Venturia canescens: 122412162
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Entry
122412162 CDS
T09386
Name
(RefSeq) pre-mRNA-splicing factor 38
KO
K12849
pre-mRNA-splicing factor 38A
Organism
vcan
Venturia canescens
Pathway
vcan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122412162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vcan03041
]
122412162
Spliceosome [BR:
vcan03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
122412162
Complex C
U4/U6.U5 tri-SnRNP related factors
122412162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
122412162
NCBI-ProteinID:
XP_043277442
EnsemblRapid:
LOC122412162
LinkDB
All DBs
Position
6:complement(5599734..5601411)
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AA seq
311 aa
AA seq
DB search
MANRTVKDAKSIRGTNPQYLVEKIIRSRIYDSKYWKEECFALTAELLVDKAMELRFIGGV
FGGNVKPTPFLCLILKMLQIQPEKDIIVEFIKNEEFKYVRALGALYMRLTGTSLDCYKYL
EPLFNDNRKLRHQNKQGQYELIHMDEFIDNLLREERCCDVILPRIQKRHVLEENNELEAK
ISALEDDMDEGMESSEEEDLPPLKEETRKRPDDYTRDRERHRDRDKRHSRSDKKSDRDKP
RSRSRERDRRDRKRSKSPKGHSSSHKDKDREKDRYRRDDRDRERDRERERERERERDRDR
DRRRDRDRARH
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatcgtacagtgaaggatgcgaaatcaattcgtgggacaaatccacaatatctg
gtcgaaaaaataatcagatcccgtatttatgattctaaatactggaaagaagaatgtttt
gctctaacagcagaattgttggtcgacaaagcgatggagttacggttcatcgggggcgta
tttggaggaaatgtcaaacccacgccatttctctgcttaatattgaaaatgcttcaaatc
caaccggagaaagatatcattgttgaatttataaaaaatgaagaattcaaatacgttcgt
gcgcttggagcattgtacatgcgtctcactggcacttccctcgattgctataaatatttg
gagcctcttttcaacgacaatagaaaacttaggcatcaaaacaaacaaggacaatacgag
ctcattcacatggatgaattcattgacaatcttcttagagaagaacgatgctgtgacgtt
atccttccaaggatacagaaacgacatgttctcgaagaaaataacgagttagaggctaaa
atatcggcattggaagacgacatggacgagggaatggagagttcggaagaggaagatttg
cctccgttgaaagaagaaacgagaaaaaggccggacgattacacgagagatcgcgagcgt
cacagagatcgtgacaagagacattcgcggtccgacaaaaaatcggatcgggataagccg
agatctcggagcagagaacgcgatcgaagggatcgaaaacgtagcaagtcacccaaaggc
cattcgtcttcacacaaggacaaagacagagagaaggatcgttacagacgagacgaccgc
gatcgtgaaagagatcgcgagcgagaaagagaaagagaacgagagagggatcgtgatcga
gatcgaagaagagatcgcgatcgagctcgacattga
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