Venturia canescens: 122410526
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Entry
122410526 CDS
T09386
Name
(RefSeq) ABC transporter A family member 1-like isoform X1
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
vcan
Venturia canescens
Pathway
vcan02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122410526
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcan02000
]
122410526
Transporters [BR:
vcan02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
122410526
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
AAA_23
RsgA_GTPase
AAA_29
AAA_30
MMR_HSR1
DLIC
Motif
Other DBs
NCBI-GeneID:
122410526
NCBI-ProteinID:
XP_043274649
LinkDB
All DBs
Position
5:7448429..7480960
Genome browser
AA seq
1738 aa
AA seq
DB search
MDFIELGETEKKSRRGAKMGSCGVYFSQLRAMLVRNLLLKKREKRKTIAEVFLPLYTLGI
LIVVKVLIPNPNYPPMGTQRQDGDIFEFFNGYKNNTVAVVPNSTETITFLNAMNNLWLSM
WDYPEKLPLNFMVLDTKDDLQAAYWRDPYSVPLAVIFENPQPITQRLLYEIRTNPSYTSP
PPPTELFSSPVTCRKDTSHWMGGVLSIETGGSCPVNNYFYSGFLALQMIIDITKIRLDTG
NADITVPDVKLEMFPKKAYTADWMVAFRVVFPLYMVMALSQFITYLLILIVGEKENKIKE
GMKIMGLKDSVFWLSWFIIYAIFVFLLSAVAVILLFTLQMFQHTHFLPIFLLVVLYSFSV
IMFAFMITPFFDKSRTAGVLGNFAVTILSLMYFIHVFVDDSSSISFWVVSLLSPTGVALA
MDKALVADLQGEGVNFDNLWSGPGMPFGGSLIMMTLDIFLYALMAYYLDSVVPSEYGIKR
PAWFCFTPGFWCKKKVQRQQIPSSNGESNSFIPEEEANRDVEPVVREMKGREAIRIVDLY
KTYHKCRKPEIKAVNGINLTIYEGQITAILGHNGAGKTTLFNILTGLTSPTAGTALIFGY
DVRDSNDMQMIRSMTGVCPQHDILFDLLTPREHLEFFAAVRGIPRSMIDMEVKKTLKDID
LTEKANTFAKYLSGGQKRKLSVGIAIIGDPKIIILDEPTAGVDPYSRRQMWSFLQSRRHG
KVILLTTHFMDEADILADRKAVISKGKLRCCGSSLFLKNKFGIGYHLTLVLEGNGRIHAI
TRLVTSHVAKAEKARRHGRELSFILPHNSVESFAPLFSAIEHEIKTRTSRLGISSYGVSM
TTLEEVFLHLEKDDETECTMDNLSKKMVRNRALSRSLSLQSKSTSYQSLQNEGATVQPDG
QVKGTGDLPDCLHNDKTPTILGLGLDPIKIRPNFFQTLYAMLRLRVLRLCRNLQLLYFTI
VAPLALVVLGLYMNSIQTVDIKMQSLELNNDTYGTETRILYTNSSDRDISPLVNHISKSV
ETLVEYDGNTSALLHMSPHMAAFNIDDYKRHRINLTLIYNDTMQHSLPIFMNILSNAYHR
LLLGTSTQYPIEVKTHPFQQTSQPQEFNIGIASSSLFIGMDFVLVPITLAVDMVYDREIK
TKNQLRVNGLSFQMYFLTYFIVLVGLMSFISLCILGIIFLFDVPSLQEVPALLTLGGLLM
LYCPSSILFSTCLSYIFDKMDSAQSILPNIATFFGLIPFILVMILDMLGLGGTLQGGTAA
FALHVVFSLLNTMYVPYAAVYYVDRVHLMCSINAACHHLTMSDYLTSEIIVMALSVLIHC
PLWFFVLLILDIKKSGGNVSDVFKYFLRNGGSIGEEIMENSDVGEHEDTDVKNERQRVFN
FITSSSVQEPPVVLVQNLRKEYRQSEIVSCGCCTKREEEPKPVRKLAVRNLSLAVEPGEV
FGLLGHNGAGKTTTMKIIIAEEAATRGRVQIGGHNINSHMTEAFRQMGYCPQHDAQWKNI
TVREHLECYAAIRGVPWGDIDRIVDLYLSGLQIHEHADKQSQECSGGTRRKLSFAMAMVG
GPKVVLMDEPSTGMDPRSKRFLWDTILASFQGGRGAILTTHSMEEADALCSRVGIMVKGE
LRCLGSTQHLKNLYGAGYTLEMKLLGGDCTPTTPSGDRISSLKDFVGGMFPDATLEESFA
DRLVFAVPQHSVTSLADCFTQLEKAKLELDIEEYSFSQTTLEQVFLKFSHYDEVNSGE
NT seq
5217 nt
NT seq
+upstream
nt +downstream
nt
atggattttatcgaattgggggaaactgagaagaaatcacggcgaggagccaaaatggga
