Venturia canescens: 122410773
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Entry
122410773 CDS
T09386
Name
(RefSeq) ATP-dependent helicase brm-like isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
vcan
Venturia canescens
Pathway
vcan03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122410773
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vcan03021
]
122410773
03036 Chromosome and associated proteins [BR:
vcan03036
]
122410773
Transcription machinery [BR:
vcan03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
122410773
Chromosome and associated proteins [BR:
vcan03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
122410773
Chromatin remodeling factors
BAF complex
122410773
PBAF complex
122410773
GBAF(ncBAF) complex
122410773
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
Bromodomain
BRK
ResIII
QLQ
HDA2-3
DEAD
NirdL-like_HTH
Motif
Other DBs
NCBI-GeneID:
122410773
NCBI-ProteinID:
XP_043275128
LinkDB
All DBs
Position
5:1294444..1303950
Genome browser
AA seq
1887 aa
AA seq
DB search
MASPSPQPSPMQLPQAQSPMGPPQQSPSHSTSNPQGSPMGPPQHHHHGSNQDYPGGSPMP
PQSQQVPPSQQQQQGYPLHPQQMPPNMGPQSQGGPGGPGPMSQQGNAMMPGQMGPNVPPG
GGHMGPGGPGQGVSGGPGQMGHGGPNPMGPGGPNQMGLGGPGQMGPGGGPGHMGPGVPMQ
MGPGGPGQMGPGGPGQMGPGGPGQMGHGQMGMPGQMHGPNSMGQGPVGHMGSGQGASGHG
PPHMSQGAPGPHMGPGGPQNPQMGPGMPGRIPPGHINASQPGHMGPSSGPMTPSGPGHMG
PGGSPGGPMPPSGPSHMGPSGPNAINSNQMPPGSPNQMGLNGPGQMVPPGNAGQMGSNGH
GQMSPGGPGPMGPNGPQMGQINMGGPASQMGMSGPGGMMSMNSPASQAGANGPRSQMGSG
VPTSMGPENGPGAQMGPGSGPSNQMSEIRGSMPPNESRSPMLQADSRGPIGPINSPGQMN
PGGPGGPMNSGGSTPMGPASSGAPPPSVGPAGPVQMGPNGPVNQIIPPGPGPHGPGGTSP
GASGPGQENLNALQKAIDSMEEKGLQEDPRYAQLLALRARQGNNLGDKQAFSSQQLQQLR
VQIMAYRLLARNQPLSQQLALAVQGGAPPPSPSGMGQRPPVDSAQAPPASTGPPTPVPNA
LGPNGPPRLGAQTPQQHQPQQPVPKTNRVTSVAKPVGLDPLLILQERENRVAARIALRKE
QLSYLPTNMSEDLRIQAQIELRMLRVLNFQRQLRSEIIACTRQDTTLETAVNVKAYKRTK
RQGLREARATEKLEKQQKLEAERKRRQKHQEFLTSVLQHGKDFKEFHRNNVAKLARLNKA
VLNYHANAEREQKKEQERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISN
LTEMVKQHKMEQKRKQVEEQKRKKKKKRPQDSEEGANGDDVRVSVIEIATGKTLTDEDAP
LMSQLSAFLETHPGWEPVESGSEGDTDDDEENEEKDRDSAEKDELAADMAEDKVKKTLQK
AKIEDDEYKTEEQTYYSIAHTIHERVTEQASIMVNGKLKEYQIKGLEWLVSLFNNNLNGI
LADEMGLGKTIQTIALVTYLMELKKVNGPFLIIVPLSTLSNWVLEFEKWAPSVVVVSYKG
SPIVRRAIQAQMRTTKFNVLLTTYEYIVKDKGVLAKLQWKYMIIDEGHRMKNHHCKLTQV
LNTHYLAPHRLLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVEL
NEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGLQKVLYKHMQSKGV
LLTDGSEKGKKGKGGAKALMNTIVQLRKLCNHPFIFQVIEEKYCEHVGTGGTSVVSGPDL
YRASGKFELLDRILPKLKATNHRVLLFCQMTQLMTIMEDYLSWRGFMYLRLDGTTKAEDR
GDLLKKFNDPGSNYFLFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQ
KNEVRVLRLMTVNSVEERILAAARYKLNMDEKIIQAGMFDQKSTGSERHQFLQTILHQDD
AEDEEENEVPDDEAVNKMMARTEEEVEIFTKMDLERRREEAKSGTNRKSRLLEEHELPDW
LVKDDEEVERWAYDEDEDRFLGRGSRQRKEVDYSDSLTEKEWLKAIDEDGVEYEEEEEED
KEKKRGRKKRKKGEEDDEPIPKKRRGAGSSVDPKMKKAMKKLIMVVVNYTDSTDGRLLSE
PFMKLPSRRELPDYYELIKKPLTINKLLQKIEEGKYADFDELDKDFMQLCNNAQTYNKEA
SLIHEDSIVLQSVFTNARERLEAEGFNSDGDERDTGSAGNGEDGSDGDSSVRMKMKMKGR
