Venturia canescens: 122411974
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Entry
122411974 CDS
T09386
Name
(RefSeq) girdin isoform X1
KO
K25392
girdin
Organism
vcan
Venturia canescens
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
vcan03037
]
122411974
Cilium and associated proteins [BR:
vcan03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
122411974
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HOOK_N
HTH_19
Motif
Other DBs
NCBI-GeneID:
122411974
NCBI-ProteinID:
XP_043277073
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All DBs
Position
6:complement(13813607..13821422)
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AA seq
1271 aa
AA seq
DB search
MASSQIDEFLAGPLVTWFVSCLEDPDSLTNYNDLVDGVLLHSVFLQIDPEPLYDGVVPTG
GNHTLRAKNLKTIVGNIKQFYEEELGHLIIKQPDTENLGKEPESHVQDARLLLLLLLGCA
VQCPNKKQFITKIKTLNLDTQLAIVDCIKQVTDQPDIVITQDSMENANLAGLFKQIKQLL
QERDLYREKCAVINNMSGTNDCPVDPESEEGVKKAQSTQAKLEREENHHFAVELADWKSK
VRKQRQELEEKTEALLECKEELEHNKASLAKLKQENQELMHEARTAKSYRDELDAVNERA
ERADRLEMEVARYREKLTDIEFYKTRIEELREDNRVLMENREMLEEQLNSSRRRADKVLE
LEAQIIEYKQLVNEMALERTAEKEKYQELFEENSQLHRLKKAAAEEAALAGSISETEEPD
TSDNRLSEQLTNNAQTRALKLELENRRLNTLIDTLKENSFHETSSRVLELEKEKKKLSLK
IESLNDGNERLCQQNSDLELVCRQALEENKKLQDTLKNQRASFERQQQEYQIQHNKILQL
ENNYDGVIKEKQRIQSLLESVQRRADDLDRSLEIANQKLEGLKNVENSAEKTESKCSELE
MKIAMLEKDKESALRDIYKYRETIEEKDVALDTSTNNVEVLERRVSQLENERDVYIEQIT
RLQEIERSSKELDSRAAIDRETLETLQSNLVAEKLNSQRLYTVLEKFGLNAEMLLTLPSD
NILKRISQIPEVVEYIKSSIVTETTCNCNEKMPDVKVVASAYDASVNMNLQEIIETQRRE
IENLSKRSNTSQARAEQLKSEKAQLQVSVTTLQSQSTSLTTQHTALQLANSQLVAEKEEL
LKDRIAQQRAHSQLVNDQVTLQSLHEQLNNEYENLLLERETLKGQLRDVKNMNRALNESC
ERLEAKNKALIADHEIAVTHVKSLNNLRGEHSKLKEDFRNLYTAMEKLKIEYRNLQEDYR
KNKIEMNRLSLKETEMQGEMSTRDDKCATMELQISKLNERCEMLMQMNSGLDSNRRSLMD
HISLLFSQYHELLTHSLEDKEHYHMEEKLYTDKVNHLYRQKEKLEEKIMEHYRKLESCST
KNRRFGANFVSRIRKAGSELLKNRRSWADDSKQLESGKIYETESGSNDSDASIDDHRVTG
LVDPVVLEGDALSLGHPGTRRTVYYTDDLGSPAPSLTQDHKLPSSTPLSHGRLESIDGLS
SQQEQSPRLEIPPCEPRPFLIYNKVSAVINESKNMSTGVKEETRNDEIPAEPQTVKEPKT
RNPVWYEYGCV
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctcccaaatagacgaatttttggcaggccctcttgtcacatggttcgtcagc
tgcttggaagacccagactcgttaacgaattacaacgatttggtcgatggtgttctgttg
cacagtgtttttctacaaattgatccagagcctttgtacgacggtgtagtacccacaggt
ggaaatcataccttacgagccaaaaatttgaaaacgattgtgggcaacatcaaacaattt
tacgaagaagaattaggccacttgataatcaaacaaccggacacagaaaatttgggcaaa
gagcctgaatcgcacgttcaagatgctcgattattattacttttgttgctgggctgcgct
gttcagtgtccaaataagaagcaatttattacaaaaatcaaaacccttaatttggacact
caattggcgattgtcgactgtattaaacaagttacggatcaacctgatattgttattact
caggactccatggagaacgctaatttggcaggcctattcaaacaaatcaaacagttgcta
caagaacgtgatctctatcgagagaaatgtgctgtaattaacaatatgtctggaactaac
gattgtccggttgatcctgagagcgaagagggtgtaaagaaggctcaaagtactcaagca
aaattggaacgagaagaaaatcatcatttcgctgttgaattggctgactggaaatctaaa
gtcagaaaacagcgtcaagaattagaagaaaaaactgaagcacttctcgaatgcaaagag
gaactcgaacacaataaagcgtcactcgctaaactcaaacaagaaaatcaagaattaatg
catgaagcgcgtaccgcaaaatcctacagagacgaattggacgctgtgaatgaaagagcc
