Venturia canescens: 122413930 Help Entry 122413930         CDS       T09386                                  Name (RefSeq) 5'-3' exoribonuclease 1   KO K12618   5'-3' exoribonuclease 1 [EC:3.1.13.-] Organism vcan  Venturia canescens Pathway vcan03008   Ribosome biogenesis in eukaryotes vcan03018   RNA degradation Brite KEGG Orthology (KO) [BR:vcan00001]  09120 Genetic Information Processing   09122 Translation    03008 Ribosome biogenesis in eukaryotes     122413930   09123 Folding, sorting and degradation    03018 RNA degradation     122413930  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:vcan03019]     122413930    03009 Ribosome biogenesis [BR:vcan03009]     122413930    03016 Transfer RNA biogenesis [BR:vcan03016]     122413930    03036 Chromosome and associated proteins [BR:vcan03036]     122413930 Messenger RNA biogenesis [BR:vcan03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Common to processing body (P body) and stress granule      122413930   mRNA degradation factors    5'-3' decay     5' exonucleases      122413930 Ribosome biogenesis [BR:vcan03009]  Eukaryotic type   Pre-60S particles    RNases     122413930 Transfer RNA biogenesis [BR:vcan03016]  Eukaryotic type   tRNA degradation factors    Rapid tRNA decay (RTD) pathway factors     122413930 Chromosome and associated proteins [BR:vcan03036]  Eukaryotic type   Gene silencing    piRNA pathway     122413930 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  XRN_N XRN_M XRN1_D2_D3 XRN1_D1 SH3_12 Motif Other DBs NCBI-GeneID:  122413930 NCBI-ProteinID:  XP_043280589 EnsemblRapid:  LOC122413930 LinkDB All DBs Position 1:7415446..7424082 Genome browser AA seq 1691 aa AA seqDB search MGVPKFCRYICERYPCLLELLNEYQIPEFDNLYLDMNGIIHTCSHPNDMDAHFRITEENI FKNIFQYIEILFNTIKPQKLFFMAVDGVAPRAKINQQRGRRFRAAKEAEAVEARARAKGE EIPKEARFDSNCITPGTLFMARLTEQLKYFVTWKISTSKLWQKCKVILSGPEVPGEGEHK IMDYIRYMKSQPDYDPNTRHCLYGLDADLIMLSLCTHEPHFAVLREEVKYGKVKKSTSPE KTRFCLLHITLLREYMEHEFAPVKDKLEFPFDIEKIIDDWILMGFLVGNDFIPNLPNLHI ETGALTILYKAYMEVLPSLDGYINEAGTLNLERFEKFMERLSQVDTDQFMEHLADLKYFE AHTGRRPNENERTSYRKPKDSPENLASPKKSANRELSALIQSTNDMLIGHSDEEDSSALD SDSETYNEEFSQHKRDYYMNKLEYENVDAEVLRSQAVAYVTAIQWNLNYYYNGCCSWSWF YPHHYAPYISDIKGFQDFKIEFELAKPFLPFQQLLAVLPAASRKLLPEAYQGLLTEEQSP IIDYYPLDFKTDLNHKKQEWEAVVLIPFIDEKSLLDAMEPYNAKLTPEEQKRNKHGPMSI ITYTDEDLGLYEAPQYFPTIHSHAKVVTLNREAIDVPVDKLVKGLCKGVKLSTYFAGFPT FQHIKHTAAFEMAKVKVFEQPSRRENMIISVVPSEIPNLHDAAGKILGKTVFVGWPQMKE ALVVGVSTNDRKITLINTQRGYSPENVRIEDLNAGLSAQWSAQCRSVYDGYKGRFGIDVG DIGVLVYALPMCGRQYILTAQGRMSLEKTWSTHPTPYAHQAIVTDIAVHDPGYVHNLNIT DVFTVKSIVFMLGHPHYGAMGEVIEPGLNAKTGRIKVAMRIENEPNFESIQRQFGDSEAQ WMSTGIAAQRLGVSNHFLSRITGSIYVTQGSAEAPENGKQNVGLNLKFTKRNEELPGYTK KSSGQWLYSTKSIGLIRSYMHQYPLLFERLAKRVTNDIYMENDLFESGPEKLSEVVEWLK EQPFACVDTRSCNSIGLDGDTIAKLQKELESMKNSENQDAGKTVLMQVKPHLLYKPGLHS GNLPPDPKAHHKLFDRIISVKDSSTVPLGYKGTIVCIQKAEDASDTVYDILFDKEFVGGV SFSGGAVNRRHKLHEADFINISHGARGELDIASITSGIPKQTPVPPKSWRQDSTNSKKQT