Venturia canescens: 122412597
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Entry
122412597 CDS
T09386
Name
(RefSeq) focadhesin
KO
K27498
focadhesin
Organism
vcan
Venturia canescens
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcan03019
]
122412597
Messenger RNA biogenesis [BR:
vcan03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
122412597
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3730
Motif
Other DBs
NCBI-GeneID:
122412597
NCBI-ProteinID:
XP_043278207
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Position
6:13776392..13781066
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AA seq
1189 aa
AA seq
DB search
MDVIEYKLASNNPTLISHAIWKLLDAVKEKVENGESESKITELKFLLSQCESNNGIISIT
ACQALVTLAESRILPTATILSNLTVCLGKAKHCGMVASAICNLLTLDLKTLEPEGECPFT
LKTLQHPLITVLVQKKEAWKDLLMDVQAMLNHCEAKFLERYVTLLRPLFLYILCDPKLSL
SESCRQQAWHLLVLANGTIELQIEILQWLQTASLERCLDTNYRILELAEITNTYSNKSFS
SALVFSITSMALELLRKNGDPRSNLDMVSNILDRSDYNSGNVLMCLVAEMITICPSIYLL
DIVTIAAKILDKTRCNRTVAHVLISSILQWMAYPTVLCSEALDLARNLIKKIVRGEPKNY
TPSESESDNKFKGLYKVDANLQFYMELCCTVESLNRETILPWLEKLSKSPNYILPSYKLI
IAGVFLESNNQEIIKKTCRLLVELSKNGGQILPTILYKLSNTRDCEQTKTLLFALPRLTR
SKENVPIVMSTLKTLSAAGKPLNYVAIELYVQALTVEPRCHRHLQTALVQLSNTDTSWQS
DVTCARAMKYICENHSEHGAELVPLLSQILNRCSSKSGSAASALSLNGISALCVAGVIEI
CSTWRVLAPKMNEESRVIVVQAICELFGDIPLTPSQEGTEYGKLMTEVLTKLWDYALNSK
KLEIVESAFKALQSYKLSNMPLCVLPVDFINRVEKPETINSRKNEEEEDGDKTENLFPYI
PAHYWILLLENINRSSLPAASNFFQHFIGEELHSFRTGIYRWPHGEPGNFKYLSEKSPLR
AIGEYIRTYKSTHSENKKTVTIECMRIFSHKYLKALPPIEFSHFKPAIEISSKTREYGLS
LACHQAPISPSAKEYVEKHMTAFTKKCGTSSPEEFKECLNIYKKLDDVCRAVGSNVLGPF
LDTTLNNVLEKACRNNEYAIAMFDEIMDYFAKTLKDELIHNDNRSLITSNLEKMMDRIDV
DSRMFKSYTNAALQLTTEHLERMTLPSVWLQITPDKLRKAIIIRAELVLKRNDVTPLSWM
NEIIRASSSTRDVHSCLLEQLQRILPEIRLEKSNAAWTLNLMRRIGSILIESQEKEENLD
AAIFLCEILFISVVCLSATDCILLNDRSLVTSHLTRAKLFPQAVASIVQTAYWKDIIPQT
MEWLNHMRTTSIPRMYKIVFHNALVSLKNEVYFDVAWTKYLSIRAPINA
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atggacgttattgaatacaaattggcttcaaacaatccaaccctcatatcgcacgcaata
tggaaattgttggatgcagtaaaagagaaagtggaaaacggcgaaagcgaatcgaagatt
accgagttgaaatttcttttgagccaatgtgaaagtaacaacggaataataagtatcaca
gcatgtcaggctttagtaacactagcggaaagcagaattcttcctacggcaaccattctg
tcaaatttaacagtctgcctaggaaaagcaaaacattgtggtatggttgcttcagcaata
tgcaatctcttgactctagatttaaaaacacttgaaccagagggtgagtgtcctttcact
ctgaaaacactgcaacatccattgataacagttttagtacagaaaaaagaagcatggaaa
gacttgctgatggatgtgcaggcgatgctgaatcattgcgaagcaaaatttttggagcgc
tatgtgacacttctacgtccactatttctttatatcctgtgcgatcctaagctttcactt
tcagagagttgtagacaacaagcttggcatttgttagtactggcaaatgggacaattgaa
ctacaaattgaaattttgcagtggctccaaactgccagcttggaacgttgtctggatacg
aattaccggattctcgagcttgcggaaatcaccaacacttacagtaacaaatcgtttagt
tctgcactcgttttttctataacgtcaatggctctagaactgctacgaaaaaatggagat
cctcgctctaatctggatatggtttcaaatattcttgaccgcagcgattataattctggc
