Venturia canescens: 122413956
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Entry
122413956 CDS
T09386
Name
(RefSeq) PH-interacting protein
KO
K11798
bromodomain and WD repeat domain containing protein 1/3
Organism
vcan
Venturia canescens
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vcan04121
]
122413956
Ubiquitin system [BR:
vcan04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
122413956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Bromodomain
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF12
Beta-prop_SCAP
Beta-prop_SPT8
Auxin_resp
Itfg2
WD40_like
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
122413956
NCBI-ProteinID:
XP_043280591
LinkDB
All DBs
Position
7:complement(8540441..8550831)
Genome browser
AA seq
1786 aa
AA seq
DB search
MEAGTSRTEIATEPELYFLIAKFLEAGPCREVSNALKRELERAKILPQRIDWEGNSHNQT
FEELEKKYPHIGPSHLLQICARIGPVLEKEVPPCVPGAISLLGAGRQSMLRTKEDFLQQI
GGIVAYSGRFGGKPYLDPPLHSTIHNVVRAIQGRENSGPLSRRQIVPTKFYSKLQMYRHT
LGHLSAVYCVLYDRTGRYVITGADDLLVKVWSVLDGRLLATFRGASAEIMDITVNFDNTL
LAAGSLDRILRVWCFQTMSPVAVLSGHSGMITSVNFCPILCNGINYLVSTSTDGSVAFWP
HTKKYNERAVFQTKPIQYHEKMRPGQAQMICASFSPGGAFMAAGSADHHVRVYAMLGDEG
PRRVLEVEAHSDTVDSIQWAHGGLKFISGSKDGTANVWHFEQQQWMHKRLAMTTKLPGEP
ESDDESSKKTKVTMVSWDVSDEWVITAVSDSSLKVWNARTGELTKVLRGHKDEVFVLESH
PIDPRVILSAGHDGQLIIWDVLNTEPIVSFQNFIEGQGKGAVFDAKWSPDGTMLAATDSH
GHLLMYGFGSGPEKLKIVPKELFFHTDYRPLIRDTNNYVLDEQTQTAPHLMPPPFLVDVD
GNPYPPALQRLVPGRENCRGEQLVPNIAVGASGMQEVIEGLPMHEPRSNIDRLIEALAQR
QNIHGQDGEPIDERDENGEPQVRQIASPRGHRPGLRRAGDVEGIRQTSGNWQRDNTTPWN
KPILARPVHPAIRKTQSRLLNATAEMELENWRREMKRRPQAAATTLATQGNIGTRAANRK
RNRGIRHGYRTRAARGEEQDDDDIDNIDEGGSGSSVSNNSNDSSAEELSSDTTTSESSSE
YSDWIADHGLNLEPPKRSKRKRVNKVSSPPSGDADRKRNEPRKKKLPVAPAEVTDVPDIF
RPSEWLTEAVPHKTPYYPQMGDEVVYFRQGHQAYIDAIRRKKVYDLGPRSEPWAKINLRA
HEFVKVVGIKYEIRPPRLCCLKLALMDEDGHLTGQNFTIKYHDMQDVVDFLVLRQTFDTA
LGRNWSEGDRFRCIIDDSWWMGTIETIGPYDEAFPESYFLCFGVRWDNGEDEKVSAWDLE
AVDYDRLPSVVGGAVPVLPEELQTILYQPQPEEWPMGDREAACRRISRGLDQVMGLAIAE
PFTAPVDLNLYPIYSYIVEYPMDLSTIKARLENHFYRRITSAQFDVRYLATNAEQFNEPH
SQIVKRARIITDLCLKIIKENVELDIPAVYHQLVDTYHSSDSEIDVESTRERPSTSRQRP
TTSRNLRSQEVSKDWRIACRQLLETLWQCEDSIPFREPVDRLENPDYHHIVDTPMDLRTV
KEDLIGGNYESPLEFAKDMKLIFTNSRNYNTNKRSQIYLMTIRLSAMFEEHMRKIISTWK
TARRRSENAKAKAKANQRKKVKTRLTNGAGPSRAKSEDSSDDDDDNVNGENDDEEPEEPE
RNEIEPTRQRRRPQNPDAPGPSTSRMTNGHSKSAGNSSRQLRNSRVTASKKVKNSESEAS
ESEMSMESDSSFEETRRRTRTRKPVSSVADSDSGDSYKPGARGKQTRKNRAKNSKKPRQK
VQPRRLVVHEDEEEEEEEQEENEDEEQENDAKSSGDESEEEEEENEIVTRNTTRSRTTVV
KKTQQRVPQGSNASEEGEDSEDSDSEDSDEVDDDEEGGEQRSENGQTAIADNSDSDDDDD
SEVNVESSRSQRTVRSTRTSENDDEECETTRRIGKRPRYNVDSDDDDNDDDSSGNAPVRN
RRSVKRRYYAEESDEEGVAEPGISISSRGRVRKMTARARAYLREAP
NT seq
5361 nt
NT seq
+upstream
nt +downstream
nt
atggaggccggcacgtcgaggaccgagatcgccacagagccagaactgtactttctcata
