Venturia canescens: 122412719
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Entry
122412719 CDS
T09386
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
vcan
Venturia canescens
Pathway
vcan03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122412719
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vcan03009
]
122412719
Ribosome biogenesis [BR:
vcan03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
122412719
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
WD40
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
eIF2A
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
122412719
NCBI-ProteinID:
XP_043278419
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Position
6:complement(12777896..12781481)
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AA seq
599 aa
AA seq
DB search
MNRNVKIARKDNGVINRTNNNRITRKRKLKHENEVKRKAKAKVSEEANKASSCDEGEIMV
AEDSSDENVLDKEETVNKSDEEADTTDFSEDDLKKRITDDEETEIQAAKTKTRKTKYNSA
EETRLEKLVFGDPGNVIKNLLVHDDSTKKSIAKRIEGPSISTDESDQDDVRFEMETDSED
DHHGMDKTAKTVAWVDDNDENYSIAAALKTQRRRLPKGRQEQTYTQLLENKLTQIVGSPK
WARLNTQVKNNDDDEDSDSEILRHSNHLTVPTTRKLRKGTIDIKVLTDINKSTHTEGPIV
TSVEFHPTSTVAMVAGLSGILSLFQIDGRENTKLQSIRFEKFPINCAKFLHQGSEVIVGS
RNCAYSHAYDLMSGKTHKIPLPHGVTNMQKFETSPDGKFIAVIGKRGVIHLLLSSTKELV
TNFKMNRRCLAIGFSPNSDKLITHGDGEEMYIWDLKSRSCIHKAVDDGCITSSAITFSPS
GQFLATGSKQGVVNVYETETVLREKYPKPLKIVLNLVTPITKLKFNPASEILSMASKCKE
NAFKMMHLPTFTVFSNFPTFQTKMFHPLDIDFSPGSGYLGLTNDKGYAYLYRLKHYNNY
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgaatagaaacgtgaaaatcgctcgtaaagataatggtgttatcaataggacgaataat
aatcgtataacaaggaaaagaaaattaaaacatgaaaatgaggttaaacgtaaagcaaag
gcaaaagtaagcgaagaggccaataaagcaagtagttgtgacgagggtgagataatggtt
gctgaagacagcagtgatgaaaatgttttggataaggaagagactgtaaataaaagtgat
gaagaagccgatacaaccgacttcagtgaggatgatttgaagaagaggataacagatgat
gaagaaactgaaattcaagctgccaaaacaaagacgagaaaaacaaaatacaattctgcc
gaagaaactcggttggaaaaactagtttttggagatcctggcaatgtcatcaaaaatttg
cttgtacatgatgactcgacaaaaaaaagtatcgcaaaaagaattgaaggcccaagtatt
tcaactgatgaatctgaccaagatgatgttcggtttgagatggagactgattcagaagat
gaccatcatggaatggataagactgctaagacagttgcatgggtagacgataatgacgaa
aattattcaatagcggctgctctgaagactcaacgacggagattgcccaaaggtcgacaa
gaacagacgtacacccaattgctggagaacaagttaacacaaatagttgggagtccaaaa
tgggctcgactgaatacccaagtaaaaaataacgacgatgatgaagattcggactctgaa
attttacggcacagcaatcatttaacagtcccaacaacaagaaaacttcgtaagggtaca
atcgatattaaagttttaacggatataaacaaatctacgcacactgagggtccgattgtt
acaagtgttgaattccatccgacatccactgtagctatggtagcagggttatctggaatt
ttatctctctttcaaattgacggtagagaaaacacgaaattgcaaagcattcgcttcgaa
aaattccctataaactgtgcaaaatttttgcatcaagggagcgaagtgattgtaggctca
cgcaactgtgcgtacagtcatgcttacgatctgatgagtggtaaaactcacaaaatacca
ctgccccatggtgttacaaatatgcagaaatttgagacgtctcctgatgggaaattcatc
gctgtgattgggaaaagaggtgtgattcatttattgttgagttcgacgaaagaactagtg
accaatttcaaaatgaacagaagatgccttgcaataggatttagcccaaacagcgataaa
ctcattactcatggagatggtgaagaaatgtacatatgggatttgaagagtcgaagctgt
attcacaaagcggtcgatgatgggtgtatcacgagttcagcgataacattttcacctagc
ggacaattcctggcaactgggagcaaacagggagtagtcaacgtttatgagaccgaaacc
gttctccgagaaaaatatccaaaaccattgaagattgttttgaatcttgtcacaccgata
actaaattgaagtttaatccagcctcagaaatattgtcgatggcttcaaaatgcaaagaa
aatgcatttaaaatgatgcacttaccaacatttactgttttctcaaattttccaacgttt
caaacgaaaatgtttcatcctctagacatcgatttttcacctggcagtggctaccttgga
ctgaccaacgataaaggttatgcttatttgtacaggttgaaacattataacaattattaa
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