Venturia canescens: 122413810
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Entry
122413810 CDS
T09386
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
vcan
Venturia canescens
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vcan03041
]
122413810
Enzymes [BR:
vcan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122413810
Spliceosome [BR:
vcan03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
122413810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
SNF2-rel_dom
ERCC3_RAD25_C
Cas3-like_C_2
Chorion_2
GRDB
Motif
Other DBs
NCBI-GeneID:
122413810
NCBI-ProteinID:
XP_043280348
LinkDB
All DBs
Position
7:11831232..11838103
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AA seq
577 aa
AA seq
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MGRYRSRSRDRDRRRRSRTRSRSRSPRDRRGWASGPTRERSGMGSGRGGRNQPGANLRKP
RWDLNRLEPFKKDFYIPSDVVHNRDPRIIEQYRSDKEITLRGSSIPNPVFTFDEAGFPDY
VIKEIKRQGFKEPTPIQAQGWPIALSGRDMVGIASTGSGKTLSYILPAIVHINSQPKLSR
KDGPVALVLAPTRELAQQIQQVADDFGHSSGIRNTCLYGGAPKGAQARDLDGGVEIVIAT
PGRLLDFLESCRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPK
EVKNLAEDFLKDYTQINVGSLQLSANHNILQIIDVCQDYEKENKLSTLLKEIMAEQENKT
IVFIETKRRVEEITRKMKRDGWPAVCIHGDKTQQERDWVLQDFRSGKAPILVATDVAARG
LDVEDVKFVINFDYPSCSEDYVHRIGRTGRRQKTGTAYTFFTPNNSNKANDLIQVLKEAN
QVINPKLLELADSRNGGFGRHRGGGGRNKWRGRGGGMRTGRDRSYSRSRSRSGSRSMSRE
HNGRNNRRSYSRSYSRSRSPINNRTEVIGKSYWSSER
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgggacgatatagaagtcgtagtcgagatcgtgatagaagacggagatcacgaactcgc
tcgcgaagccgttctcccagggacagaagaggatgggcaagcggacctactcgtgagaga
agcggcatgggaagcggcagaggtggacgaaatcaacccggagcaaacttacgaaagcct
cgatgggacctgaatcgtctagagccttttaaaaaagatttttacattcctagcgacgta
gtgcacaaccgagatccaagaattattgaacaatacagaagcgataaggaaatcactttg
cgtggctcaagcatacccaaccctgtgtttacattcgatgaagctggatttccagattac
gttatcaaggaaataaagcgccagggattcaaagagccaacaccgatccaagctcaagga
tggccgatagctttaagtggccgcgatatggttgggattgcatcgacaggttcaggaaaa
acactgtcatacatattgccagcgatagttcatataaacagtcagccaaagctgtctcgc
aaggatggtccggtggcattggtgttagcaccgacaagagagctcgcacagcagattcaa
caggttgctgacgattttggtcattcatcagggataagaaatacttgtttgtacggtgga
gcgccaaaaggtgcccaagcgcgtgatttggacggaggtgtagaaatcgtcatagcgacg
cctggccgtttgctcgattttttggaatcttgtcgaacgaatctgaagcgttgcacatat
ctcgttctcgacgaagccgacagaatgttggacatgggctttgagccgcagatacggaaa
atcattgagcagattaggcccgatcgacaaactcttatgtggtcggcaacgtggccaaaa
gaagtgaaaaatctggctgaagattttctcaaggattacacgcaaataaacgtcggatcc
ttgcagctctcggccaatcacaatatcctgcagatcatcgacgtttgtcaggattatgaa
aaagagaacaaattgagtacgctcttgaaagaaataatggccgaacaagagaacaaaacg
atcgtttttatcgagacgaaacgaagagtcgaggaaatcacaagaaaaatgaagcgagat
gggtggccggcggtatgcattcacggcgataaaacacaacaggaaagagattgggtgttg
caagatttcagatcgggcaaagcgccaattctagtagcaactgacgtagcggcccgggga
cttgacgttgaggatgtcaagtttgttatcaactttgattacccgtcttgctccgaagac
tacgttcatcgcatcggccgcactggccgaagacagaagaccgggacagcttatacattc
ttcacaccgaataactccaataaagcgaacgacttgatacaagtattgaaggaagccaat
caagttatcaaccccaaattacttgaacttgccgacagcaggaatggaggcttcgggcga
cacaggggtggtggaggacgaaacaaatggcgtggacgaggaggcggcatgagaaccgga
agagaccgtagttattcgaggagccgaagtcgtagcggaagtcgaagcatgagtagagaa
cacaatggacgcaacaacaggcggagttacagtcgtagttactcccgaagtcgtagtccc
attaataatcgcacagaagtgatcggcaagagttattggagcagcgagagatga
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