Venturia canescens: 122410984
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Entry
122410984 CDS
T09386
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
vcan
Venturia canescens
Pathway
vcan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122410984
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vcan03041
]
122410984
Spliceosome [BR:
vcan03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
122410984
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GFIT
Motif
Pfam:
PRP38
PBP_like_2
Motif
Other DBs
NCBI-GeneID:
122410984
NCBI-ProteinID:
XP_043275427
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Position
5:12469918..12473501
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AA seq
399 aa
AA seq
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MQSQEMEAADGGSPWNESSGCEEERRSNLKEGKKSNVLPLWGNERTMNLNPLILTNIQSS
HYFKVNLYELKTYHEVIDEIYYKVSHLEPWEKGSRKTAGQTGMCGGVRGVGAGGIVSTAY
CLLYKLFTLRLTRKQLNGLINHPDSPYIRALGFMYIRYTQPPADLFSWYDEYLEDEEEMD
VKAGGGQVMKLGEILKQFLTKLEWFSTLFPRIPVPIQKDLEHRLGERFPQQTANARNAKP
PIILNNHGGKYSTNNGGNNAGRKDNGNGTTRNHQQPRHIPDSEAQWGEAERTSQWRARSD
EDRKEKHRERERERKRSRDRGERDSRRDKDKERDRHFRRSTSRDRNRRQREYRSRSRERS
HRDRSRDHHRERDRHRDRRGSPFDYAAELARERERQRRD
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgcagtctcaagaaatggaggctgctgatggaggttcaccatggaacgaatccagcgga
tgcgaagaagaacgcaggtccaatctgaaggagggtaaaaaatcaaatgttttgcccctg
tggggtaacgaaaggaccatgaacttgaatccattgattttaaccaacatacaatcttct
cactacttcaaagttaatctgtacgagcttaaaacttaccacgaagtcatagacgagatt
tattacaaggtatcacatttggagccatgggaaaaaggcagcaggaaaactgcaggacaa
accggcatgtgtggaggcgttcgcggtgtcggagctggtggaatagtctcgacggcatac
tgtctcttatacaagttattcaccctgaggttaactagaaaacaattgaatggtctcatt
aatcatccggattctccctatatcagagcactcggatttatgtacattagatacacacaa
cctcctgctgatttgttttcctggtacgacgagtatctcgaggacgaggaggaaatggac
gttaaagcaggtggaggtcaagtgatgaaacttggcgaaatattgaaacagttcctcacg
aagctcgagtggttttcgacattatttccgaggataccggtgcctatacaaaaagatttg
gagcatcgtttgggcgagcgatttcctcaacaaacggcaaacgcgagaaacgccaagcca
cccattattttaaataatcacggtggaaagtacagtactaacaacggtggtaataatgca
ggacgtaaggacaacggcaatggaactacgagaaatcaccaacagccaaggcatataccg
gacagtgaggcacagtggggagaagccgaaagaacgagccagtggcgagccagatccgat
gaggatcgcaaggagaagcacagggaaagagaacgtgagagaaaacgatcgcgagatcga
ggcgaacgcgactcgcgtcgcgacaaggataaggagagagaccgacacttcaggagatcg
acgagtcgcgacagaaatcggagacagcgcgaatacagaagtcgcagcagagaaagatct
catcgtgatcgtagcagagatcatcatcgggagagagacagacaccgtgatagacgaggt
tcgccgttcgactacgcagcggaattggcgcgcgagcgagagaggcaacgaagagattga
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