttccgtcagcggaaaaattgaaattgagatt
aagattaatcatgagggagaagtgaacagagctagatatatgccgcaaaatccttgcgtc
attgctaccaaaactccttctagcgacgtacttgtttttgattatactaaacatcctagt
aaacctgatccaaacggagaatgccatcctgatttaaggttacgcggccatcaaaaggaa
ggctatggtctttcgtggaatccaaatctcaatggttacttgttaagcgcttccgacgat
cacacgatctgtctctgggacataaacgcaacacccaaagaaaatcgtgtgatcgacgcg
aagacaatttttactggccacaccgcagtcgtcgaggatgtagcctggcaccttctgcat
gaatctctgtttggttctgtagctgacgatcaaaaattgatgatctgggacactaggtgt
aacaacacgagcaaacccagccacaccgtcgacgcccacacagctgaagtcaattgtttg
agcttcaatccttattccgaattcattctcgcgaccggaagcgccgacaaaacagtcgcc
ttgtgggatctccgcaatttgaagctcaagctgcactctttcgagtcgcacaaggatgag
attttccaggtacaatggtcgccccataacgaaacgatactcgcaagcagtggcaccgac
agacgtctgcacgtttgggatttgagcaaaattggcgaggaacaatcacccgaggacgct
gaagacggaccacctgaattactgtttatccacggaggacacacagcaaagataagtgat
ttttcgtggaatccgaacgagccctgggtcatatgttcggtgtcagaggacaatattatg
caagtatggcaaatggctgagaacatatacaacgacgaggagccggacacaccagcgagt
gaactcgaagctggagcatcataa
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