Venturia canescens: 122413902
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Entry
122413902 CDS
T09386
Name
(RefSeq) CLIP-associating protein 1-A isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
vcan
Venturia canescens
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vcan03036
]
122413902
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
vcan04812
]
122413902
Chromosome and associated proteins [BR:
vcan03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
122413902
Cytoskeleton proteins [BR:
vcan04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
122413902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT_EF3_N
Vac14_Fab1_bd
HEAT
Cnd1
TOR1L1_N
HEAT_EZ
Adaptin_N
INTS7_N
HEAT_2
Tti2
Ipi1_N
ParcG
Arm
Motif
Other DBs
NCBI-GeneID:
122413902
NCBI-ProteinID:
XP_043280503
LinkDB
All DBs
Position
7:15531268..15558375
Genome browser
AA seq
1468 aa
AA seq
DB search
MALNPRDMDAFVALLSTSDIKKKLTVGNLLLNYLGDPTKSIECQDIGLFIDQIIPWLANG
NAKVVQNGLEVLTYLADRMGHDFRPYISTIIQPTIDRLGDSKDLTREKARLVLLKVMEKG
SMMPQQLLDRLHPAFGHKNAKLREEALVLLTTTLNEHGADEMLLSGVIPSIVKLLSDPNE
KVRETAVNTAVTIYTHVGERFRMDLQRKHNVPQAKWALLAEKFDQVKTDGDFLPLALSSD
VGKDNDEPDRAIKSAPVKRTTSVPLKRSQFGPAKAPLSTPGQAGAVDEETFLTAFEDVPS
VKLFSAKDLEEQMKVISETIGDDKKDWKQRTDSLKRLRGIIVAGGTNYENFTELLKSIQR
PFAGACTDLRSQVVREACITLAFLSHHLKNKLAGFVEAILVSIMNLIQNSAKVVATAGAV
ALRFIFQNTHSGRFIPIIAASLSNKSKDIRRASCEYLNLILQSWPTLILQKHVTVLQDAI
KKGVADSDSEARAFARKSYWAFKDHFPEQAEVLLNSLDATYKRSLMSLSNSGSINSLNTV
PRSMNTSPRASRPGLSSTETVVNTGSTENLQANESPPHGLLRRTPSLPRSYRQSGIPILQ
RQSTDNYCRVTPGPRSTSAIDLQAAKRAQARTVYANLNRMRATPHNDHGGEGATRQARFN
RSPDMAAAAANTERTPRTRTKVAGVSQSQPNSRSGSPSSRSSYATYNRDNENSAIRPRRL
SGQGIRSGSNSREPSPQRFAMDRSFASKIRGRNMYMSPSERPPTSRPVMAQKMLQQSREA
ESALADALTGKGDHSDDSETNSICSEHSFDGIRRASDSYSWSGSQQRLYRDHWDQSIVKD
IKEIIENCGRNPWTNRKEGLIGLHNFLSNGNTLSASELRKVTDIFAKMFMDSHTKVFSLF
LDTLTVLITTHREDLNDWLYVLCARLLNKLGTDLLGSVQTKVYKTLDVVRESFPGDLLLP
AVMRFLTDPTQTPNSRVKVATLNFLMHVAGNSQPSALNPTCKSALARLLNWTMDVKSQDV
RRHAEEAVIALYNLNPPQFPMILGELPKFYQDAAMPLIQAHLKRSSSSSNPSSPGMETGR
LLHSPARTRTKTDVDMTDADNLNPEEVYKSLRRTTAEIQNYGFERTTTSKDSGISNMADV
EEKMESLTLTNSGRSSSVSSPTQRGKPVNNNGSSDTIAGDLILPQQQENNGYGTHSSSPD
MLLRGPEVVDNTIKTLQSAISQNSAKVQALEEFQLYVRDCDAAYIKQQFKKLLKTLLECL
ASEDKQLEIQVLQTLIEMLKCPELVESFSKYAELVVLKVLHAHKIDEPPEKPCDATSSSA
VAVTSPDRPAKQWHGLKVAEKCAAMIARVLPVDQIIRLASTSITTEPFPKNVGAIKMLHE
AVEHRGREAIEPYLSEIMPGLITAYDDHESKVRKSAVFCMVAIHNAVGQEVMKPHLVPLY
