Venturia canescens: 122411747 Help Entry 122411747         CDS       T09386                                  Name (RefSeq) collagen alpha-1(IV) chain-like   KO K06237   collagen type IV alpha Organism vcan  Venturia canescens Pathway vcan04512   ECM-receptor interaction vcan04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:vcan00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     122411747  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     122411747  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:vcan04147]     122411747    00536 Glycosaminoglycan binding proteins [BR:vcan00536]     122411747 Exosome [BR:vcan04147]  Exosomal proteins   Exosomal proteins of other cancer cells    122411747 Glycosaminoglycan binding proteins [BR:vcan00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    122411747 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  122411747 NCBI-ProteinID:  XP_043276741 LinkDB All DBs Position 5:10537109..10572241 Genome browser AA seq 1835 aa AA seqDB search MGPRGGFLTSCGRLQNSRTLFLPIFILGLFILLIELSTLTEAVECKTAKCNCTGIKGESG FPGVPGPQGPEGPPGEIGPDGPIGPKGEKGAGGEYGGTGEKGYRGDTGIRGATGEPGTSG NPGIAGLTGPDGLDGCNGTDGRAGAPGMPGDYGERGPDGFPGEQGPAGEPGDGGVNSIGV KGERGVPAASGPKGYDGPRGIPGEPGFQGEQGEPGFPGPPGLPGMQGEPGTPVYGDKGSV GEEGDRGEQGKSAGFEWSKRNFVDGPPGAKGIRGDRGDRGRKGEFGATGPHGRPGTPGLK GMKGDQGDDGPRGKQGIEGVAGPAGEKGEKGAPGYAGEPGDDGLDGEEGEIGNMGSPGKQ GAAGEPGAYVPELDEIIVGNIGIQGPVGPPGEKGPSGTPGTRGLTGYIGPPGLPGPPGIP GEKGRKGSSIKGEQGDDGLTGQMGPQGLIGLPGLPGPIGAKGFAGLTVIGPPGLEGQPGL PAFNGPPGDRGDPGPPGDKGFPGKGIRIRGPPGEPGLPGIPGRVGPDGWPGVPGLKGKRG PQGDDCGVCQPGLPGVKGETGDAGINGYPGSPGFAGLPGPRGFKGAQGKTGPKGPRGLDG ADGRPGIAGSQGPKGEHGYIIWPPGGQDKGWDGDFGDKGFPGPEGPAGLPGAIGETGDSG PPGPKGEKGDLGAPGLSGTDGRPGWNGAPGAKGEPASVPIEFLRGDPGLPGADGLPGLPG DTGAKGEPGEAAEHTGLHVKGEKGFLGEPGDRGFPGRKGYQGITGPEGFPGAPGLTGDPG ISVQGSRGLKGYPGMPGDQGPRGITGAPGLPGPPGFDGLPGPKGDRGDVGSNLNYGDIGR RGFLGQKGNIGDAGPAGYRGRPGRPGTVGLRGPKGAPGFEGWAGEKGVKGVRGDSIQGVR GYPGPPGRNGTRGWIGDVGIKGGDGYPGFEGMKGLKGEIGFHGRQGEDGDQGPLGYEGMA GLAGSPGSPGPDGDVGEIGAPGLPGWPGAEGEPGIIGLKGEQGDKGPHGPTGLPGPDGFK GITGDMGLDGFDGEQGESSFSGPQGDIGEPGFMGEIGPPGLPGFDGRPGAPGEVGPESVG FDGLAGEKGDRGFDGRNGLPGIKGEFGDMGLDGFKGERGDVGPKGHPGSHGYDGRHGAKG EIGPMGPTGFNGPKGKRGFEGDPGLMGRPGMPGDPGPIGLPGFEGQVGRKGEIGEPGLPS FYEVTYGDFGEQGLDGLPGRKGALGDTGPAGFPGPKGERGDDGLQGVDGFEGLEGLPGLP GDEGLRGLPGAPGMFAERGDEGRAGLDGQPGIPGRPGQKGAPGEYGRNGPKGISGEPGRI IPGPKGIHGDPGPRGYPGRPGNPGEIGMPGFPGFEGPKGFVGEPGFSASAAKGEVGDIGW PGFDGQPGLKGMRGDSGQNGAPGAPGFKGETGEPGEPGIPGLDGPDGPQGPKGDRGQNPF PPFPRKGLTGDTGAPGLSGFPGPNGMMGMPGLDGLPGQDGERGMTGPHGPPGPEGEYGRP GQEGVRGPPGYQGPPGFAGAPGDQAPPGPGPRSRGFHFARHSQSEMIPQCPRNTVKLWDG FSLLHIMGNGHPWAQDLGAAGSCVAKFSTMPFMFCNLNNVCDYAQRNDYSYWLSSTEPMP MMMTPIPAPEVGRYISRCVVCEAPTRMIAVHSQSMAIPECPGGWEEAWIGYSFLMHRDAG AAGGGQSLVSPGSCLEEFRTRPFIECRGLGTCNYFSTAVSYWLATIKDFEMFRKPQQQTL KADHTSRVSRCAVCKRRQITEDLNNNRLKPFNSNGHRYPPPNVEDRENIERLPDWPRRRP