Venturia canescens: 122411929
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Entry
122411929 CDS
T09386
Name
(RefSeq) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
vcan
Venturia canescens
Pathway
vcan03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122411929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcan03000
]
122411929
03021 Transcription machinery [BR:
vcan03021
]
122411929
Transcription factors [BR:
vcan03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
122411929
Transcription machinery [BR:
vcan03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
122411929
RNA polymerase III system
TFIIIB
122411929
RNA polymerase I system
SL1/TIF-1B
122411929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
SOG2
Med3
Motif
Other DBs
NCBI-GeneID:
122411929
NCBI-ProteinID:
XP_043276984
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All DBs
Position
6:6553634..6556236
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AA seq
316 aa
AA seq
DB search
MDQMLPSPGFSIPSIGTPLHQPEEDQQILPNALQQQQQQQQQQQQQQTSQQYQMQQLHSM
SPTMQANSMMMLSTPQKTMHTYAPTPTFATPQSLMQPQTPQNMMSPMVQPTSQIAPSSIG
PSTPGPMTPMTPASADPGILPQLQNIVSTVNLTCKLDLKKIALHARNAEYNPKRFAAVIM
RIREPRTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSC
DVKFPIRLEGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRQEIY
EAFDNIYPILKSFKKQ
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaatgttaccaagtccgggattcagcatccccagtatcggcacacctcttcat
caaccggaagaggatcaacaaatcttacccaatgctttgcaacaacaacagcagcagcag
caacaacaacagcaacaacaaacctcgcaacaatatcaaatgcaacaacttcattctatg
agcccaacaatgcaggccaattccatgatgatgctttctactccccaaaaaacaatgcat
acttatgcacctacgccaacttttgctacaccacagagtctcatgcaacctcagacgccg
caaaacatgatgtctccgatggtacagccaacgagtcaaatagcaccatcgtctataggt
ccgtcgactcccggaccaatgacaccgatgactccagcatccgcagatcctgggatccta
ccccaattgcaaaacattgtttccactgtcaacctgacttgcaagctggatttgaagaaa
atagctttacacgcgagaaacgccgaatataatccaaagcgattcgctgccgtcattatg
agaattcgtgaaccaaggactacggctcttatttttagtagtggaaaaatggtctgtaca
ggagccaaaagcgaagaagactctcgcctcgcggctagaaaatatgctcgcatcattcaa
aaacttggctttccagccaaatttttagacttcaaaattcagaatatggtcgggagctgt
gacgttaaatttcctattagactggaaggactcgttttgacacacggtcaattctcttcc
tacgagcctgaattattcccaggcttgatttatcgaatggtcaaacctcgaatcgtcctc
ctcatttttgtttccggcaaggttgtactcaccggtgctaaggtccggcaagaaatttac
gaagcgtttgacaacatttacccaattctaaaaagttttaagaagcaatga
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integrated database retrieval system