gccaagtttctcgaggctggtccctgtcgcgaagtctctaatgcgctgaagcgggaattg
gaacgagctaagattttaccacaaaggatcgattgggaagggaattcgcataatcagact
ttcgaagagttggaaaaaaagtatcctcacattggaccaagtcatttattgcaaatatgc
gcaagaattggtcctgtactggagaaagaagtgccgccatgcgtacctggagcaatatct
cttctcggagcaggcagacaatccatgctccgcacaaaagaagatttcttgcaacaaatc
ggaggaatcgtcgcttattcaggaagattcggagggaagccttacctggacccgcctttg
cattcaacgatccacaatgttgttcgtgcgatccaagggcgagaaaattcaggaccactc
agtcgtcgtcaaatcgtacctacgaaattttattcgaaactccagatgtatcgtcacact
ctcggacatttgtcggctgtttactgcgtcctgtacgatcgtacaggcagatacgttata
acgggagctgatgatttacttgtcaaagtatggagtgtactcgacggtcgtttgttagcc
acttttcgcggtgcatccgctgaaataatggacattacagtgaatttcgacaatactctg
ctggctgccggaagcttagatcgtatacttagagtttggtgttttcaaactatgtcaccg
gttgctgttttatccgggcattctggtatgataacatcagttaatttttgtccaatttta
tgcaatggaattaattacttggtgtcaacaagcaccgatggatcggttgcattttggccc
cacaccaagaagtacaacgaacgtgcagttttccagacaaaaccgattcagtatcatgaa
aaaatgcgacctggacaagcacaaatgatttgtgcgtcgtttagtccgggtggcgcattc
atggcggccggctcggccgatcatcacgttcgtgtttacgcgatgctcggtgacgaaggt
ccgcgcagagttctcgaagtcgaagctcattcagacaccgtagatagcattcaatgggct
cacggtggcttaaaatttatttctggctctaaagacggtactgctaacgtttggcatttt
gagcagcaacaatggatgcataaacgcctcgcgatgacaacgaaacttcctggcgaaccc
gagtccgacgacgaatcaagcaaaaagaccaaagttacgatggttagttgggacgttagc
gacgagtgggtaataacggcggttagtgacagttcgttaaaagtctggaacgcgcggaca
ggcgaattgaccaaagttttgagaggacacaaggatgaagttttcgttctcgaatctcat
ccaatcgatcctcgagtgatattgagcgctggacatgacggacaattaattatttgggat
gtgttaaacaccgagccgattgtttcttttcaaaatttcatcgagggacaaggcaaggga
gcagttttcgatgctaaatggtcgcccgatggtactatgctcgcggctacggattctcat
ggtcatttattaatgtacggatttggttctggacctgaaaaattgaaaattgtaccaaaa
gaattgttctttcatacggactatcggccgttgattcgcgataccaataattatgttttg
gacgagcaaacgcaaacagcaccgcatctcatgccaccaccttttctcgtcgacgttgat
ggcaatccttatccccctgcgttacagcgcttggtaccaggacgtgaaaattgtcgtggg
gaacagctcgtaccaaatattgcggttggtgctagtggaatgcaagaagtgatagaaggt
ctgccaatgcacgagcctcgctcgaacatcgacaggcttatagaggctttggctcaacga
caaaatattcatggtcaagatggagaaccgattgatgaacgcgatgaaaatggcgaacct
caagtccgtcaaatagctagtccgcgtggccatcgacctggtttgcgaagagctggtgat
gtcgagggaattcgacagactagcggaaattggcaaagggacaatacgacgccctggaac
aagccgattcttgctcgacccgtacatcccgcgatacgcaaaactcaatcaagattgtta
aatgcaactgctgaaatggaattagaaaattggcggcgcgagatgaaacgcagacctcaa
gcagcagcgacgacgctagcgactcaaggaaatattggcactcgagcggccaatcggaag
cgcaacagaggcataagacacggctacagaacgcgagctgcgcgaggagaggagcaggac
gacgatgacatcgacaatatcgatgaaggcggatccggtagttcggttagtaacaacagc
aacgattcttccgccgaagaattaagctcggacacgacgacttccgaatccagtagcgaa
tactcagactggatcgcggatcacggtctcaatctcgagccaccaaaacgtagcaaacga
aagcgtgtcaacaaagtttctagcccaccttccggcgatgcggatcgaaagagaaacgag
ccgcgaaagaagaagttaccagtcgcacctgcagaggtgacggatgttccggatattttc
cgtccatcggaatggctcaccgaagctgtgcctcacaaaacgccttattatcctcaaatg
