Venturia canescens: 122411207
Help
Entry
122411207 CDS
T09386
Name
(RefSeq) ATP-dependent helicase brm-like isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
vcan
Venturia canescens
Pathway
vcan03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122411207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vcan03021
]
122411207
03036 Chromosome and associated proteins [BR:
vcan03036
]
122411207
Transcription machinery [BR:
vcan03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
122411207
Chromosome and associated proteins [BR:
vcan03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
122411207
Chromatin remodeling factors
BAF complex
122411207
PBAF complex
122411207
GBAF(ncBAF) complex
122411207
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
Bromodomain
BRK
ResIII
QLQ
HDA2-3
DEAD
NirdL-like_HTH
Motif
Other DBs
NCBI-GeneID:
122411207
NCBI-ProteinID:
XP_043275771
LinkDB
All DBs
Position
5:complement(1250863..1276889)
Genome browser
AA seq
1835 aa
AA seq
DB search
MASPSPQSSPMPPPQAPSPLGPPQQSPSSASNPQGSPMGPPGHHAHSPTQVYAGGPPPQG
GPPMSQPQQQSIPSQQQGYPPHSQQMPPNIGPQGQGGPGGPIGPGPGQQAGNSMGAGQMG
HGTPSQMGPGGPSPMGIGGPGHMGPGGSIQMGPSQLGPGGLGQMGIPGQMLGGPGAMGPG
VQGGHLGPGQGPPGHGGASVGHQASPHMVQSGPGQHMGPQNPQMGTHIGVAPNSGHINAG
QPGHMGPMSQSAAAHMGSPMGLTVPGQMGPASNSGPMGPNGNPGHGQSPNGPGQMSMSGG
AASQLGMSGPGGQMSPSGPGVQMPPNAPGSQMGPMGPMSNPGGQVGPSGPGNQIGQAASM
GSGGPIGSGGSPSSHMPLGSGPGSQMGESRVPMGPSEARGPMGPANTPGQIASSGPGVQI
SSGGPTQQMGPGTGAGLPTGPVTQMSQTGSAGSVSVSSAGTGQENLNALQKAIDSMEEKG
LQEDPRYSQLLALRARQGNMGEKQTFSSQQLQQLRVQIMAYRLLARNQPLSQQLALAVQG
GAPPPPPPPPPPPPPPPPSGMGQRTTDPIQTTPGPVGPQITGPNALGPSGPPRPGAQTPQ
HQQLQQPGPKTNRVTSVVKPAGLDPLLILQERENRLTARIASRMEQLSNLPTNMPEDLRL
QAQIELRMLRVLNFQRQLRSEIIACTRKDTTLETAVNVKAYKRTKRQGLREARATEKLEK
QQKLEAERKRRQKHQEFLTSVLQHGKDFKEFHRNNVAKLARLNKAVLNYHANAEREQKKE
QERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNLTEMVKQHKMEQKRK
QVEDEKRKKKKRLQVGENGEETANGEDRRVGVIEVATGRTLTGDEAPLTSQLAAFLESHP
GWETIDSDSEDDEEDEEESEEKVNGTIAKRTSKNNSFNFFFNFLTKKIISLIIAEEKATS
DMEEEKAKKTLHKAKVEDDEYKTEEQTYYSIAHTVHESVTEQASIMVNGILKEYQIKGLE
WLVSLFNNNLNGILADEMGLGKTIQTIALVTYLMEQKKVNGPFLIIVPLSTLSNWVLEFE
KWAPSVVVVSYKGSPAGRRAIQSQMRATKFNVLLTTYEYVIKDKSVLAKLQWKYMIIDEG
HRMKNHHCKLTQVLNTHYLAPHRLLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWF
NAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCDMSGL
QKVLYKHMQSKGVLLTDGSEKGKQGKGGAKALMNTIVQLRKLCNHPFMFQVIEEKYCEHI
GKPGSGVVSGPDLYRASGKFELLDRILPKLKATNHRVLLFCQMTQLMTIMEDYLGWRGFM
YLRLDGTTKAEDRGDLLKKFNDPGSEYFLFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQ
DLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQKSTGSE
RQQFLQSILHQDDAEDEEENEVPDDETVNQMIARSEGEFEIFQKLDLERRREEAKSGSNR
KSRLLEETELPDWLVKDDDEVERWTYEEDEDRFLGRGSRQRKEVDYSDSLTEKEWMKAID
DDGVEFEEEEDDDKKKKRGRKRRKKGEEDDEPTPKKRRGIGSSIDPKVKRAMKKLIMVVV
NYTDSTDGRLLSEPFMKLPSRRELPDYYEIIKKPLTINKLLQKIDEGKYADFDELEKDFM
QLCKNAQIYNEEASLIHEDSIVLQSVFTNARERLETEGTNSDGDERGEVEDCSDGDSSIR
