KEGG   Venturia canescens: 122412570
Entry
122412570         CDS       T09386                                 
Name
(RefSeq) DNA repair endonuclease XPF
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
vcan  Venturia canescens
Pathway
vcan03420  Nucleotide excision repair
vcan03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:vcan00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    122412570
   03460 Fanconi anemia pathway
    122412570
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vcan03032]
    122412570
   03400 DNA repair and recombination proteins [BR:vcan03400]
    122412570
DNA replication proteins [BR:vcan03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    122412570
DNA repair and recombination proteins [BR:vcan03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     122412570
SSDB
Motif
Pfam: ERCC4
Other DBs
NCBI-GeneID: 122412570
NCBI-ProteinID: XP_043278151
LinkDB
Position
6:complement(8980302..8984413)
AA seq 862 aa
MLEYENQMFLEALQEDGLMIVAKGLGLETVFANILKVYLDPGNLVLVLGTTDRDEEYFVN
QLSTMGVTTMPKIISAQITSNERELTYLDGGVLFISGRILVVDLLKKRVPLDLVTGILVY
RAQGILNSYQEAFALRLYRQANRTGFIKAFTNSALAFTVGFAQVERVMKALFVKNLYLWP
RYHSIVNNSLSKNKPEVIELHVKLTQKMLNVQTCLLDVMNVIVKELKSLNKYLDLDELNV
ENAISKKFHKQLQTQLDPIWHQLSGATKQLVADLKYMGALLTRLIYEDCVSFYVMLNQLR
SMDYAMKNTGWLVLDVVDDLFRHAKSRIYNVKDELKPEASPKWSALSEILAEIRTEMNKS
KELKENEKKILILVSDGNTCYQLKNYLVMGAGGFLLYEAMRKLKHTSIKKSSNQKETESK
SEPSPPVEEEIIENHESYVLTYSQKPVENVDENDKSFNAFEECSQVAGDDTTILETTEPV
VLIHSLKRSGDPMALQRTLSEVVPSYVVMYGADVSAIRQLEVYQNNNPSINLKIYFLVYG
GSVEEQGYLTSLRREKEAFEKLIKTKATMVIPSDQDGKSEALTHGPSIESEGNSRKGGLE
GSAENVANKVIVDIREFRSELPALLHKRGIEIEPVTIIVGDYILSPEICVERKSISDLIM
SLNSGRLYNQAVSMTRYYTKPMLLIEFDQNKSFCLQGNYYVSKDMKSSDITAKLQLLTMH
FPKLKLIWSPSPQATAQLFEELKQGRAQPDSQVAAQIGLDDDVDDKRVMVEKYNPNIQNL
VSKLPGVHSKNLRAILNKGVSLDGLVKMTKDELAAIISNKTDANALYAALHEKKKAEEAS
SSSTNRPVSKFRTRGLFTSKKS
NT seq 2589 nt   +upstreamnt  +downstreamnt
atgttggaatacgagaatcaaatgttcctggaggcccttcaagaggacggattgatgatt
gttgcaaaaggacttggcctcgaaactgttttcgcaaatatcctcaaagtctatttggat
cctggaaatttggtcctggttcttggcaccactgaccgggacgaggaatattttgtcaac
cagttatcaacaatgggtgtaactacaatgccaaaaatcatttccgcccaaattacgtcg
aacgaacgtgaactgacctacttggacggtggagttctattcatatccggacgaatccta
gtcgtcgatttgttgaaaaaacgtgttcctttggacctagtcaccggcatactcgtttat
cgtgctcagggcatcctaaattcttaccaagaggcatttgcacttcgtttgtataggcaa
gctaacaggactggtttcattaaagcttttacaaattcagcactggctttcaccgttgga
tttgctcaagtcgagcgagtcatgaaagctttgtttgttaagaatctctacctttggcca
cgttatcactccatcgtcaataacagtctgtcaaagaataagcctgaagttatcgagcta
cacgtgaaactgacgcaaaaaatgttgaacgttcaaacttgtttgttggatgtgatgaac
gtaattgtgaaggaattgaagagtcttaacaaatacctcgatctcgatgaattgaacgtc
gaaaatgctatttcgaagaaatttcacaagcaactgcagactcaactcgatcctatttgg
caccaactgagcggtgcgacgaaacagttggttgccgatctcaagtacatgggcgctttg
ttaacccgtttgatatacgaggattgcgtgtctttttacgtgatgctaaatcaattgagg
agcatggattatgcaatgaaaaacactggttggctcgttctcgacgtagttgacgatctt
ttccgtcacgcgaagagccgtatttacaacgtcaaagatgaattaaaaccagaagccagc
ccaaaatggtcggctctatcggaaatcctcgctgagattcggaccgaaatgaacaaatcg
aaagaactcaaggaaaacgaaaagaaaattctcattctcgtttccgatggaaacacgtgt
tatcagctgaaaaattatttagttatgggagccggcggatttttgctttacgaggctatg
agaaaattgaaacacacttcgattaaaaaatccagtaatcaaaaggaaactgaaagcaag
tccgaaccatcgcctccggtggaagaagaaattatagaaaatcacgaaagctacgtcctc
acgtattcgcaaaaaccggttgaaaatgttgacgaaaatgataagagcttcaacgctttt
gaagaatgttcgcaagtagcaggagacgatacaacgattctcgaaacaacggagccagtg
gttcttattcattcgctcaagagatcgggtgacccaatggcgcttcaaagaacactcagc
gaagtggtaccatcctatgtcgtaatgtacggcgccgacgtttcggcaataagacaattg
gaggtttatcaaaacaacaatccgtcgataaatttgaaaatatattttttggtttacggc
ggttcggttgaggagcaaggttatctgacgtcgttgcgacgagaaaaagaagcttttgaa
aagctgatcaaaacgaaggcgacgatggtgattccgagtgatcaagacggcaaatcggaa
gctctgacgcatggaccatccattgaaagtgaaggaaactctcggaaaggtggattggaa
gggagtgcggagaatgtggcgaacaaagttatcgtcgacattcgtgaattcaggagtgaa
ttgcccgctcttttgcacaaacgtggaatcgaaatcgaacctgttaccatcatcgtcggc
gattatattctatcaccggagatctgtgtcgaacgcaaaagtatctccgatcttataatg
tctctgaattcggggagattgtacaatcaggccgtctcgatgactcgatattataccaaa
ccgatgcttctcatcgaattcgatcaaaataaatcattctgcctccaaggcaattattac
gttagtaaagacatgaaaagctccgatatcacggctaaactgcaattgctcacaatgcac
tttccgaaattgaagctcatctggtctcccagcccccaagctactgctcaactcttcgag
gaattgaaacaaggcagagcccaaccagattctcaagtagcagctcaaattggcttggac
gacgatgtagatgacaaaagagtaatggtcgaaaaatacaatccaaacatacaaaatctc
gtttccaaacttccgggagtacattcgaaaaacttacgtgctattttgaacaaaggagtt
tcactcgatgggctcgtcaaaatgactaaggatgaattggcggcgataataagcaacaaa
accgatgcaaacgcgttatatgcggcgctccatgagaaaaagaaggcagaagaagcttcg
tcgtcgtcgacaaatcgaccggtctcgaaatttcgtacacgaggtttatttacctcgaaa
aaatcatag

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