Venturia canescens: 122414107
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Entry
122414107 CDS
T09386
Name
(RefSeq) ATP-dependent RNA helicase p62-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
vcan
Venturia canescens
Pathway
vcan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122414107
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vcan03041
]
122414107
03009 Ribosome biogenesis [BR:
vcan03009
]
122414107
Enzymes [BR:
vcan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122414107
Spliceosome [BR:
vcan03041
]
Complex A
U1 snRNP components
U1 related factors
122414107
Complex B
122414107
Ribosome biogenesis [BR:
vcan03009
]
Eukaryotic type
Pre-60S particles
Helicases
122414107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
122414107
NCBI-ProteinID:
XP_043280913
EnsemblRapid:
LOC122414107
LinkDB
All DBs
Position
7:11854357..11861099
Genome browser
AA seq
548 aa
AA seq
DB search
MTYGGSSGGYRSGGTGGSRGGMGQRNGYGSGGGNGGRFGGNRGSSNAGGGAMGRNGGRGG
GAGGNLRKPNWDYENLKPFKKDFYIPHPNVSSRHPREVDTFRETKQITLKGEKLPNPIQF
FEEGNFPDYVMQGIRKQGFSEPTAIQAQGWPIAMSGRNMVGIAQTGSGKTLGYILPAIVH
INSQQPLNRGDGPIALVLAPTRELAQQIQTVANDFGSLSYVRNTCIFGGAPKGSQARDLE
RGVEIVIATPGRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQV
LMWSATWPKEVRNLAEEYLTDYTQLNIGSLSLSANHNILQIVDVCQEHEKEAKLGTLLQE
IGNVNEDGGKTIIFVETKKKVENITRNIRRYGWPAVCMHGDKSQQERDYVLREFRNKKGS
ILVATDVAARGLDVDDVKYVINFDYPSSSEDYIHRIGRTGRSESTGTSYAFFTPQNGRQA
KDLINVLQEANQVINPKLSELAARGGGGGYGARNRWGYGGSGRGRENSFSGVHKRFDSGR
SNGFNSYS
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgacttacggaggttcatccggtggttatcgtagtggcggtactggtggaagtcgtggc
gggatgggtcagcgtaacggttatggttcaggtggaggaaacggtggacgttttggagga
aatagaggaagcagtaatgcaggaggaggtgcgatgggaagaaatggtggaagaggtgga
ggtgcgggtggaaacttgaggaaaccaaattgggattatgagaatttgaagccattcaag
aaagacttttacattccacatccgaacgtatcgagtcgtcatccccgtgaggtcgacaca
ttcagggaaaccaaacaaattactttgaagggtgaaaaattgccgaaccccatacaattt
tttgaagagggtaatttccctgattacgttatgcaaggaatcaggaagcagggcttttct
gagccaactgcgatccaggctcaaggctggccaatcgccatgtctggcagaaatatggtg
ggaatcgctcagactggatcgggcaaaacacttggttacattttgcctgctattgttcat
atcaacagccaacaaccactcaatcgtggagacggaccgattgctctcgttcttgcacca
actcgcgaactcgcccaacagatccaaaccgtcgcaaacgattttggctcgctgtcctac
gtcagaaacacttgcattttcggaggtgctcctaagggcagtcaagcccgcgatttggaa
cgtggagtcgaaatcgtcatcgcaacacctggacgactgattgatttcctcgaacgtggc
accactaatcttcgtagatgcacttatctcgttctcgatgaagccgatcgcatgttggac
atgggattcgaaccacaaatccgtaaaatcattgaacaaatcagacctgatagacaagta
ctcatgtggtccgctacctggccaaaagaagtgcgaaacttggccgaagaatatcttaca
gactacactcaactgaatattggatcgttgtcactttcggctaatcacaatattctacaa
attgttgatgtttgccaggaacatgagaaagaagcaaagttgggaactttactccaagaa
attggtaatgtaaatgaggacggtggaaagacaattattttcgttgaaacgaagaaaaaa
gtagagaacatcacaaggaacattcgtcgttatgggtggcctgcagtgtgcatgcacggc
gataagtcacaacaggaacgcgattatgttctcagagaattcagaaacaagaaaggctcg
attcttgtagctacggacgtggctgcccgtggtctggacgttgatgacgtgaagtacgtg
atcaacttcgattatccgtcgtcgtccgaggattacatccacaggattggcaggacagga
cggtccgaaagtacaggcaccagctatgcctttttcacaccgcaaaatggtcgtcaagct
aaggatctcatcaatgtactgcaagaggctaaccaagtcatcaaccccaaactttcggaa
ctcgctgcgagaggcggaggtggcggttatggagcgagaaaccgttggggctatggcgga
agtggacggggaagggaaaattcattttcgggagtgcacaaacgtttcgacagcggacga
agcaacggattcaacagttacagttga
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