Venturia canescens: 122414243
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Entry
122414243 CDS
T09386
Name
(RefSeq) piwi-like protein Siwi
KO
K02156
aubergine
Organism
vcan
Venturia canescens
Pathway
vcan04320
Dorso-ventral axis formation
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09150 Organismal Systems
09158 Development and regeneration
04320 Dorso-ventral axis formation
122414243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vcan03036
]
122414243
Chromosome and associated proteins [BR:
vcan03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
122414243
piRNA pathway
122414243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
Piwi_N
ArgoN
ArgoL1
Motif
Other DBs
NCBI-GeneID:
122414243
NCBI-ProteinID:
XP_043281262
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Position
7:complement(11049310..11058168)
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AA seq
872 aa
AA seq
DB search
MSDEYSRQDHLKGEDEAPRHYGQQPRPHEPEAWTQSYSATSREQSSSHQSQNIGHSMSRT
SAGSSSSAGGPSTSGQSTRGSRGGGGGDSSRGRGMSRRQQMTRAEVFQTRPKELLTKQAL
CTPKDCESVQLQANYFKMLSSTNWCLYKYRVDYAPEIDLTRRRKALLREHKPTLGPFIFD
GTVLYTSHRLPEPLELQSKMQPEDTDVQISIRFVGDMGKGDEHYIQFFNIIMRKCLEYLN
LQLVGRNYFDAQNQVEVHQYKLSLWPGYETSIRQMERDILMCAEITHKVMRQQTLLDILN
DCYREHGNQYQERFKAQVIGLTVLTDYNNHTYRVDDVDFDVSPRSTFSRAGVEVSYVEYY
LNKYQLRIRQESQPMLLSRTKARDRRAGLSELVYLVPELCRSTGLTDDMRRDFRMMRELG
THTRLNPNGRIQRLLSFNRRLQNEPKVVQELSEWNLRLDDKLVTLPGKILKPETIHFGQR
QTKTTDAQADWTRDICRNQMYTSNKLQNWCVIVPNRQARDAEAFVQSIRSCVRQMNFPIS
TPQVHVINDDHASTFTSTIERVLSQANPQIVMCVLPNNRADRYSAIKKKCCVDRPVPSQC
ILAKNLQGKGVASIATKVAVQMNCKLGGCPWTVAIPLKGLMIIGFDICRDPHVRGRDYGA
MVASLDQNHTRYFSAISATTSGEELTSSLTANIIKALHKYHELNKALPSRMVIYRDGVSD
GQIPFVHDHEVQYIRRKLEELYGDPSLVKMAFIIVTKRLNTRLFLRGNNPPPGTVVDDVI
TNPIKYDFYIVSQCVKQGTVSPTGYSVISDNVNLDAGKLQKLTYKLTHMYFNWSGTVRVP
APCRFAQKLATLVSQALHANPSPQLETVLFFL
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacgagtacagtcgtcaagatcatctaaagggtgaagatgaagctcctcgacac
tatggccagcagcctagaccccacgaaccagaggcttggacccagagctattccgccaca
tcaagggaacaatcttctagtcatcagtcacagaatataggtcactcaatgagcaggact
tctgctggatcatcatcatctgccggtggaccatctacatcgggtcaatcaactagaggc
tccagaggaggaggaggaggagattcctccagaggacgtggaatgtcacggagacaacaa
atgacaagagcggaagtctttcaaactcgacctaaggagttgctgacgaaacaagctcta
tgtactcccaaggattgcgagagtgttcagctgcaagctaactacttcaaaatgctctca
tcaacgaattggtgtttgtacaaatatagggtcgattacgctccagagatagacttaact
agaagacgaaaggcgttgcttcgggaacacaagcccactctaggaccgtttatttttgat
ggtaccgttttgtacacgagtcaccgattgccagagccgttagaactccaaagcaagatg
cagccagaggacaccgatgttcaaatatccataagattcgttggtgacatggggaagggt
gatgaacactatattcagttcttcaatataataatgcgcaaatgccttgaatatttgaat
ctgcaacttgtcggaagaaattattttgatgcccaaaaccaggttgaagtacaccaatac
aaattgtccttgtggcccggttacgagacttcaatacgtcaaatggaacgtgatattctg
atgtgtgctgagatcactcacaaagttatgcgtcagcagacattgctcgatatcctcaat
gactgctacagagaacacggcaaccagtatcaggagagatttaaggctcaagtgattgga
ctcacagttctcaccgattataataatcacacctacagagtcgatgacgttgattttgac
gtatccccgagatcgacattttcgcgcgctggcgtcgaagtttcttacgtagaatattat
ctcaacaaatatcagctccgcataagacaagagtcacagcctatgctcctgtccagaacg
aaggcgcgcgatcgccgagctggcctttctgagcttgtgtatctcgtaccggagctctgt
cgatcaaccggtctaaccgacgacatgcgccgggattttcgaatgatgcgagaacttggg
acccacacgagactgaatccaaacggtcgaatacaaagactgctcagcttcaaccgacga
cttcaaaatgaaccaaaagtcgtgcaggagctgagtgagtggaatctcaggttggatgac
aagctcgtaaccctgccgggtaagatattaaaacccgaaactattcatttcggacagcga
cagacgaagactactgatgcacaagccgactggactcgtgacatttgcaggaatcaaatg
tacacgtcaaacaagctgcagaactggtgtgtcatcgttcccaatcgtcaggcacgtgac
gctgaagcctttgtccaatcgattcggagctgcgtgcgtcaaatgaatttcccaatatcc
acaccgcaagtccacgtaattaatgacgaccacgcaagtacgttcacgtcaacgatcgag
agagtgctgagtcaggcgaatcctcagattgttatgtgcgtcctaccgaacaatcgtgct
gatcgatactccgcaattaagaaaaaatgttgcgtcgatcgtccagttcccagtcaatgt
attctagctaagaacctccaggggaaaggagttgcttcaatcgccacaaaagtcgcggtt
caaatgaactgtaagctcggtggatgtccatggacggtggctatacctctgaaaggtctc
atgattattgggttcgatatttgccgtgaccctcatgtcagaggtcgagattatggtgcg
atggtagcgtcccttgatcaaaatcatacgagatacttctccgcaattagtgctaccacc
agtggcgaagaattaacgagcagtttgacggcgaatataatcaaggcacttcacaagtac
cacgaattgaacaaagcactgccgagtcgaatggttatatatcgtgacggagtcagcgat
ggacagattcctttcgtgcacgatcacgaggttcaatatatcaggcgaaaacttgaggag
ctgtacggtgacccgagcttagtcaaaatggcgtttataatcgtgaccaaacgcttgaac
acgagattgttcttgagagggaataacccgccacctggcacagtggtcgacgatgttata
acgaatccgattaaatacgatttttacatagtctctcagtgcgtgaagcaaggcacagta
tcgcccactggttacagcgttatttcggacaacgtaaacctcgatgctggaaagttacaa
aaattgacatacaagctgactcatatgtatttcaactggagcggcactgtcagagtaccc
gcaccctgtcgatttgctcaaaagcttgctaccctcgtttctcaggcattgcacgcaaac
ccgagtcctcagctcgagactgttctgttttttttgtaa
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