LQNFPNSSARNPRQIPFPNFNQNKKVSNTEPQQIRVMKKNDATVNRPTQANCEAQKGTKQ PQNSGKVQAPTSTIDSGDIKNTIFPQKQPAQPPRPDQTSEFQMLWNELYKSSLPPSGVLT QKPIMPSVMSQPKPVSMPPSANDSLQDESAFLKAMLKISDENSSSSSKSSVSIASKPVVA QESSNTSRAPPLVQQLFDHARQASRKEPLSYTAKLLEYSQLSGRGMPRFNYHTNQQNMIC AQIVMPDMRTYCGEFFRASSEAAENAAEIVCKDLHLDKASKPGLSILGAPPPMWLNPLQN DLSQTPHNARPPPMMPPRSPQVFPNMHNPPMHMQQWNPRMPRAPAFPQVPHPNINQNRPP PAQNSTQAMPNPAEIARNVNKPESKNKKNTPFVPLQAQKKSTNPKPKQTSRNSNQTAKET KHQSHETQPRKIQDDASKQSKEDKSDNERKDTDTKKSPQTPQKVQRAPKPRRSRIAANFN TAPAPNGNAPQ NT seq 5076 nt NT seq  +upstreamnt  +downstreamnt atgggagtaccaaagttttgtagatatatctgtgagagatacccttgtctgctcgaatta ctgaatgaatatcagatccctgaattcgacaatctatatttggacatgaatggtataata cacacatgttcgcatcccaatgacatggacgctcactttcgtataacggaggaaaatatt ttcaagaatattttccagtacatagaaatattgttcaatacaataaaaccacaaaaatta ttcttcatggctgttgacggagttgccccaagagctaaaattaatcagcagcggggccgt agattcagagctgccaaagaggctgaagcagtcgaagccagagccagagccaaaggtgaa gaaattccaaaagaagcaagattcgactcgaactgcatcacacctggaactttgttcatg gccagactgacagaacaattgaaatattttgtaacatggaaaatatcgacgagcaaactt tggcagaaatgtaaagttatactaagtggaccggaggtacccggtgaaggagaacacaaa ataatggattatataagatacatgaagtctcaaccggactacgatccgaacacgagacat tgtttgtacggactggacgcagatctcataatgttgagtttgtgtacacacgagcctcac tttgccgttttgcgcgaggaggtcaaatacgggaaagtgaaaaaaagtacatcaccggaa aaaacgaggttttgtttattgcacataactcttttaagagagtacatggagcacgaattt gctcctgtcaaagacaaactagaatttcccttcgacattgaaaaaataatagacgattgg atattgatgggatttttagtcggcaatgacttcatacccaatttaccaaatcttcacatc gaaactggtgcgcttacaatattgtataaggcatacatggaagttttgccctcgttggac ggatacataaatgaagccggtaccctgaatttggaaaggtttgaaaaattcatggaaaga ttgtcgcaggttgataccgaccagtttatggagcatttagccgacttgaaatatttcgaa gctcacaccggcagacgaccgaatgagaatgagagaacaagttatagaaaacctaaagat tcgccagaaaatttagcctccccaaaaaaatcagcgaacagagaattgagtgctctcatt caatcgaccaacgacatgttgataggccattcggacgaagaagattcttccgctttggat tctgacagtgaaacttacaacgaagaattttcacaacataaacgagattattacatgaac aaactcgaatacgagaacgtcgatgcagaggtcttacgatcccaggcggtggcatacgtg acagcgattcagtggaacctgaactattactacaacggttgctgcagttggtcttggttt tatccgcatcattacgcaccctacatttcggacataaaaggtttccaagatttcaagatc gagttcgaattggcaaagccatttttaccgtttcaacaattgttggccgtcttaccagcg gccagcaggaagttgttacccgaagcgtatcaaggattgttgacggaagaacagtctcca attatcgactattatccgttggatttcaagactgatttgaatcacaagaaacaagagtgg gaagcagtagttctcattccatttatcgatgaaaaaagtttgttagatgctatggaacca tacaatgcaaaactcacgccggaagaacaaaagcgaaacaaacatggcccaatgtcaatc atcacgtacactgacgaagatctcggcctttacgaagctccacagtattttccaactatt catagccacgccaaagttgttacacttaatcgcgaggccatcgacgtgccagtagacaaa ctggttaaaggattatgcaaaggagttaaacttagcacatattttgctggttttccaact tttcagcatatcaagcataccgcagcattcgaaatggcaaaggtcaaagttttcgaacaa ccgtcgagacgtgaaaacatgataatatcggtagtaccgagtgagataccaaatttgcat gacgcggcaggaaaaatattgggcaaaaccgtttttgtggggtggccgcaaatgaaagaa gctctcgtcgtcggagtgtcaacgaacgatcgtaaaatcactttgatcaatacgcagcga ggctacagtccagaaaatgtccgtatcgaagacttgaacgccgggctttccgcacaatgg