ggcgatgaagtagtttatttccgtcaaggtcatcaagcgtatatcgatgctattagacgg
aaaaaagtctacgatctcggacctcgatccgaaccgtgggcgaaaattaatttgagggca
cacgaattcgttaaagtcgtaggaataaaatacgaaattcgtcccccacggttatgctgc
ttaaaattagctctcatggacgaggatggccatttgacgggtcaaaattttaccatcaag
tatcacgatatgcaagacgtcgttgactttttggttctgcgacaaacattcgatactgcc
ctcggtcgtaattggtcggagggcgatcgttttcggtgtattatcgacgatagttggtgg
atgggaacgatcgaaacgattggaccgtacgacgaagctttccccgaatcttatttcttg
tgttttggagtccgatgggacaatggcgaagatgaaaaagttagtgcatgggatcttgaa
gcagttgattacgacagacttccgtccgtggtcggtggagccgttcccgttttaccagag
gaattgcaaacgatattgtaccaaccgcaaccagaagaatggccgatgggagatcgtgaa
gcagcttgtcgtagaatatcacgtggtttggaccaagtgatgggtttggcgatagccgag
cctttcacagcaccggtcgatcttaatctctatcctatttattcttacattgtcgaatat
cctatggatctttcgaccatcaaagcgagactggaaaatcacttttaccgtcggattacg
tcggcacagtttgacgttagatatctagccactaacgctgaacaattcaacgagccgcac
agtcaaatagtcaaacgtgctagaatcatcaccgacttgtgcctgaaaatcattaaagaa
aatgtcgagttggacatcccggcagtttatcaccagctggtcgacacttatcattcatca
gactccgaaatagacgtcgagtcaacgagagaacgaccttcgacgagccgtcaaagacca
acgacctcacgaaatttaaggtctcaggaagtttccaaagattggagaatagcgtgtcgg
caattgttggaaactctgtggcaatgcgaggattcgatacctttcagggaacctgtcgat
cgattagaaaatccagattatcatcacatagttgatacgccgatggatctacggaccgtt
aaagaagacttgatcggcggaaattacgaaagtcctctagaatttgccaaagacatgaaa
ctgatttttacaaatagtagaaattacaatacgaacaaaagatcacagatttatttgatg
acgataagactgtcagcgatgttcgaagaacatatgcgaaaaataatatcgacttggaaa
acagcgagacgacgaagtgaaaatgccaaagcaaaggcgaaagcgaatcaaaggaaaaag
gttaaaacacgactgaccaatggagctggaccatcgagagctaaaagcgaagattcttcg
gacgatgacgacgacaatgtcaatggtgaaaatgatgacgaagagcctgaagaaccggaa
aggaacgaaatcgaaccaacgaggcaacgaagaaggccacaaaatcctgatgcaccggga
ccgtcgacatcgcgaatgacaaacggtcatagcaagtcggcaggcaattcgtctcgtcaa
ttgagaaattcgcgcgtgacggcatcgaaaaaagtgaaaaacagtgagagcgaggcgagt
gaaagtgagatgtcgatggagagtgacagtagttttgaggagacgagacgccgtactcga
acgcgaaagccggttagtagtgtggccgacagtgattcgggcgacagttacaagccggga
gctcgtggaaagcagactcgaaagaatcgtgcgaaaaacagtaagaagcctcgtcaaaag
gtgcagccgaggcggttggtggtgcatgaggatgaagaagaggaggaagaagaacaagag
gagaacgaggacgaggagcaggagaacgatgctaaaagttcgggagatgagagtgaagaa
gaagaggaagagaacgaaattgtaacgcgcaatacgacgcgatcacgaacgacggtcgtt
aagaaaacgcagcaacgagtaccacaagggagcaacgcgagcgaagagggtgaagacagc
gaagattccgacagcgaggacagcgacgaggtcgatgacgacgaggagggaggagagcaa
cgcagtgaaaacgggcaaaccgcgattgcagacaactcggacagcgacgacgacgacgat
tccgaggtaaacgtcgaatcaagcagatcacagagaaccgttcgttcaacgaggacttcc
gaaaacgacgacgaagagtgcgaaactacacgaagaatcgggaaaagacctcgttacaac
gtcgatagtgacgacgacgataacgatgacgacagcagcggcaacgcacccgttagaaat
cgtcgcagcgttaaaagacgatattacgcagaggagagcgacgaggagggtgtcgccgaa
ccaggcatcagcatcagcagtcgcggccgcgtcagaaaaatgactgcccgggctcgtgca
tatctacgcgaagcgccctaa
DBGET
integrated database retrieval system