Venturia canescens: 122411045
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Entry
122411045 CDS
T09386
Name
(RefSeq) pseudouridylate synthase 7 homolog
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
vcan
Venturia canescens
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vcan03016
]
122411045
Enzymes [BR:
vcan01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
122411045
Transfer RNA biogenesis [BR:
vcan03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
122411045
Prokaryotic type
122411045
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Glyco_hydro_10
R3H
DUF4854
Motif
Other DBs
NCBI-GeneID:
122411045
NCBI-ProteinID:
XP_043275494
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Position
5:complement(7573892..7578072)
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AA seq
813 aa
AA seq
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MSWCDVKKSTRGYSRYGGRGNRGNRGEGNWRERTFENENEDGVRKQSGVYRGRGGYRGKS
FKRHGQGNSSYDSKRTKYKVGERLKEENVGVTEFVGSHKRFGGILKERFSDFHVNEIRCD
GEICKLTNQDIPPEPEELEDLSKLKESIPAELREQLEEFSKSDSEVSITEIDVTEMNKEL
RRNIHTIAKKITSVVSETVERGEKKILVLAKKDKQTSHKFRGDRRVDWSRREGNYCDFLL
HKVNMDTMDALNQLAAKLRIESSLFNYAGTKDRRAHTTQWVNIRKFSPKVIHDAARQVRG
AFVGNFKFSKNALSLGMLKGNRFKIALRSVNATDDEIELAMQSLKNNGFINYYGLQRFGT
IAAIPTHEIGKTLLQAKWKDAIDLILKPREGEQQRDMIEAREIYEKTKNPDLALRPIARS
GKIEAKLLYGLRKSGENNPQGALDYIPRNARLMYIHSYQSFVWNHMVSKRIKEFGAKPIV
GDLVYDKTNSEDNPGNETMDFAHLTDQSKEPKDGASDAIEEETIPTKLHEKHSIDDEQCI
EDRSDEIVDENETKIDNGDETPDDSRDPSSLPNVKSLSEEDLDRYTIADVVMPKPGWKVT
YPSYAKAWFDEFLARDDLTTDLRQKNKKYSLGGGYRKILETAEDLSWKIVRYDGYHDDLI
ASDIDEMRKVEAPKIETEGKHKALILEFSLNPSTYATMALREILEHDTSAQAQALQSTAN
QALENVEKIERNDQPDIANEEIVTEDNGSSVDVKNEEAKDNVTVDTNETEAEIIQNDSPQ
KNPESADADDMEISKEDVNIPYVDEKEEMETDK
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtggtgtgacgtcaaaaaatcaaccagaggttattcgagatatggcggtagagga
aatcgtggcaatcgtggcgaaggaaattggcgagaaaggacgttcgagaacgaaaatgag
gatggtgttcgtaaacaatccggagtctaccgtggtcgaggtggttatcgaggaaagtca
ttcaagcgccatggccaggggaacagttcctatgatagcaaacgtacaaagtacaaagtt
ggtgagcgtctgaaagaagagaacgttggcgtgaccgaattcgttgggagtcacaaacgt
tttggtggcatattaaaagagcgcttcagtgatttccatgtgaacgaaatacgctgtgac
ggggaaatatgcaaattgacgaatcaggatattccaccagagccggaagagctagaagac
ttgagcaagctgaaggaatctataccagcggagttgagggaacagttggaagagttttca
aagtcagatagcgaagtatcaataacagaaattgatgtgacggaaatgaacaaagaactg
cgtcgaaatattcacacgatcgccaaaaaaataacatcagtagtgagcgaaaccgtggaa
cggggtgagaaaaaaatattagttcttgccaaaaaagacaagcaaacgagccacaaattt
cgcggggatcgacgcgtcgattggagcagacgagaaggcaattattgcgactttcttctc
cacaaagtcaacatggatacgatggatgcgctgaatcaattagctgccaaattgcggatc
gaatccagcttatttaactacgcaggaacgaaagatcgacgagctcatacgactcaatgg
gttaatataagaaaattcagtccaaaagtcatccacgatgctgcgagacaagtgcgcggt
gcgttcgtcggaaatttcaaattttcgaaaaatgctctcagtttgggtatgctcaagggc
aaccgtttcaaaatagctttaaggagcgtcaacgctaccgacgatgagattgaactcgcg
atgcaatctctaaaaaacaatggtttcatcaattattacggacttcagagattcggcaca
attgccgccatacccacccacgaaatcggcaaaactcttctccaagccaagtggaaagac
gcgattgatctcattctaaaacctcgcgaaggtgaacagcaaagggacatgatagaagcg
cgtgaaatttatgaaaaaacgaaaaaccccgatttagcccttcgaccgatcgcacgatct
gggaaaatcgaagccaaactactttatggacttcgcaaaagtggggagaacaatcctcag
ggcgctctcgattatattccccgaaacgcgcggctcatgtacatacactcttatcaaagt
tttgtctggaatcacatggtttccaaacgcatcaaagaatttggggcgaaacctatagtc
ggtgatctcgtgtacgacaaaactaattctgaggataatcctggtaatgaaacaatggat
ttcgctcatctaactgatcaatcaaaagaaccaaaagatggcgcatctgatgcgattgag
gaagaaacaattccaacgaaattacacgagaagcattccatcgacgatgaacaatgcatc
gaagatcgttcagatgaaatcgtcgatgagaacgaaacaaaaatcgacaacggggatgag
acacccgacgattcaagggacccgtcgagtttgccgaatgttaaatcactcagcgaagaa
gatttggaccgctatactatcgccgatgttgttatgcccaaacccggatggaaagtcacc
tacccttcgtatgcaaaagcctggttcgatgaatttcttgccagggacgatttaaccacg
gatttgaggcaaaaaaacaagaaatacagtcttggtggtggataccgaaagatattagaa
accgctgaagatctaagctggaaaatagtccgatatgacggttaccacgatgacttgatc
gcttctgacattgatgaaatgcgtaaggtggaggctcccaaaattgagactgagggtaaa
cacaaagcattgattctcgagttttccttgaatccatcgacgtacgcaacgatggcactt
cgagaaattctcgaacacgacacatcggcacaagcgcaagctttacagtcgacggcaaat
caagcgctcgaaaatgtcgaaaaaatagaaagaaacgatcagcccgatatcgcaaatgag
gaaattgtcaccgaggacaacggttcatcggtggacgttaaaaacgaggaagccaaggat
aatgtaacagttgatactaacgagactgaagcggaaatcatccagaacgattcaccacaa
aaaaatccggagtcagcagatgccgatgacatggaaatttctaaagaagatgtgaacatt
ccgtatgttgatgaaaaagaagaaatggaaacagacaaatag
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