MKLKMKGRKGEGRGGRRKRVTKKYISDDDDDGDDN
NT seq
5508 nt
NT seq
+upstream
nt +downstream
nt
atggctagtccttcgcctcagtcgtctccgatgcctcccccgcaagctcccagtccgctg
ggaccgccgcaacagtcaccgtcttcagcctccaacccgcaaggcagtcccatgggtccg
cctggacatcacgctcacagcccaacgcaggtttatgccggagggccgccgcctcagggc
ggccctcccatgtctcaaccgcaacaacaatcgataccctctcaacaacaaggttatcct
ccgcattcgcaacaaatgccgcccaacatcggaccacagggtcagggcggtcccggcggc
ccgatcggtccagggcctggacagcaggctggaaattccatgggagccggacaaatgggt
catgggactccgagccaaatggggccaggggggccgagtccgatgggcatcggtgggccc
gggcacatgggacccggaggctccatacaaatgggtccgagtcagttggggccaggggga
ctcggacaaatgggtatacctggacaaatgctcggtggcccgggcgcaatggggcccgga
gttcaaggcggccatttgggacccggacaagggcctccgggccacggcggagcatcggtc
ggacaccaggcttcgccgcacatggtccaaagcggcccggggcaacacatgggacctcag
aatcctcagatgggaacacacatcggagtagctccgaattccggacacatcaacgccggt
caacccggacacatgggcccgatgtcacagagcgccgctgctcacatggggagccccatg
ggcctcaccgttcctggccaaatgggcccggcgagtaattccgggccgatgggacccaac
ggtaatcctggtcacggccaaagtccgaacggtccggggcagatgagcatgagcggagga
gcagcgagtcaactgggaatgagcggaccgggtggccaaatgagtccgagcggtccaggt
gtccagatgcctccgaatgctcctgggagccaaatgggtccaatgggtccaatgagcaat
ccagggggacaagtgggtccgagtgggcctggaaaccagattggacaagcggcctcgatg
ggctcgggaggtccgataggctccgggggaagtccgagttcccacatgccgttgggaagt
ggaccgggcagccaaatgggcgagagtcgcgttccgatgggcccgagtgaggcccgaggt
ccgatgggcccggcgaatacacccggacaaatcgcgagctccggtcccggcgtacagatc
agctctggtgggccgacgcagcaaatgggaccggggaccggcgcaggactgcccaccgga
cccgtcactcaaatgagtcaaacgggatccgccggaagcgtgagtgtttcgtccgctggt
acgggacaagaaaatcttaacgctctccaaaaggccatcgactcgatggaggaaaaagga
cttcaggaagacccgcgttactcccaactcctcgctctgagggctcgccagggcaacatg
ggcgaaaaacaaactttcagctctcagcaacttcaacagctacgcgtgcaaataatggcg
tacagattgctagcgcgcaatcaaccgctctcgcaacaattagcgctcgcagttcaaggt
ggagctccaccaccaccacctccccctcccccgcctcccccaccgcctcctccttcaggt
atgggacagcgtacgaccgatccgattcaaacgaccccgggtccggtgggtccgcagatt
actggtcccaacgctctcgggccttccggcccaccgaggcctggtgcccagacgccgcag
catcaacagctccagcagcctggaccaaagaccaatcgggttacgagtgtcgtgaaacca
gctggattggatccgttgcttattcttcaagaacgtgaaaacagactcaccgcgagaata
gcttcaaggatggagcaactgagcaaccttccgaccaatatgcccgaagatcttcgtctt
caagctcaaatagaattgcgaatgctcagggtactaaatttccagcgacagctacgatcg
gagataatcgcttgcactcgtaaagatacaacactggagactgcggttaatgttaaggcg
tacaaaagaacgaaacgacaaggtttgcgagaagctcgagctacggagaaattggagaag
caacaaaaactcgaagctgaacgtaaacgcaggcaaaaacatcaggagttcctcacctcg
gtgctccagcatggcaaagatttcaaagaattccatcgtaacaacgtcgcaaaattggct
cgtcttaacaaagcggtgctcaattatcatgccaacgccgagagggaacagaaaaaggaa
caagaacgtatcgagaaagagcgtatgcgtcgtctcatggccgaggacgaagagggttac
aggaagctcatcgatcagaagaaagacaaacgtttggctttcctactctcacaaaccgat
gagtatatcagcaatctcacggaaatggtcaaacagcacaaaatggaacaaaaaagaaaa
caagttgaggacgagaaaaggaagaagaagaagaggttgcaggttggtgaaaatggtgaa
gagactgctaatggcgaagacaggcgcgtcggtgttatcgaggttgcgactggacgcacg
ttgaccggcgacgaagcacctctcacgagtcaactcgcagctttcctcgaatcacatccg