GSKLKLLNIYIQRAQQTASQPASPRGKN
NT seq
4407 nt
NT seq
+upstream
nt +downstream
nt
atggcattgaatcctcgagatatggacgcctttgtcgcgctactctccacttctgacatc
aagaaaaaactgactgttggaaatttattgctcaattatctcggggatcctaccaagagt
atagagtgccaggatatcggtttgttcatcgaccaaattattccttggctcgccaatgga
aatgccaaggtagtgcaaaatggcctcgaagttctcacgtacctcgcggaccgaatgggc
cacgatttcaggccttacatttccaccattattcaaccgacgatagacaggctaggtgac
agcaaagatctgactcgagagaaagctcgcctcgtattactaaaagttatggaaaagggt
agcatgatgcctcagcaattgctcgatcgcctccatccagcgttcggccacaagaatgca
aaacttcgagaagaagctctcgtgctgctcacaacgacccttaacgaacacggagcagac
gagatgctactttcaggcgtgataccgagtatcgtcaaactgctctcggacccgaacgaa
aaggttcgcgagaccgctgtcaacacagccgtgacaatctacacccacgtgggcgagcga
ttccgcatggatcttcagagaaagcacaacgtaccacaagcaaaatgggctctgctggca
gaaaaattcgatcaagtaaaaacggacggagactttttaccactggcattgtcttccgat
gttggtaaagataacgacgagccagatagagcgatcaagtccgcgccggtcaagagaacg
acgagcgttccactcaagagaagtcagtttggtcctgcaaaagcccctttgagtactcca
ggccaagccggtgccgtggacgaggagacctttttgaccgcgttcgaagatgttccgtct
gttaaattattctcggccaaggatctcgaggagcaaatgaaggtgataagcgagaccata
ggcgacgacaaaaaagactggaaacaaagaaccgacagcttgaaaaggctacgaggcata
atagtcgcgggtggtacaaattacgaaaactttacggaattgttgaaaagtatccagcgg
ccatttgcgggcgcctgcacagatctgaggtctcaagtagtcagggaggcgtgcataacc
ctggcctttctaagtcatcatttgaagaacaaactcgccggcttcgttgaggccattcta
gtctcgataatgaacctcatacaaaatagtgccaaggtggtcgcaacggcgggtgcggtg
gcgctacgcttcatatttcaaaatacccacagcggacggttcattccgattatagcagct
tctctgagcaacaagagtaaagatatacgtcgcgcctcttgcgagtatctcaacctcata
ctgcaatcgtggcccactttaattcttcagaaacatgtgacagtacttcaggatgcgata
aaaaaaggcgtcgctgattctgactcggaagctcgtgcattcgcccggaaatcttactgg
gctttcaaagatcattttccggaacaagcagaggttcttttgaacagtcttgacgctacc
tacaaaagatccctcatgtctttgagtaacagcgggagtataaacagcctaaatacagta
ccaaggtcaatgaacacgagtcctcgtgcctcgaggccggggctttcttcaacagaaact
gtcgtgaacacgggcagcacggaaaatttgcaagcgaatgagagcccgccccacgggctc
ctcaggcggacaccgtctctgccacgctcctatcgtcagtccggaataccaattcttcag
cgacagtccactgacaattactgtcgagtcacgcccggcccgagatcgacgagcgcgatc
gatcttcaagcagcgaaacgagcccaggctagaacggtttatgccaatttgaaccgcatg
cgagccactccgcataacgatcatggaggtgaaggtgctacgagacaagctcgcttcaac
agatcaccggacatggccgcagcagccgcgaacaccgaaagaacaccgaggactcgcaca
aaagttgccggtgtttctcaatctcaaccgaacagcagatcaggttcaccgtcgtcgaga
tcgagttacgcgacgtataatcgcgataacgaaaattcagcgattagaccacgtcgtctc
tccggacagggaattcgtagcggaagcaatagtcgcgaacccagtcctcaaagatttgcc
