Venturia canescens: 122412891
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Entry
122412891 CDS
T09386
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1-like isoform X1
KO
K05034
solute carrier family 6 (neurotransmitter transporter, GABA) member 1
Organism
vcan
Venturia canescens
Pathway
vcan04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
122412891
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcan02000
]
122412891
Transporters [BR:
vcan02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
122412891
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
122412891
NCBI-ProteinID:
XP_043278796
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Position
7:171332..178481
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AA seq
627 aa
AA seq
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MTETTRDPELAEAENIEEVRAALNLMCASPTPKQNELPERGSWSTKLDFILSVVGLAIGL
GNVWRFPYLCYKNGGGAFLIPYFLALILAGIPMFFMELALGQMLTIGGLGVFKIAPLFKG
IGYAAAVMSCWMNVYYIVILAWAIFYFFVSMRSGTFRLASSSPAALLPWGSCNNPWNTKT
CVNPYDRRSLQCWDQMTRNHNLVKMCSLNQLNVSASDLTDPVKEFWERRALQISDGIESV
GSIRWELAATLLVVWIMCYFCIWKGVKWTGKVVYFTSLFPYVLLTILLIRGITLPGAMEG
IRFYVSPNLSKLKESEVWIDAVTQIFFSYGLGLGTLVALGSYNKFSNNVYKDALIVCTVN
SSTSMFAGFVIFSVVGFMAHEQQKPVAEVAASGPGLAFLAYPSAVLQLPGAPMWSCLFFF
MLLLIGLDSQFCTMEGFITAMVDEWPHLLRRRKEIFIAIVCILSYLVGLSCVSEGGMYVF
QILDSYAVSGFCLLFLIFFECVSISWAFGVNRFYDGIRDMIGYYPIVWWKFCWCFTTPMI
CIGVFFFNLVQWTPVKYLEYEYPWWSHVFGWFTALSSMLCIPGYMIYIWITTPGDTTTKF
KLLVRIDEDVTRLRTKMGLPAVELSPL
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgacggaaacgacgagagatcccgagctcgccgaagctgagaatatcgaagaagtcaga
gctgcgttgaatttaatgtgcgcctcaccgacacccaaacaaaatgaacttcccgaaaga
ggatcgtggagcaccaaattggatttcattctgagtgtggtcggtttggccataggtctc
ggtaacgtttggagattcccgtatttgtgttacaaaaatggaggcggagcgtttctcatt
ccatatttcctcgcgcttatattggccggaatacccatgtttttcatggagcttgcgctt
ggacaaatgttgacgattggtggtctcggtgtattcaaaatagcaccgctcttcaagggt
atcggttacgcagcggccgtaatgtcctgctggatgaacgtctactatatcgttattctc
gcctgggctattttttatttcttcgtttccatgaggagtggtacgttccgattagcgagt
tcttccccagcagcacttttgccatggggtagctgcaacaatccgtggaatacaaaaact
tgtgtaaatccgtatgacaggagatctcttcagtgttgggatcaaatgacgcgtaatcac
aatctcgttaaaatgtgctcgttgaaccaactgaacgtatcggcatcggatcttacggat
cctgttaaagaattttgggaacgacgagctcttcaaattagcgacggtatcgagagcgtt
ggctcgatacgctgggagctcgcggctactttgctcgtagtttggataatgtgttacttc
tgcatctggaaaggtgtcaaatggaccggcaaagtcgtatactttacatcattatttccc
tatgtactcctgacgattcttctcattcgcggtattaccttaccaggagcgatggaagga
atacgattctacgtcagtccaaatttatccaagctcaaagagtccgaggtatggatcgac
gctgtgactcaaatattcttttcgtatggtctcggtcttgggaccctcgtcgcactcggt
agttacaacaaatttagtaacaacgtgtacaaggatgcccttatcgtttgcacggtgaat
tcgtcgacgagtatgtttgccggtttcgtaatattttccgtcgttggatttatggcccac
gagcaacagaaacccgtcgccgaagtcgccgcttccggtccgggtctcgccttcctcgct
tatccatcggctgtcctccaactacccggtgccccaatgtggtcctgtctcttcttcttc
atgctcctacttatcgggctcgactcgcaattttgcactatggaaggcttcataacggcc
atggtggacgagtggcctcatctactccggagacgcaaggaaatattcatcgcgatcgtg
tgcatcctctcgtatttggttggtttatcgtgcgtttccgaaggaggaatgtacgtcttc
caaatactagattcctacgcggtttccggtttttgtcttctcttcctcatattcttcgaa
tgcgtatcgataagctgggcatttggtgttaaccgattttacgatggcatacgcgacatg
atcggctattatcctatcgtctggtggaaattctgttggtgtttcacaactccgatgata
tgcattggcgtttttttcttcaatttggtccagtggacgccggtcaagtacttggagtac
gagtatccctggtggtcccacgtatttggctggttcacggcattatcctcgatgctttgc
atacccggctacatgatttatatctggattacgacacccggcgacacgactacgaaattc
aagttactcgtcagaatagatgaggacgtcacgaggttgcgaacaaaaatgggtctacca
gcggtcgaactttcgcctctttag
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