Venturia canescens: 122410449
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Entry
122410449 CDS
T09386
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
vcan
Venturia canescens
Pathway
vcan04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
122410449
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vcan04131
]
122410449
Membrane trafficking [BR:
vcan04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
122410449
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
WD40_CDC20-Fz
ANAPC4_WD40
zf_RING_Vps8
Beta-prop_WDR5
TPR_Vps41
WDR55
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_EML_2
PQQ_2
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
zf-RING_2
TPR_VPS8_2
Rtf2
zf-RING_Vps41
zf-RING_11
zf-RING_5
Beta-prop_LRRK2
Beta-prop_EML
zf_RING_Vps8_fungal
WD40
Prok-RING_1
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
122410449
NCBI-ProteinID:
XP_043274526
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Position
1:complement(2700550..2708962)
Genome browser
AA seq
1314 aa
AA seq
DB search
MAENGFGSDVGSQENLAAEAINLDIEELDDAEYAIPAVNQLPSLESILKEPDCGSLSGTD
DDCLGAVSVDKLGSSETASVGSLLSLNSLNRGLRPPQLPPTGAILRHVILKGISAQIVSA
SERVNAGLASAVAAGGNMLVIGTSHGLVLGFDSTQTLRWCDQEARHQGSVSALCFNHDGS
RLLAGFARGHILMIDSSNGKVLRTLTEVHPPGTAVLHVKFTDSPTLALCSDSGGSVFELS
FTRVMGVRGCDSKCLFSGSRGEVCTLEPLLLNHLPSHPLKNYTLVALATLSKVIVVCIRP
RMRVVLTHPLSGTSIAPPQVSWQLVVIQAADASRVIDPVLALARDMTVHFYQVCSEAGSR
VRLLPLRRVVLSYTISNLRWLNARSLAILDTQERLHLLDVRTQDNLETLDMSRVGISYAS
SHFKGLSTGGNVSKAMALAGERACYNTVITFGTQLLLLGTKSLHAVCIRTWTERLRHLTM
QRRFPEALALGLSFYQDKGKAVVGLRGSKQRRKQIARDKVCQVLIQYMEELNQCSIEDTT
DCDIVTTCVDYCVQLENTELLFGRLWDLVSESESLKAAYLRALEPPLLDGSLVPRLPPLI
AQHLVALYDHEERMESLQAIAVLLEVDCLDIHQVTTICRQRCLWEALIHLQTSALCDFTA
PIHQLVPLLQTFITNSTWKETLPRDCIRLGNALLVYASCCLAGRAFPRGELPDGLPQRAK
AEVLRALLSQHSSLASDSERQYPYLRTLLRFDARGFLDVIAIAFQEIEFKTEMGLRQRQR
LVDILLGIVVPTTPLSPDNPDYLTDDQKATVLVFVANEVAEGNVSLEPSVLNRLVEVLTS
DSANFTTGTSNVTRDRKIERENALLKLLHFKKLAGITDNTLLNLAQRANFLRVAELLYSA
RDDWTAVCRCLIADTYRHHEIWPWLESLPSSSFQHVVLAQASPLVKIDAAKLASLIATKA
STKFTKILERLSNESTCLEYSLLSALYNITNYREDEEEDKKLELSTEQLENFLSLMCQHE
PDKVVSHMNSHHGCRLDEALRIVREMGHREAEAVMLEKLGNYQEAFDLLLSELHEHLRIY
HCEDATDGDAVRSTIQLSGLCRRSAGNLDWMPLVEAVLQPQSDDNDQKVERLRGKLLKIV
LETLSGTTALSTVLEQILKHPLATSGTIGDIRQLLTGVLTHSRYEQVLVETTANLVSLEL
HETLKKSLRDAGRAYASKSQICPVCRQTLIQCADYTILFGCGHVFHAGCLGESKMCVKCR
SDKGWAPPATNVSEVPRPRPPERRPILPPAFMRRRDLTLRVGAPTVLPDLEGIF
NT seq
3945 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaaatgggtttggatcggacgtcggttcccaggaaaatctcgctgccgaggct
attaatttggatatcgaggagcttgatgatgctgaatatgcaatacctgcagtcaaccaa
ttaccatcgctggaaagcatcctcaaagaaccagactgtggttccctttcagggacggat
gatgactgccttggtgctgtttccgttgataaattgggtagcagcgagacggcgagtgtc
ggcagtcttttgtcgcttaattccttaaacagaggtctcaggccacctcaacttccgcca
acaggagctattcttaggcatgttatcctcaaaggaatatctgcccagattgtttccgca
agtgaacgagttaatgcaggattggcaagcgcagttgccgcaggtggaaatatgctagta
attggaacaagccatggtctcgtgcttggttttgattccacacaaactcttcgatggtgc
gatcaagaagcccgtcatcagggctctgtgtcagctctatgtttcaatcacgacggcagc
agacttcttgccggctttgctcgaggacatatcctcatgattgacagttcgaacggcaaa
gttttaagaaccctaacagaagttcatccacccgggactgctgttctccatgttaaattt
acagattccccgacactggcactttgcagtgacagcggaggttcggtattcgagctcagt
tttacacgtgtcatgggtgtccgtggctgtgacagcaagtgtttgttcagtggttctcga
