Venturia canescens: 122414040
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Entry
122414040 CDS
T09386
Name
(RefSeq) RNA-binding protein 25 isoform X1
KO
K12822
RNA-binding protein 25
Organism
vcan
Venturia canescens
Pathway
vcan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122414040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vcan03041
]
122414040
Spliceosome [BR:
vcan03041
]
Complex A
U1 snRNP components
U1 related factors
122414040
Complex B
122414040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
122414040
NCBI-ProteinID:
XP_043280767
EnsemblRapid:
LOC122414040
LinkDB
All DBs
Position
7:9016410..9026244
Genome browser
AA seq
895 aa
AA seq
DB search
MSYPGQPPLGIPGMPPGMPYMVGAPPPIMGGVMPMPHMIPTPISAMQTSAPAVRYPRNQN
RHEHVRRRERENGPPVTVFVGNIMDRAPDVMIRHILGACGHVLSWKRVQAFGFCEYAGPD
AGLRAVRLLHDMEIGTKKLVVKVDAKTKVVLDQFKAEKRKKLRGGQSPLQDETPSEGADG
DDNEDYMDEGMRIIDSEALSRINMIISEHTTELEMAQVVPEELPPKQPSKQLNLDDAEIE
ESKRDLITREIGKFREVMKKQEEEKAQVKRKKEAVEKEEREKREKERRDRRDDDAGLKND
HDGEPGSPISHKGRSGSTGSSRRDKRRSKSRSKERERDRAERQRNDRDRDRGERDRERDR
ERDRERDRDRDRDRERERERERERDRERERDREREREREEARKTEREIMREREEEEEAKD
RKKNERRAREKEAAYQERLRAWETRERRKQKEYEKEGEKKRSKREAREKEAKRLKEFLED
YDDDRDDAKYYKGKELSRRLEERALEAEADSRDRCAERQELQRLRDKLYADSSHPDPAAE
FERLKAEREEQYKPKPVITIIDEDDEKVQKEKEDVVMPPIETEPIDSDSDDGVHFEDAIQ
PEAPSRTPPRHHHHHRRHHRHHQNHHREDGSGDGITDNERETSKDKRASPVTVSGTTPSQ
PLPPSHDEDSRMSLVSEPEKTGGSNFVPFAMGGGGARGGDHAPVGSKTPASPGNVLVNSQ
QPNQTRKKTRIDVKDVFNNDDDDDGTNNSKKRKLIPLDYGEDKKKKVLEEASKTGKEENS
KSQEEKRKHIKSLIDKIPTDKNALFGYQLDWAVIDNTLMEKRIRPWINKKIIEYIGEPEP
TLVDFICSKVMAGSSPQGILDDVQMVLDEEAEVFVVKMWRLLIYEVEAKKMGLVK
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatcctggacaaccaccgctcggtatcccagggatgccaccagggatgccgtac
atggttggagcgccgccacccattatgggtggtgttatgcctatgccccatatgatccca
acacccatatctgcgatgcagacttcagccccggcagttcgttatccaaggaatcagaat
cgtcacgagcacgttcgacgtcgcgagcgggaaaatggaccacctgtgacagtttttgtt
gggaatattatggatcgtgcaccggatgtcatgattaggcatatactcggtgcttgtggc
catgttctctcgtggaagagagttcaagctttcggattctgcgagtacgcaggtcccgat
gctggtctcagagctgttcgattgctccatgacatggagattggaacgaaaaagcttgtt
gtcaaagttgatgctaagactaaagttgttttggatcagttcaaagctgaaaaacgaaag
aaacttcgaggtggtcaatcgcctttgcaagatgaaactccgagcgagggtgccgatgga
gacgacaatgaagattatatggatgagggaatgcgaataattgacagtgaagcactctcc
cgcatcaatatgatcatttcggaacacacaacggaattggaaatggctcaagtggttcca
gaggaactcccaccaaaacaaccgtccaagcagctcaatcttgacgatgcagagatcgaa
gaaagtaagcgagacttgatcacccgggaaattggaaaatttagggaagtcatgaagaaa
caagaggaggaaaaggcccaagtgaaacgtaaaaaagaagcggttgagaaagaggaacgt
gaaaaacgggaaaaagaacgaagggacagaagggacgacgatgccggactgaagaacgat
cacgatggtgaacccggcagtcccatttctcacaaaggtcgaagtggcagcaccggaagt
agtcggagagacaaaagaagatccaagtctcgatcgaaggaacgagagcgcgaccgtgcg
gagcgtcaaagaaatgacagggaccgggatcgaggagagcgggacagagagcgagatcgt
gagcgcgatcgagagcgagatcgtgatcgggatcgcgacagagagcgtgaacgcgagcgc
gaacgtgaacgagacagggaacgggagcgtgatcgagaacgagagcgggagcgcgaagag
gcgcggaaaaccgagcgcgaaataatgcgcgaacgggaagaagaggaagaagcgaaagac
cgtaagaagaacgagaggcgggctcgagaaaaagaggctgcttatcaggagcgcttgaga
gcttgggaaactcgagaacgtcgtaaacaaaaggagtacgagaaagagggagagaaaaaa
cggagcaagagagaggcgagggaaaaagaggctaaacgtttgaaagaatttctcgaggat
tacgacgacgatcgcgatgatgccaagtattataagggaaaagaattgtcccggcgtttg
gaggagcgggcactcgaagcggaagctgactcccgtgaccgatgcgccgaacggcaggag
cttcaacgtcttcgtgacaagttgtacgccgattcttctcatcccgatccggctgctgaa
ttcgagaggttgaaggccgagagagaggaacagtacaagccgaaaccggttataacgata
atcgacgaggatgacgaaaaggttcaaaaagaaaaggaagacgtggtcatgccgccgatc
gaaaccgagccgattgacagtgacagcgacgacggtgtgcacttcgaagacgctatacaa
ccggaagcaccttcgagaacgcccccgcgtcatcatcatcatcatcgacgacatcatcgt
catcatcaaaatcatcatcgtgaggatggctccggggatggaatcaccgacaatgagcgc
gaaactagcaaggacaagcgcgcctcgcccgtcaccgtttccggtacgacaccctcacaa
cctttgccaccctcacacgacgaagactcgcgaatgtcgcttgtcagtgaaccggaaaaa
accggtggaagtaattttgtgccatttgctatgggtggtggtggagctcgaggtggagat
cacgctcctgtcggtagcaaaactccagctagtccgggcaacgttcttgttaattcccaa
cagccgaatcagacgaggaaaaagacgcgtatcgacgtaaaagatgtttttaacaatgac
gacgacgacgacggaacaaataactcgaaaaaacgaaaactcattcctctcgattacggc
gaggataaaaagaagaaagttctcgaagaagcttcgaagactgggaaggaggaaaactcg
aagagtcaagaggaaaaacgaaagcatatcaagtctttgattgacaaaatcccaacggac
aagaatgcattgtttggttatcagctcgattgggcggttatcgacaacactttgatggag
aagagaatacggccttggataaacaaaaaaataattgaatacatcggtgagccggagcct
acgctcgttgattttatatgcagcaaagttatggctggcagctccccacagggtatactc
gatgatgtacaaatggtattggacgaagaggcagaggtattcgttgtgaaaatgtggagg
ttattaatatacgaagtggaagccaagaaaatgggattagtgaaatga
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