QGGEARGPRPPYNRAPGQYRRRGRPRRPEQPNARA NT seq 5508 nt NT seq  +upstreamnt  +downstreamnt atggggcccaggggtggttttctcacctcctgtggtcggcttcaaaattcgaggactctt ttcctgccgatatttatcctcgggcttttcattctcctcatcgaactttctactctcacc gaagctgtggaatgcaaaactgcgaaatgcaactgtaccggaataaaaggagagtcagga tttcccggtgtcccaggacctcagggacccgaagggccccccggtgagattggtcctgac ggccccatcggaccaaaaggcgagaaaggcgcgggcggagagtacggaggaacgggcgaa aaaggttatcgaggcgatactggtatacggggcgcgacgggcgagcctggaacttcgggt aatcctggtatagctggtctcaccgggcctgacggtctcgatggctgcaatgggactgat ggccgcgctggggcaccgggtatgcccggagactatggagaaagaggccctgacggtttt ccgggtgaacagggccctgcgggtgaaccaggagacggcggagtcaattccatcggcgtg aaaggagaacgaggagtccctgctgctagtggacccaagggctatgatggtcctcgaggt attcctggtgaaccagggttccagggagaacagggagaacccggttttccgggacctcct ggacttccgggaatgcaaggggagcccggaactccggtgtatggtgataaagggtcagtg ggcgaggaaggcgatcgtggagaacaaggaaaatctgcagggtttgagtggagtaagcgt aacttcgtagacggtcctccaggagcaaagggtattcggggggataggggtgatcgtgga cggaaaggtgaatttggggcgacaggtccccatggtcgtccaggtacaccaggcttgaaa gggatgaagggagaccagggtgatgatggaccacgaggaaaacaaggtatcgaaggtgta gccggtccagccggtgaaaagggcgagaaaggtgccccaggttatgcgggagagccaggc gatgacggattagacggtgaagaaggagaaataggtaacatgggatcgccaggaaagcaa ggagcggctggtgaaccaggagcgtacgtaccggaactagacgagatcatagtgggaaac atcggaatccagggtcccgttggtccacccggtgaaaagggtccttcgggaactccagga acccgtggattgacggggtacatcgggccgccgggactcccaggcccgccgggtataccg ggtgaaaaagggcgaaaaggttcttcgatcaagggcgagcaaggggacgatggtttaacg ggtcaaatgggaccgcagggtctcatagggcttccaggacttccaggacccataggagcc aaaggatttgctggtttgacggtcattggaccgccaggcctggaaggtcaacctggtcta cctgcattcaacggtccacccggcgatcgcggtgatcctggtcctccgggtgacaaaggt ttccccggtaaaggtataaggattcgtggtccaccaggagagccaggattaccaggaatt ccgggacgcgttggccccgacggttggccaggagtgcccggtctaaagggtaaacgcgga ccacaaggagatgattgcggcgtttgccagcccggcctacctggcgtcaagggagaaact ggagatgcaggaatcaatggttacccgggctcacccggattcgctggacttcccggaccg agaggattcaaaggcgcacaaggcaaaacaggtcccaaaggtcctcgcggcctcgatgga gctgatgggcgacctggaatagctgggtcgcaaggaccgaaaggtgaacatggttatatc atctggccacccggaggccaagacaaaggatgggatggcgacttcggggacaaaggattt cccggaccagaagggcccgccggcctgcctggagccatcggcgaaactggcgattctgga ccaccaggtcccaaaggtgaaaaaggcgacctcggtgctcccgggttatccggaaccgac ggccgccccgggtggaacggcgcacccggtgctaaaggcgaacctgccagtgtaccaata gagttcctccgcggtgatcctggattgcctggagctgatgggttaccaggacttcccggt gacaccggagccaagggagaacctggcgaagctgctgaacatactggcttacacgtcaaa ggggagaaaggattcttaggcgaacctggcgaccgcggtttccctggtcgaaaaggatat caagggatcactggtcccgaaggattccctggtgctcctggcttaactggtgaccctggt atttcagttcaaggatccagaggtcttaaaggatatcccggtatgccgggagaccagggt ccccgtggaataaccggcgctccaggtctacctggtcctccaggatttgacggtcttcca ggtccaaagggtgatcgtggtgacgtcggatcgaatttgaattatggcgatatcgggcga cgtggtttcctaggtcagaaaggaaatatcggagatgcaggtcccgcagggtacagaggt agacccggtagacccggcacggtagggttacgcggacccaaaggagctccagggttcgag ggctgggcaggagaaaagggtgtcaaaggtgttagaggcgacagcattcaaggagtacgt ggatatcctggaccaccaggtagaaatggaactcgaggatggattggagacgtcggcatc