ggcgaagtttgcaccctcgagccgcttcttttgaatcatcttccgtcgcatccgttgaaa
aattacactctagttgcactcgcaactctatccaaagttattgtagtttgcattagaccg
agaatgagagttgttctgacacatcctttgtccggaacttcaatcgcgccacctcaagtg
tcgtggcaattagtcgttattcaagcggccgatgcatcgagggtcatcgaccctgtgctc
gcattagcgagggacatgactgtccacttctatcaggtttgttccgaggctggttcgcgg
gtcaggcttttacctcttcgaagagttgttttgtcgtacacgataagcaatctgaggtgg
ttaaatgcccgatccctcgccatcctcgacacgcaggaacgtctgcatcttttggatgta
cgaacacaggataatctcgaaacattggacatgagtcgagtgggaatatcgtacgcttcg
agtcatttcaaaggtttatccaccggaggcaatgtttccaaggcaatggctctagccggt
gaacgggcttgttacaataccgtcatcactttcggaacgcaattattgttactcggtaca
aaaagtttacatgctgtttgcattaggacgtggaccgaaagattgagacatttaactatg
cagcggcgtttccccgaagctttagctctaggtttatcattctatcaagacaaaggtaaa
gctgttgtgggtttgcgaggttctaagcaacgaagaaaacagatcgcgcgtgacaaggtt
tgtcaggttttgattcaatacatggaagaattgaatcagtgttcgatcgaagacaccacg
gattgcgatatagttacaacctgcgtcgactactgcgttcaattggaaaacaccgaatta
cttttcggcagactttgggaccttgtgtccgaatcagagagccttaaagctgcttatctt
agagcactcgaacctcccctcttggatggcagtcttgtacctcgattaccacctctgatc
gcgcaacacttagtggcactatatgatcatgaagaaagaatggaatctcttcaagctatt
gctgttcttctcgaagtcgattgtctcgatatccatcaggttacaacgatttgcagacaa
cgctgtttatgggaagccttgattcacctccagacctctgcgttatgtgactttactgct
ccgatccatcaactggtgccccttcttcaaacatttatcacaaattcaacgtggaaagag
actttgcctagagattgtataagactcgggaacgctctcctcgtttatgccagctgctgt
ttagctggccgagcttttccacgcggtgaattacccgacggtcttccacaacgagccaag
gccgaagtactcagagccctgctctcgcaacattccagtctcgcgagtgattccgagcga
caatatccatatcttcgaacccttttgcgtttcgatgcgcgtggttttctcgatgtaatt
gcgatagctttccaagaaattgaattcaagacggaaatgggtttacgacagcgacaaaga
ctcgttgacatattgttgggaatcgttgtcccaacgactcctcttagccctgataatcca
gactatttgaccgacgaccaaaaagccacggttctcgtattcgttgccaacgaagtcgcc
gaaggaaatgtcagtctggaaccgagcgttttgaatcgactcgtcgaagttcttaccagc
gacagtgctaactttaccaccggcacttccaacgtcaccagggatcggaaaatcgaacgc
gaaaatgctcttcttaaacttttacattttaaaaaactcgctggcattactgacaacact
cttttgaatcttgctcagagagccaattttttacgagtcgctgagttactctacagtgca
cgtgacgattggacagcagtgtgccgttgtctgatcgccgatacgtaccgacatcacgag
atttggccgtggttagaaagtctgccatcttcgtcgttccaacacgtagttttagcccaa
gcctcaccactcgtgaagatcgatgcagcgaaactcgcgtctctaattgccacaaaagct
tccaccaaattcactaaaatccttgaaagactgagtaatgaaagtacgtgcttggaatat
tcgctcctttcggcgttgtacaatatcacgaattaccgggaggacgaagaggaggataag
aaactcgaattgagcactgaacaattggaaaactttttgtctctcatgtgccaacatgaa
cccgacaaagtcgtgagtcatatgaattctcatcacggctgccgactcgacgaggcactg
agaatcgttcgcgaaatgggtcatcgcgaagctgaggctgtgatgctcgagaaactcggc
aattaccaggaagcttttgatcttctgctttcggaactccacgaacatcttcgcatttac
cactgcgaagacgcaactgatggtgacgcagtgagatcaaccatccaattgtcaggtttg
tgccgtagatccgctgggaatcttgattggatgcctcttgttgaagcggttttacaacca
caatctgacgacaatgatcaaaaagtcgaaagattacgaggaaaactgctgaaaatcgtt
ctggaaacgttgagcggtacaactgctctctccaccgttctggagcagatattgaaacat
ccattggcaacgagtggcacgataggcgacataaggcaattattaaccggagtattgacc
cactcgcgatacgaacaggtgctcgtcgaaacaacagcgaatttagtgagcttggagctt
catgagactctgaaaaaatccttacgcgacgcaggtcgtgcgtacgctagtaaatcacaa
atttgtccagtttgtcgacaaaccttgattcagtgcgcagattacacgatactttttggt
tgcggtcacgtttttcatgccggttgcctcggcgaatcaaaaatgtgtgtaaaatgccga
agcgataaaggatgggcgcctccggcgacaaatgtttcagaagttccacgaccccgacct
cccgaacgacgaccaattctaccgcccgcttttatgcgtcgtagagatctgactttgagg
gtcggagctccgacggttttaccagatctcgaaggtattttttaa
DBGET
integrated database retrieval system