atggatcggagcttcgcttcgaaaataagaggacgaaatatgtatatgtcaccgagtgaa
agaccaccgacttcaaggccggtgatggctcagaaaatgctgcaacagtcgcgcgaggcg
gaatctgctctggctgatgcgctcaccggtaaaggtgaccacagcgatgacagcgaaacc
aacagtatctgctcggagcacagcttcgacggtatcagacgtgccagtgattcgtattcg
tggagcggctcgcaacagagactttatcgcgaccattgggatcaatcgattgttaaggac
atcaaggaaataatcgagaattgtggtcgtaacccatggaccaatcgaaaagaaggtctc
atagggcttcacaactttctctctaatggaaatacgctatcagcctcggagctccgcaaa
gtcaccgacatatttgctaaaatgtttatggattcgcacaccaaagtgtttagccttttc
cttgatacactaacggtattgataacgacacatcgagaggatttaaatgattggctttat
gtgctttgtgcgaggctcctcaacaaattgggcaccgatcttcttggctctgtacagact
aaagtttacaaaactcttgatgttgttagagagtcctttcccggtgatctgttgttaccc
gcagtcatgagatttcttacggatcctacgcaaacgcccaattctcgggtcaaagtagca
acgttgaattttttgatgcacgttgccggtaattcgcaaccttctgctctcaacccaact
tgtaaatcagctctcgcgcgattacttaattggacaatggacgttaagagccaggacgta
aggagacacgccgaagaagccgtaatcgcactttataatctcaacccgcctcaattccca
atgattctcggtgaattgccgaaattctatcaggacgcagctatgcctctcattcaggca
catttgaaaagatcatcgagttcgagcaatccgtcgtcaccgggtatggaaaccggacgt
ttgttgcattcaccagctcgcacgagaacgaaaacagacgtcgatatgacagatgccgac
aatctcaatcccgaggaagtctacaagtctttgagacgcacgacagccgaaatacaaaat
tatggtttcgaaagaaccacaaccagtaaagatagcggtataagcaacatggctgatgtc
gaagagaaaatggagagtctcactctaacaaattccggccgttcttcgtccgtgtcttcg
cctacgcagcgtggtaagcctgttaacaataatggctcgagtgacacaatagctggcgat
ttgatattgccgcaacagcaggaaaataacggttacggaacacatagttcttctccggac
atgctactccgaggtccggaagttgttgataacacgatcaagacgctccagtccgcgatt
agtcagaattctgcgaaagttcaagcccttgaagaatttcaactgtacgtacgcgactgt
gacgcggcctacataaaacagcagttcaaaaaattactaaagacccttctcgagtgtcta
gcgtcagaggataaacagcttgagattcaggtgcttcagacgctgatcgagatgcttaag
tgtccagagcttgttgagtcgttcagcaagtacgcggaattggtggtattgaaggttttg
catgctcacaaaatcgacgagccgccagaaaaaccatgcgacgcgacgagttccagcgca
gttgctgttaccagtcctgacagacctgccaaacagtggcacgggcttaaagtagctgaa
aaatgtgcggcaatgattgcgagggtactgccggtcgatcaaataatacgcctagcttca
acctcgattacgacagaaccttttcccaaaaatgttggggccatcaaaatgttgcacgag
gctgtcgaacatcgaggtcgtgaggcaatcgaaccatacttatcggaaatcatgcccggt
ctgatcacggcttacgatgaccacgagagtaaagtacgaaagagcgctgtgttttgcatg
gtagcaatacacaacgcggttggccaagaagtaatgaagccgcatttggttccactgtat
ggaagtaagctcaagctgttgaacatttatatacaaagagcacagcagacggcgagtcag
ccagcgagtcctcgtggcaagaactaa
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integrated database retrieval system
