Venturia canescens: 122412049
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Entry
122412049 CDS
T09386
Name
(RefSeq) syntaxin-5
KO
K08490
syntaxin 5
Organism
vcan
Venturia canescens
Pathway
vcan04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
122412049
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vcan04131
]
122412049
Membrane trafficking [BR:
vcan04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
122412049
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
Syntaxin
DUF16
DUF3560
DUF2207_C
SKA1
DUF724
TRPM_tetra
Tup_N
Motif
Other DBs
NCBI-GeneID:
122412049
NCBI-ProteinID:
XP_043277246
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All DBs
Position
6:1369158..1371636
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AA seq
371 aa
AA seq
DB search
MPARRRRGASEYDDDFVVTTSANLNSVNNLNTSNYYNERLNIAGGNNDINEDTKERDNSF
PVVMTSRDRSSEFASAIRRMQGRTVARATARGPRQARQIQSYSNFMMIAQNIGKNIASTY
TKLEKLAMLAKKKSIFNDRQVEIEELTNIIKTDLNSLNKQIAQLQELGRKQREGNSQGHH
IASHSSSVVVALQSKLANMSNHFKSVLEVRSENMREEQNRREQFTQGAVSRQLPPSVTSG
KQGSLLLLEQDSSSSVSIDLEGGMDQQLMMQRTVRDDTDAYVQSRAETMQNIESTIVELG
GIFQQLAHMVKEQEEMVERIDSNIEDTELNVEAAHTEILKYFQSVTNNRWLMIKVFGVLI
FFFVFFVVFLA
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcgcgtagaagacgtggtgcctcggagtacgatgatgacttcgttgtaacaact
tcggccaatttgaacagtgttaataaccttaacacttcgaattattataatgaaagatta
aacattgcgggtggtaataacgatattaacgaagatacgaaagaacgtgacaatagtttt
cctgtagtcatgacgtcacgcgatcgtagcagcgaatttgcaagtgcaataagaaggatg
cagggcaggacggttgctcgagcgacagctcgaggacctcgccaagcacgacaaatacaa
agctactctaatttcatgatgatagctcagaatattggcaaaaacattgccagcacatac
accaaattggaaaaattggcaatgctggctaagaaaaaatcaatattcaatgaccgacaa
gttgaaattgaagaactaacgaacatcataaagacagatctaaatagtctgaataagcaa
atagctcaattacaagaattaggaaggaagcagagagagggaaattctcaaggtcaccac
atagcttctcattcatcatcggtagtcgttgctctacaatccaaacttgccaatatgtca
aatcactttaagagtgtgttggaagttcgttccgagaatatgcgagaagaacagaacaga
agggaacaatttacacaaggtgctgtttcacgacaactgcctcctagtgtgacatctgga
aaacaaggttctttgcttctccttgagcaagattctagttcttctgttagcattgatttg
gagggtggaatggaccaacagttgatgatgcaacgtactgttcgagacgatactgacgcc
tatgttcaatcgagagcggaaactatgcaaaatatagaatcaacaatagtcgagctaggt
ggaatttttcagcaacttgcacacatggttaaagaacaggaagaaatggtcgagaggata
gatagcaacatagaagatacggaattgaacgtcgaggctgctcacacggaaattctgaaa
tacttccaatcagtgaccaacaaccgatggttgatgattaaagtgtttggcgtgctgata
tttttcttcgtatttttcgttgttttcttggcgtga
DBGET
integrated database retrieval system