tcagcacagtgtcgttccgtttacgatggctacaagggtcgtttcgggatcgacgtcgga gacatcggcgtgttggtgtatgcgttaccaatgtgtggtaggcaatacatattaacggct cagggaagaatgtctttggaaaaaacgtggtcgacgcatccgacgccgtacgctcaccaa gcgattgtgacggacatagcagttcacgatcccggttacgtgcacaatttgaacatcacg gacgtattcaccgtaaaaagtatcgtattcatgcttgggcatcctcactacggagcaatg ggagaagtgatagagccgggtctcaacgcaaaaacgggacgaataaaagttgcgatgaga atcgagaatgagccgaatttcgagtcgattcaaagacaattcggcgactctgaggcacag tggatgtccacgggaatagcagctcaacgactaggagtgagcaatcattttcttagtcgt ataactggctcgatttacgtgactcagggctcggccgaagcaccagaaaatggcaaacaa aacgttggtctcaacctcaaatttactaagagaaacgaggagttgcccgggtacacgaaa aagtcatcgggtcaatggttgtacagcactaaatcgattggtctcatacgcagctatatg catcaatatccattgctcttcgagcgtttggcgaagagggtgacgaacgatatttacatg gagaatgatctttttgaatctggacctgaaaaacttagcgaagttgtcgaatggctcaag gagcagccgttcgcatgtgtcgacacccgctcctgcaactcgatcggtctcgacggagac acgatcgcaaagttgcaaaaagagcttgaaagcatgaaaaattcggagaatcaagatgct gggaaaaccgtactgatgcaggtgaaacctcacttgttgtacaagcccggtttgcactcg ggaaatttacccccagacccaaaagcacatcacaaattgttcgacagaataatcagcgtt aaggacagctccactgttccacttggctacaaaggaaccatcgtttgcatacaaaaggct gaggacgcttcggacacggtgtacgatatacttttcgacaaagagttcgtcgggggtgtt tccttcagcggcggagcggtgaatcgtcgccacaagcttcacgaagctgacttcataaac ataagccacggtgcaagaggcgagttggatatcgcgtcgataacatcaggaatcccaaag caaacgccggtaccaccaaagtcttggaggcaagattcgacaaattcgaagaaacagaca ctacagaattttccaaactcgagtgctcggaatccccgtcaaattccatttcctaatttt aatcaaaacaagaaagtttcaaacacggaaccccagcaaatacgagtcatgaaaaagaac gacgcgacggtgaatcgtccgacccaggctaattgcgaggcccagaagggaacgaagcaa ccgcaaaattcaggaaaagtacaagctcccacgagtactatcgattccggggatattaaa aatactatatttccacaaaaacaaccagcacaaccaccgaggcccgatcagacctccgaa ttccagatgttatggaacgaattgtacaaatcatctttaccgccgtccggggttttgaca caaaagccaatcatgccttcagtcatgtcccaaccaaaacctgtttctatgccaccatcc gcgaacgattcgcttcaagatgagagtgcatttttgaaagcgatgctcaaaatatcggac gaaaattctagctcgtcctcaaaatcgagtgtgtcgatagccagcaaacccgtcgtcgct caggaatcttccaacacctccagggcaccgccactcgttcaacagttgttcgaccacgct cgacaagccagccgcaaagagccgctttcgtacactgccaagttgttggaatattcgcaa ttgagtggtcgtggaatgcccaggttcaattaccacaccaatcagcagaacatgatttgt gcacaaatcgtcatgcccgacatgagaacttattgtggtgaattcttcagagccagttca gaagctgctgagaatgctgccgaaatcgtctgcaaggacttgcacttggacaaagcttca aaaccgggactgagcatactgggtgctccgccaccgatgtggttgaatcctctacaaaac gacctttctcaaacaccacacaatgcgaggccaccgccgatgatgccaccacgttcgcca caagtttttccaaacatgcacaacccacctatgcacatgcagcagtggaatcctcgtatg ccacgagccccggcattccctcaggttccacacccgaacatcaatcaaaatagaccacca ccggcgcagaactcgacgcaagcaatgccaaatcctgcggaaatagcgcgcaacgtcaac aaaccggaaagtaaaaataaaaagaatacacctttcgtgccacttcaagcacaaaaaaaa tcgacgaatccaaaacccaagcaaacctcgagaaactctaatcaaacggctaaagaaacg aagcaccaatctcacgaaacacaaccgagaaaaatccaagacgatgcgtctaagcaatcg aaagaagataaaagtgataacgagaggaaagatacggatacaaagaaatctcctcaaaca ccacaaaaagtgcagagggctccgaaaccgaggagatcgcgaatcgctgccaactttaat acagcaccagcgcctaatggaaacgcgccacaataa

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