aaaggtggcgacgggtaccccggcttcgagggcatgaaaggtttgaaaggagagatcgga tttcacggacgtcaaggggaagatggagatcaaggtcctttgggttacgagggtatggcg ggattggccggttcgccaggttcccccggtccggatggcgacgtcggtgaaattggtgct ccaggactccccggctggccgggagcagagggcgaacccggaataattggtttgaagggc gagcaaggtgataaaggaccgcatggacctacggggcttcctggccccgatggtttcaag ggtataaccggtgacatgggtctcgatggattcgatggtgaacaaggtgaaagttcgttt agtggacctcaaggtgacatcggcgagccaggatttatgggagaaattggaccacccggt ctccctggtttcgatggcagacccggagctccgggcgaagttggaccagaaagcgttgga ttcgatggcctggctggagagaaaggtgacagaggcttcgatggccggaatggactaccg ggaatcaagggagaattcggtgacatgggtctcgatggattcaaaggcgaaagaggtgat gtcggtcccaaaggacatcctggatcccacggttatgatggtcgccatggcgccaaaggg gaaatcggacctatgggacctacgggctttaacggtccgaaaggaaaaagaggatttgag ggtgatccaggtttaatgggacgtcctggtatgcccggtgatccagggccaatcggattg cctggtttcgagggtcaagtaggaagaaaaggtgaaatcggtgaaccaggattaccttca ttctatgaagtaacgtacggagattttggtgaacagggactcgacggtttgcccggtcgc aaaggagccttaggagatactggaccagccggttttcctggaccgaaaggagaacgcgga gatgatggattgcagggcgtcgatggttttgaaggattggaaggactccctggccttccg ggtgatgaaggacttcggggattaccaggagctccaggaatgttcgccgagcgaggtgac gaaggacgcgctggactcgatggacagcccggtattccaggacgtcctggacaaaaagga gcgcctggtgaatacggcagaaatggtcccaaaggaatttccggtgaaccgggtagaatc attccaggaccgaaaggaattcatggagatccaggtcctcgaggttatccgggtcgccct ggaaaccctggtgaaattggtatgcccggttttcccggattcgagggcccgaagggtttc gttggtgagcccggattctcagcgagcgcggcgaaaggtgaagttggtgatatcgggtgg ccaggattcgatggtcaaccgggtctcaaaggtatgagaggagactcgggtcagaacggt gcgcccggagctcctgggttcaagggcgagacgggcgagcctggcgagcctggcattcct ggcttagatggtccggacggaccgcagggacccaaaggagacagaggtcagaatccattc ccgccgttccccaggaaaggtctcaccggtgacacgggagcccctggcttatccggattc cctggtccaaatggaatgatgggcatgcctggtctggacggtctaccgggtcaggatggt gaacggggtatgaccggtccccacggtccccctggtcccgaaggtgaatacggccgaccc gggcaggagggagtccggggtccaccgggttatcaaggaccgccaggttttgccggagca cccggagaccaagccccgccgggtccaggacccaggagtcgaggtttccatttcgcgcgg cactcgcaatccgagatgattcctcagtgtcctagaaatactgtgaaactttgggacggt ttttcacttctccacatcatgggcaacggccatccgtgggcccaagaccttggtgcggcc ggaagttgcgtggcgaagttctcgacgatgcctttcatgttctgtaacctgaataacgtt tgtgactacgctcagcgcaacgactacagttattggctcagttcgacggaaccgatgccg atgatgatgacgccgattccggcacccgaagtcggaagatacatatcaagatgcgttgtt tgcgaagcccccacgagaatgattgccgttcacagtcaatccatggccattcctgagtgt cccggtggatgggaggaagcttggatcggttacagtttccttatgcacagagacgcagga gcagcaggcggcgggcaatcgctcgtctcgccgggttcctgtttggaggaattccgtacg agaccgttcatcgagtgccgtggtttgggcacttgcaattacttctcaactgcagtctcg tactggctcgcgacgataaaggatttcgagatgttccggaagccacagcagcaaactctc aaagccgatcacacgtcgcgagtgagtcgttgcgcggtttgcaaacgtcgacaaataacg gaagatctgaacaacaaccgattgaaaccgttcaattcgaacgggcatcgctatccacct ccgaacgtcgaggatcgagaaaacatcgagagattacccgattggccgaggagacgtccg caaggcggtgaagctcggggcccgagacctccgtacaaccgcgcacccggccaatatcgt aggcgaggtcgccctcgccgacccgaacaaccgaacgcgagagcgtga

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