gagcgtgctgaccgtttggaaatggaagtggctcgatatcgtgaaaaactaacggacata
gaattttacaaaactcgtatcgaagagcttcgtgaagataatagagtattgatggaaaat
cgagaaatgttggaggaacaattgaactcatcgagacgacgtgctgacaaagttttagag
ctcgaggctcaaataattgagtacaaacagcttgtaaacgaaatggctttggaacgtacc
gcggagaaagaaaaataccaagaactttttgaagaaaattctcaactgcacagattgaaa
aaagcagcagctgaagaagcagctttagctggctcgattagcgaaactgaagaaccagac
acatccgacaacaggttatcggagcagctgacaaacaacgcacaaacccgagcactgaag
ctcgagttagagaatcgtcgattaaatacgttaatcgatactctaaaggaaaactcattt
cacgagacatcgtcacgagttcttgaactggaaaaagagaaaaagaaactttcactgaaa
atagaatctcttaatgatggaaacgaacgtctttgtcaacaaaactcggacttggaactc
gtctgcaggcaagctttggaggagaataaaaaattgcaggatactctaaaaaatcaacga
gcttctttcgaacgtcaacagcaagaatatcaaatccaacacaacaaaatattgcagtta
gaaaacaattatgatggcgttattaaagaaaaacaaagaattcagtcacttctcgaaagc
gttcaaagacgagccgacgaccttgatcgttcactcgaaatagcaaatcaaaaactcgaa
ggactaaaaaatgtggaaaacagtgccgagaaaactgaatctaaatgttccgagctcgaa
atgaaaattgcgatgttggaaaaagataaagagagcgcgttacgcgatatttacaaatat
cgcgaaacaatcgaggaaaaagacgtggcgcttgatacatcaaccaataatgtcgaagtg
ttggagagacgagtctctcaactcgagaacgaaagagacgtatacatcgagcaaataact
aggcttcaagagatcgaaagatcaagtaaagaattagactcccgagcagcaatcgatcgc
gaaactctcgagactctgcaatccaatcttgttgcagaaaaactaaacagtcaacgattg
tacactgtacttgaaaaatttggacttaatgccgaaatgctgctcactcttccatctgac
aatattttaaagagaatttctcaaattcctgaggttgtcgagtacattaaatcatcgatc
gtcacagagaccacttgcaattgtaacgaaaaaatgccggatgtgaaagtcgttgcttct
gcttacgatgcatcggttaacatgaatttacaagaaatcatcgaaactcaaaggagagaa
atagaaaacctttcaaaacgatcaaacacgagtcaagcaagagcagagcagctgaaatcg
gaaaaagctcaacttcaagtttcagtaacgacgctacagtcgcaaagtacatcccttacg
acccaacacacagctttgcaactggcgaattcgcagctagtagcagaaaaggaagagctt
ttgaaagatcgtattgctcagcaaagagctcactctcaactcgttaacgatcaagttacc
ctacaatctttgcacgagcagctgaacaacgagtatgaaaatctccttctcgagcgcgaa
accctcaaaggacaacttcgagatgtaaaaaatatgaacagagcgctcaacgaatcctgc
gaacgtttggaagcgaagaacaaagcattgatcgctgatcacgaaatcgccgtcactcac
gttaagagcctcaataatttaagaggagagcactcgaaattaaaagaggatttccgaaat
ctttacaccgctatggagaaactgaagatcgagtatcgaaatctccaggaggattaccgc
aaaaataaaatcgaaatgaatcgattgagcctaaaagaaacggagatgcagggcgaaatg
agcacgagggatgataaatgcgcgacaatggagctccaaataagcaaattgaatgaacgc
tgcgaaatgttgatgcaaatgaattctgggctagacagcaatagacggtcattgatggat
cacatcagtttgctttttagtcagtatcacgaattattgactcactcattggaggataaa
gaacattatcatatggaagaaaaattgtacacggacaaggtcaatcacttgtatagacag
aaggaaaaactcgaggaaaaaataatggagcattacagaaaactggaaagttgctcgacg
aagaacagaagattcggagcaaattttgtatcgcgaatccggaaagctggttccgagctt
ttgaagaatcgacgttcttgggccgatgattcgaagcaattggaaagcggaaaaatttat
gaaacggaatcgggttcaaatgattcggacgcaagtatcgacgatcatcgtgtaacaggc
ttagtggatcctgtcgtgttggaaggcgatgcactttcattgggtcatccgggaactcga
agaacagtttattacaccgacgatttggggtctccggcgccttctcttacacaggatcac
aaattgccttcgtcaacgcctttatcgcacggacgtctagagagtatagacggtctttcg
agtcagcaggagcagtcaccgcgattggaaattcctccttgcgagccccgtccattttta
atatacaacaaagtatcagcggttataaacgaatcgaagaatatgagcacgggagtaaaa
gaagagactcgaaacgatgaaattccagcagagcctcaaacggtaaaagagccaaaaacg
cggaatcccgtttggtacgagtacgggtgcgtatga
DBGET
integrated database retrieval system