aatgttctgatgtgtttggtagccgaaatgattaccatctgtcccagtatttatctattg
gatatcgtaactattgccgctaaaatcctagataagacgcgttgcaatcgaacagttgct
cacgtcctaatatcatcgattctccaatggatggcatatcctacggtattgtgttcagag
gctctggaccttgcacggaatttgattaaaaaaattgtcagaggtgaaccaaaaaattat
acacccagcgaatctgaatcggataacaagtttaaaggcttgtacaaagttgatgcaaat
ctccaattttacatggaattgtgttgcaccgtggagtctttgaatcgagagacgattttg
ccatggctagaaaaactatcgaaatcgccaaattacatcttgcccagttacaaactaata
attgctggagtatttttagagagcaacaaccaggaaatcataaaaaaaacgtgtaggctc
cttgtggaattgtcaaaaaacggaggtcaaattttgcccacgattctttacaaactgtcg
aatactcgagattgtgaacagacgaaaacattgttattcgcgctgccaagattaacaaga
tcgaaggaaaatgtgccgatcgtaatgagtactttgaagacattatctgcagctggaaaa
cctttaaattatgttgcgatcgaactgtacgttcaagcgttgacagtggagccgcgatgc
catagacatcttcaaacagcgctcgtgcaattaagcaacaccgatacttcctggcaatcg
gacgtaacatgcgcaagagcaatgaaatacatttgtgaaaatcattccgagcacggagca
gaattagtgccacttttgtcacaaatattaaatcgatgttcctcgaaaagcgggagtgct
gcaagcgctttatctctcaatggcatttccgctctttgcgtcgctggagttatagaaatt
tgttctacgtggcgggttctcgcgccaaaaatgaacgaagaaagtcgtgtgattgttgta
caagcaatctgcgaacttttcggtgacataccactaaccccaagtcaagagggcaccgag
tatggaaaattgatgaccgaagttctcacgaaactttgggactatgctttaaactcgaag
aagcttgaaatcgttgaatcggcttttaaagctttgcaatcatacaaattgtccaatatg
cctttgtgcgtacttccggttgattttataaatcgtgtggaaaagccggaaacgataaac
agtcgaaaaaatgaggaggaagaagatggtgataaaacggagaatctctttccttatatt
ccggcccattattggatacttcttctggaaaatatcaatcgttcttcacttccagctgca
agtaatttttttcaacattttattggcgaggaattgcacagttttcgaactggaatttat
cgatggcctcatggtgaacccggcaatttcaagtatctttcggaaaaaagccctctgcga
gccatcggtgaatacatcagaacttacaagtccacgcacagcgagaataaaaaaactgtc
acgatcgaatgcatgagaatattttcccataaatacttgaaggccctccctccaatcgaa
ttttcgcatttcaaaccggccattgaaatatcttcaaaaacacgagagtacggactttct
ttggcttgtcatcaagcccctatttcaccatcggccaaggaatacgtggaaaaacatatg
actgcttttacgaaaaaatgtgggacttcgagtcctgaagagttcaaagagtgcttgaat
atttataagaaactggacgatgtttgtcgagcggtcggctcgaacgttctcggcccgttt
ttggatacgacacttaacaatgttctcgaaaaagcttgtcgcaacaatgaatacgcgatc
gctatgttcgacgaaataatggattattttgcaaaaactctcaaagatgaattaattcac
aatgacaacagatcgttgatcacgagtaatttggaaaagatgatggaccgcattgacgta
gattcgagaatgtttaaatcttacacaaacgcggctttgcaattgacaacggaacattta
gagagaatgactttgccaagcgtttggctccaaattactcctgataaattacgaaaagct
attatcattcgagctgaacttgttctgaagagaaatgacgtcactccattgagctggatg
aacgaaattatccgagcttcgtcttcaacacgggacgttcactcatgtcttcttgaacaa
ttacaaagaattttgccagagataagattggaaaaatcgaatgcagcctggactttgaat
ctgatgcgtcgaataggatccatacttatcgaaagccaggaaaaagaggaaaatctcgat
gcagctatatttttgtgtgaaattttattcatcagtgtcgtttgtttatcagcgacggac
tgtatactattaaatgatcgtagtctcgtgacgtcacacctgacaagagcgaaattattc
ccccaggctgtagccagcatagttcaaacggcgtattggaaagacataattccgcaaacc
atggaatggctgaatcacatgagaaccacttcaatacccagaatgtacaaaatcgtattt
cacaatgctctggtatcactgaaaaatgaagtttacttcgatgttgcatggacgaaatat
ttatctatcagagctccaataaacgcgtaa
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