KSEGRGGRRRRVTKKYISDDDDDPDDN
NT seq
5664 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtccttcgccacaaccatcgcctatgcaattgccacaagcgcagagtcctatg
ggcccaccgcaacaatctccatcgcattctacatctaatcctcagggtagtcccatgggc
ccaccccaacatcatcatcacggctccaatcaagattatcccggtggatcgcctatgccc
cctcaatctcaacaagtgcctccgtctcagcaacaacaacagggctaccctctacatcct
caacaaatgccgcctaacatgggaccacagagtcaaggtggtccaggtggtccagggcca
atgtcacagcaaggtaatgcaatgatgcctggtcagatgggaccaaatgtgccgccggga
ggtggacacatgggtccgggagggcctggccaaggagtgtcaggtggtccaggtcaaatg
ggccacggggggccaaaccctatgggaccaggaggtccgaatcaaatgggactgggtggt
ccaggacaaatgggaccgggtggtggtccgggtcatatgggaccgggagttccgatgcaa
atgggtcctggaggtcctgggcaaatgggtccgggaggtccggggcaaatggggccagga
gggccaggacagatggggcatgggcaaatgggcatgccgggacagatgcacggaccgaat
tcgatggggcaggggccggtgggacacatgggatcggggcaaggagcttcgggccacgga
ccgccgcacatgagtcaaggtgctccggggccacacatgggaccgggaggtccgcaaaat
ccgcaaatgggaccgggcatgcccggtcgcattcccccgggacacataaatgccagtcag
cctggtcatatgggtccgtcttcgggaccgatgactccgagcggtccggggcacatgggg
cccggtggttcgccgggtggtccgatgccaccgagtggtccgtcccacatggggccgagc
ggtccaaatgcgataaactcgaatcaaatgcctccgggttcgccgaatcaaatgggtctt
aacggaccaggacaaatggtcccaccgggaaacgccggacaaatgggatccaacggccat
ggccaaatgagtcccggtggaccggggcctatgggaccgaacggaccgcagatgggacag
attaatatgggaggcccggcaagtcagatgggaatgagtggacccggtggaatgatgagc
atgaatagtccggcgagccaagccggagctaacggaccgagaagccaaatgggcagcggc
gtaccaacgtccatgggtccggaaaacggccccggtgctcaaatgggcccgggatccggc
ccatccaatcaaatgagtgaaattcgtggatctatgcctccgaacgagagtcgcagccca
atgttacaagcagattcacgcggacctataggcccgatcaattcacctggacaaatgaat
cctggtggtcctggcggaccaatgaactcgggaggatcgactcctatgggacccgcgagc
agcggcgcacctcctccctctgtaggacccgctggacccgtacaaatgggccccaatgga
cctgtcaatcaaatcatcccacctggacccggaccacatggacctggcggcacctctccc
ggagcctccggacccggtcaggaaaatctcaatgctctacaaaaagctatcgactctatg
gaagaaaaaggactccaggaagatccccgatatgcacaacttctcgctctcagagctcga
caaggcaataacttgggagacaaacaagccttcagctcgcaacagttgcaacaattacgg
gtacagatcatggcgtacagattattagcgaggaatcaaccgctttcgcagcagctggcc
ctagccgttcaaggaggagcacctcctccttcaccctcaggtatgggacagcgtcctcca
gtggattcggcacaagcacccccggcttcgacgggtccgccaactccggttccgaatgcg
ttaggacccaacggtccaccgaggctcggggctcaaactcctcagcaacatcagccgcaa
caacctgtaccaaaaaccaatcgcgtaacaagcgtcgcgaagcctgtcgggttggatcca
cttttgattcttcaagaacgcgagaacagagttgcagcacgaatcgctttgaggaaagag
caattgagctaccttccgaccaacatgtccgaagaccttcggattcaagcacaaatcgaa
ttgcgcatgctcagagtgttgaatttccaacgccaattgcgatctgagatcatcgcttgc
actcgccaagatacaacactggagactgcggttaatgttaaggcgtacaaaagaacgaaa
cgacaaggtttacgagaagctcgagctacggagaaattggagaagcaacaaaaactcgaa
gctgaacgtaaacgcaggcaaaaacatcaggagttcctcacctcggtgctccagcatggc
aaagatttcaaagaattccatcgtaacaacgtcgcaaaattggctcgtcttaacaaagcg
gtgctcaattatcatgccaacgccgagagagaacagaaaaaggaacaagaacgtatcgag
aaagagcgtatgcgtcgtctcatggccgaggacgaagagggttacaggaagctcatcgat
cagaagaaagacaaacgtttggctttcctactctcacaaaccgacgagtacatcagcaat
ctcacggaaatggttaaacagcacaaaatggaacagaaaagaaaacaagttgaggaacag
aagcgtaaaaagaagaaaaagagaccacaggacagcgaagagggtgcaaacggcgacgat