tcctgcggagtgtactttagccaactacgggcgatgctcgtaaggaatttacttctcaaa
aaacgcgagaagcggaagaccatagcggaagtctttctacccctctacaccctggggata
ctcatagtagtaaaagtcctcataccgaatccgaattatccaccgatgggaacgcagaga
caggacggtgacatattcgaattttttaatggatacaaaaacaacacagtggcggtcgtg
ccgaactcgacggagacgatcactttcctcaacgccatgaacaatctttggctctcgatg
tgggactaccccgagaaattgcccttaaatttcatggtgctcgatacaaaggacgatctc
caggccgcctactggcgggatccttacagcgtaccattagcagttattttcgagaaccct
cagccaataacgcaaaggcttctgtacgaaatacgaacgaacccgtcgtacacgtcgcca
cctccaccgacggaattattctcgtcgcctgtgacgtgtcgcaaggacacgagccactgg
atggggggtgttttatcaatcgagactggaggatcgtgccctgtcaataattatttctac
tcgggtttcctggcgctccagatgataatagacatcacaaaaattcggctcgacacaggg
aacgctgatatcacggttccggatgtaaaactagaaatgtttccgaagaaagcttacacc
gcagattggatggtggcgttcagggtagtgttccccttgtacatggtcatggcgttgtcc
caattcatcacttatcttctgattttaatcgtcggagagaaggagaacaagataaaggaa
ggaatgaagataatgggcctgaaggattcagttttttggttgtcctggttcatcatctac
gcgatcttcgtatttctgctctcggctgtagcagttattttgctcttcaccctccagatg
ttccagcatactcattttttgccaatcttcttgctcgtggtgctctacagcttttctgta
ataatgttcgccttcatgatcacgccgttcttcgacaagtctcggactgccggggttctc
ggaaattttgcagtcacgatactcagcctcatgtacttcattcacgtcttcgtcgacgat
tcgagctccatttccttctgggtcgtctcgctcttgagcccgactggagtcgccctcgct
atggacaaggctctggtcgcggatctgcaaggcgaaggcgtcaactttgacaatctttgg
tccggtccaggaatgcctttcggtgggagcctcatcatgatgactcttgatatatttctg
tacgctttaatggcttattatctcgactcggtcgtaccgagtgagtacggaatcaaaagg
ccagcgtggttctgcttcacccctggattttggtgcaagaagaaagtccagcgacaacaa
ataccttcgtcgaacggagaatcgaattcgtttataccggaagaggaagcgaaccgcgac
gtggagccggtagtacgagaaatgaaaggtcgcgaagcgatcagaatagtggatttgtac
aagacatatcacaagtgtcgtaagcctgaaataaaagctgtgaatgggattaatctgacg
atatacgagggccaaataacggcgatcctggggcacaacggagccggtaaaacgacgctc
ttcaatatcctcaccggcttgacctcgcccactgcaggaactgcgttgatatttggctac
gacgttagggactcgaacgacatgcagatgataaggagcatgacgggcgtttgtccgcag
cacgatattctttttgaccttttaacgccccgcgaacacttggaattctttgcggctgtc
agaggaatcccgaggtcgatgattgacatggaagtgaaaaagactctgaaagacatcgat
ttgaccgagaaagcgaatactttcgcaaagtatttgagcggtggacaaaagcggaagttg
tcggtcggcatagcgattatcggggatccgaaaatcataatcctcgacgagccaacagcc
ggcgtcgatccttactcgaggaggcaaatgtggtcgttcctgcagtcgaggagacacggc
aaagtgatcttgttgacgacccacttcatggacgaggctgatatcctggcggacagaaaa
gctgtgattagcaaagggaaacttcgatgttgcggaagctcgttgttccttaaaaataaa
tttggaattggttatcacttaacgctcgtactcgaaggaaacggacgaatccacgcgata
actcgcctcgtaacgtcccacgtcgccaaagccgagaaagctcgccgccacggtcgcgaa
ttgagcttcatacttcctcacaactcggtggagagttttgctcctctcttctcggcgatt
gagcacgaaataaagacgagaacgagcagactcggcatcagcagttacggagtctcgatg
accactctggaggaagttttcttgcatctggagaaggacgacgaaaccgagtgcacgatg
gataatctctcgaaaaaaatggtacgaaatcgtgcactcagtagatcactgtcgcttcaa
tccaagagcacttcttaccagagcctccagaacgagggtgcgactgttcaacctgacgga