ggctgggaaacgatagattctgatagcgaggacgacgaagaagacgaagaagaaagtgaa
gaaaaagtaaatggtacgatcgcgaaacgaacgagtaaaaataatagttttaattttttt
tttaatttcttgacaaaaaaaattatttcgttgataatagctgaagagaaagctaccagc
gatatggaggaggagaaagctaagaaaacccttcacaaagctaaagtcgaagacgacgaa
tacaaaacagaagaacaaacttattacagcattgctcatactgttcacgaaagcgttacg
gaacaggccagtattatggtcaatggcatccttaaggaatatcagatcaagggtctggag
tggctagtgtcgttgttcaacaacaatctgaatggaattctcgccgacgagatgggtctc
ggcaaaacgattcaaacgatagctctcgttacatatctcatggaacagaaaaaagttaac
ggacctttcctaataatcgtgcctctttcaactttgtcgaattgggtactggaattcgag
aagtgggcacccagcgttgtagtagtttcttacaaaggttcgccagcaggcagaagagcg
attcagtcgcaaatgcgtgcgacgaaatttaacgttcttttgactacttacgaatacgtc
ataaaagacaaatcggtcttggcgaagctgcagtggaaatatatgataatcgacgaaggt
cacagaatgaagaaccatcactgcaaactcacgcaagttttgaacactcattatctcgcg
cctcatcgacttctcctgaccggtacacctcttcagaacaaattgcccgaactgtgggct
cttttaaactttttactgccatcgatattcaagtcgtgcagcactttcgagcaatggttc
aatgctccattcgctacgactggcgaaaaagtcgagctcaacgaggaagaaactattctc
attattcgccgtttgcacaaagtcctcaggcccttcttgctgcgtcgtttgaaaaaagaa
gtcgagtcgcagctgcctgacaaagtcgagtacattatcaagtgcgacatgtctggactc
caaaaagttttgtacaagcacatgcaaagcaagggtgtcttgctaaccgacggctcggaa
aaaggaaaacagggcaagggtggtgcgaaagctctgatgaacactatagtacaattgcga
aagctttgtaatcatccattcatgtttcaagtaatcgaagaaaagtactgcgagcacatt
ggcaaaccgggcagcggcgtagtatcgggccctgacctttatcgggcttctggaaaattc
gaactgctcgatcgcatcttacctaagctcaaagcgaccaatcatcgagtattgctcttc
tgtcaaatgacacaattgatgacaattatggaagattatttgggctggcgaggattcatg
tatcttcgtttggacggtacaacaaaagcggaagatcgtggtgatcttctgaaaaaattc
aatgatcccggatccgaatatttcctttttctgttgtccacccgagccggtggtctcggt
cttaatctccaggctgccgataccgtcattatttttgattccgattggaatccccatcag
gatttgcaggcgcaggaccgagctcacagaataggacagaaaaacgaggtccgagtgctc
cgattaatgaccgttaattccgtagaagaaagaattttagcggcagcgagatacaagctc
aatatggacgagaaagttattcaagctggtatgttcgatcaaaagtcaacgggatcggaa
agacaacagtttttgcagagtattttgcatcaggacgatgccgaggatgaggaagagaac
gaggtacccgacgatgaaactgtcaatcagatgatcgcgagaagcgaaggcgaattcgaa
atttttcagaaattggacctggaaaggcgaagagaagaagccaaatcaggatccaacaga
aaatctcggctgctcgaagaaactgaattgccagattggctggttaaggacgatgacgag
gttgaacggtggacttacgaggaggatgaagatcggtttttgggcagaggttcgaggcaa
cgaaaagaagtcgattactcggatagtcttactgaaaaagaatggatgaaggcgatcgac
gatgacggtgtggagttcgaggaagaagaagatgacgacaaaaagaaaaaaagaggccga
aaacgaagaaagaagggcgaagaggacgatgaacctacaccgaaaaaacgtcgtggtatc
ggttcgtccattgacccgaaagtgaaacgagccatgaaaaaacttatcatggtcgttgta
aattataccgacagtactgatggtcgattgctcagcgaaccatttatgaaattaccatcg
agacgcgaattaccagattattacgagataatcaaaaaaccattgacgataaacaaatta
ttgcagaaaatcgacgaaggaaagtacgctgattttgacgagctcgaaaaggattttatg
cagctgtgcaaaaatgcacaaatttacaacgaggaggcgtccctgattcatgaggattcg
atagtgctacagtcggtattcacaaatgcccgcgaacgtctagaaacagaagggacgaat
tcggacggtgacgaaagaggtgaagttgaggattgctcggacggagattcaagtatacga
atgaaattgaagatgaagggtcgcaagggtgaaggaagaggaggtagaagaaaaagggta
acgaagaagtatatatccgacgacgacgacgacggagacgacaattga
DBGET
integrated database retrieval system