gttcgcgtgagtgtcatcgagattgcgactggtaaaacgttgaccgacgaagacgctccg
ctcatgagtcaactctcggctttcctggagacacatcctggctgggaacctgtagaatct
gggagcgaaggtgacacggacgacgatgaagaaaatgaggagaaagatcgcgacagtgct
gaaaaagatgaacttgctgctgatatggcggaagataaagtgaagaaaaccctacaaaaa
gcgaaaatcgaggacgatgagtacaaaacagaggaacagacctattacagtattgctcac
actattcacgagagagttacggaacaagcatccattatggtcaatggaaaactcaaagaa
tatcaaattaagggtctcgaatggttggtgtctttattcaacaacaatttgaacggtatt
cttgcggacgagatgggtcttggcaaaacgattcaaacgattgcccttgttacttatctc
atggagttgaagaaagtgaatggaccatttttgatcatcgtaccactttcaactttgtcg
aattgggtgctcgagtttgagaaatgggcaccgagtgtcgtcgtcgtttcctacaagggt
tcgccgatagtgagaagggcgattcaggcgcaaatgcgtacaacgaagttcaacgttctt
ctgacaacgtacgaatacatcgtcaaggacaaaggcgttttggcgaaactccaatggaaa
tacatgataattgatgagggtcacagaatgaagaatcatcactgcaagctcacgcaagta
ttgaatactcattatctcgcgcctcatcgacttcttctgactggtacaccgctgcagaac
aaattgcccgaactgtgggctcttctaaactttttgctgccatcgatattcaagtcgtgc
agcactttcgagcaatggttcaatgctccattcgctacgactggcgaaaaagtcgagctc
aacgaggaagaaactattctcattattcgccgtttgcacaaagtcctcaggcccttcttg
ctgcgtcgtttgaaaaaagaagtcgagtcgcagctgcctgacaaagtcgagtacattatc
aagtgcgatatgtctggacttcaaaaagttttgtacaagcacatgcagagcaagggtgtt
ttgctgaccgatggctcagagaagggaaagaaaggcaagggtggtgcgaaagctctgatg
aacacgatagtacaattgcgaaaactttgcaatcatcccttcatatttcaagttatcgaa
gaaaagtattgcgaacacgttgggaccgggggcacatctgttgtatcaggccccgatctt
tatcgggcttccggtaaattcgagcttctcgatcgtatactgcccaagctcaaagcaacc
aaccatcgagtactgttgttctgtcaaatgacacaattaatgaccattatggaagattat
cttagctggagaggattcatgtaccttcgtctcgacggtacgacgaaagccgaggacaga
ggtgatcttttgaagaaattcaacgatcctggatccaactacttcctctttcttctgtcc
acgagagccggtggtctcggtctcaatcttcaagctgccgataccgtcattattttcgat
tccgattggaatcctcatcaagatttgcaggcgcaggatcgagctcatagaataggacag
aaaaacgaggtccgagtgctccggttaatgaccgtaaactccgtggaagaaagaattctg
gcagcagcgagatacaagcttaacatggacgagaagatcattcaagctggtatgttcgat
caaaagtccacgggctcggagagacaccagtttttgcagactattttgcatcaggacgat
gccgaggatgaggaagagaacgaggtacccgacgatgaagccgtcaacaaaatgatggcg
agaaccgaggaagaggttgagatattcacgaaaatggatctcgagagacgaagagaagaa
gctaaatctggaactaacagaaaatcgagattgctcgaggaacacgaactgccagattgg
ctcgtcaaggacgacgaggaagtcgagcgatgggcgtatgacgaggacgaggatagattt
ttgggcagaggctcgaggcagaggaaagaagttgattattcggacagcctcacggaaaag
gagtggctgaaagcgatcgacgaggacggtgtcgagtacgaggaagaggaagaagaggac
aaagagaagaaacgaggtcgtaaaaagaggaagaagggagaagaggatgacgagccgata
ccgaaaaaacgtcgaggtgccggaagttccgttgatccgaaaatgaaaaaagctatgaag
aaacttatcatggtggtcgttaactataccgacagcacggacggtcgattgctcagcgag
ccatttatgaagttaccctcgaggcgggaactaccggattattacgaattaatcaagaag
ccactgacgataaacaagcttttgcagaaaatcgaggagggaaaatacgctgactttgac
gagcttgataaggactttatgcaactgtgcaacaatgcccaaacgtacaacaaagaggcc
tcgctgatacacgaggattcgatcgtccttcaatcggtcttcacgaacgctcgtgaacgt
ctcgaggccgaggggtttaattctgacggtgatgagagagatactggttccgcaggtaac
ggcgaagacggttcggatggagattcgagtgtgagaatgaaaatgaaaatgaaaggacga
aagagcgaaggaagaggaggtcgacggaggagggtcacgaaaaaatacatttccgatgac
gacgacgaccctgatgacaactaa
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integrated database retrieval system