caggtcaaaggaaccggtgatttgcctgactgccttcacaacgacaagactccgacgatt
ctcgggctcggtttggacccgatcaagataaggcctaactttttccagactctttacgcc
atgctcagactccgcgtgctcaggctatgcagaaatcttcaattgttgtatttcacgatt
gttgcacccctcgctctcgtcgttctcggtctctacatgaacagcatacagaccgttgat
ataaagatgcaatcgttggagctgaacaacgacacttacggtacggaaacgagaattctg
tacacgaacagctccgaccgtgacatatcgcctctggtgaatcacatcagcaaaagcgtc
gaaactctggtcgaatacgacggcaatacgtcggctctgctccacatgagtccgcacatg
gcagcgtttaacatcgacgactacaaaagacacaggataaatctaactctcatttacaat
gacacgatgcagcactcgctacccattttcatgaatattctttcgaacgcgtatcacagg
cttcttttgggaacgagtactcaatacccgatcgaggtgaaaacccatccgttccagcag
acttcacagccccaggaattcaacatcggcatagcgagttcgtcactttttattgggatg
gatttcgtcctcgtaccgattacgttggcagtcgacatggtttacgatcgtgagataaaa
acgaaaaatcagcttcgcgtcaatggtctctcattccaaatgtattttctgacatacttc
atcgtcctcgttggcctgatgtcgtttatatctttgtgcatcctcggtataatatttctc
ttcgatgtgccctccctccaagaagttccggcactgctgaccctcggtggccttctcatg
ctgtactgcccctcgtcaatactcttttcaacttgcctcagttacatattcgacaaaatg
gactcggctcaaagtatcctcccgaatatagcgacgtttttcggtctcataccgtttatc
ctcgtgatgatactcgacatgctcggactcggtggtactcttcaagggggcacggcggca
tttgctctccacgtagttttctcactgctcaataccatgtacgtaccctacgctgctgtc
tattacgtcgaccgtgttcatctcatgtgctcgatcaacgccgcctgccaccacctcacc
atgtccgactatttgacctccgagatcatcgtcatggctctcagtgttctcatacactgc
ccactctggttcttcgttctcctcatactcgacatcaaaaagagtgggggcaacgtcagt
gacgttttcaaatacttcctccgtaacggaggttcgataggcgaagaaataatggagaat
tctgacgtgggggagcacgaggacacggacgtgaagaacgagcgtcagcgcgtcttcaat
ttcataacttcgtcctcggtgcaagagccgccggtcgtgctggtgcagaatttgcgaaaa
gagtatcgtcagagcgagattgtctcgtgcggctgttgtacaaagagggaggaagagccg
aagcccgtgaggaaattggcggtgagaaatttgtcgttggcggtcgaacccggcgaggtg
ttcggactcctcggccacaacggagctggaaaaacaaccacgatgaagatcatcatcgcc
gaagaagccgcgacccgcggccgcgtccaaatcggcggtcacaacatcaattcccacatg
accgaagccttcaggcaaatgggttactgcccccagcacgacgctcagtggaaaaacatc
accgtgagagagcacctcgagtgctacgccgcgatacgcggcgtcccctggggcgacatc
gaccgaatcgtcgacctttatctctccggcctccagattcacgaacacgctgataaacag
agccaggagtgctccggtggcacgaggcgaaagctgagcttcgctatggccatggttggc
ggcccgaaggtcgtcctcatggatgagccgagcacgggcatggaccccaggtctaaaaga
ttcttgtgggacaccatactcgccagtttccagggtggacgaggggcgatcctcacgacc
cattcgatggaggaggctgatgcgctgtgctcaagagtcggcataatggtgaagggcgag
ctgagatgcttaggctcgacccagcacttgaagaatctgtacggagccggctacacgctc
gagatgaaactcctcggtggcgactgtaccccgacgacgccttcgggcgacagaatatcg
agcctgaaggacttcgttggtgggatgtttccggacgccactcttgaggagagcttcgct
gacaggctcgtcttcgccgtgccgcagcactccgtgacatcgctcgcggactgtttcacg
cagttggaaaaggcaaagttggagctggacatcgaggagtacagctttagtcagacaacc
ctcgagcaggtgttcctgaagttttcgcactacgacgaggtgaacagcggcgaatga
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integrated database retrieval system
