Venturia canescens: 122414319
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Entry
122414319 CDS
T09386
Name
(RefSeq) cadherin-23-like
KO
K06813
cadherin 23
Organism
vcan
Venturia canescens
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
vcan03037
]
122414319
04515 Cell adhesion molecules [BR:
vcan04515
]
122414319
Cilium and associated proteins [BR:
vcan03037
]
Primary cilia and associated proteins
USH complex and associated proteins
122414319
Cell adhesion molecules [BR:
vcan04515
]
Cadherins
Major cadherins
122414319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_FAT4_N
Motif
Other DBs
NCBI-GeneID:
122414319
NCBI-ProteinID:
XP_043281406
LinkDB
All DBs
Position
1:complement(35247383..35270811)
Genome browser
AA seq
1646 aa
AA seq
DB search
MAFPLKIALLMVYLSVPMKTVRGDSASYSIVAPDPKDEAVQFNFDAAKKRADIELDEELD
HPVCVAVLNYTDVTAPEIGAFKDDKSNYVLGAEFKQDNATKRWSLWINNKQDYEQEEMRE
YLVPVYVSNQPFLIALHIQNIDDNPPVIQAVEKNCKIKENFKGPSNCSYIIKDADGSIDQ
VKITLSPESERKYFQLIPSADEKSNYELKAVLHVNESLDFETTSIHMLEIQAIDTGGHKG
TLDVVVSVIDVADQPPVWTRIIPVVYMSEKSIHRFNVSAIDGDFQINAVINYAITISEEG
DENLFVVDKETGVITIHEIDRDKRKQEIFHFLITAYEKMDPPSNISQNIFVILEDLNDHS
PEITPDSLNITIDEETYRTLEFNQPIEIQDPDLAENAQFSVSLVDTSKHNWSSAFAVLPT
TGYQKGVFTISVSNASLLDYENPDWQNIRIQLRATEQKNTTHVGMKDIYISLHNLNDELP
IFDKNSPSSVNVSEDVQEHALVAKVHATDRDIDDNVTHSLVGQGSLTIDEKTGEIFTKAD
ALDYESMPTVIVQIVATDLALHKTYTVLTINVEDVNDVPPKLSLPKESPTLEEEVKIGTI
VNATISATDIDTDPELKFSIDWANSRAQKGSVDVNESYYRGRLEILTKEISKNQVEGTLN
VAGRIDYENFDVIFLNISVTDKKTKHNENTTSALLTLYIKDINDNAPVFINPVNLMDVNE
NQVKNLTIGILTATDADGPQFNKVSYSIKPMNNTKDGLVFIDGGTGMIKVDKDKGIDAEE
YEYLYYIVTATDGYLKTPINVSIYVNDLNDVVPELCDEKFNSTLYIPEKTDNGKFIVKIE
GKDYDRESPFNNISYLINENYSAPMEYFGIGRFDGRITVNLTDGFILDRDRGPSEFTLNL
KLRDNYIQDGTTWNTNSIDTAVKIILTDINDKEPVLPDLGDPASSVSENTDKDRVVLRVV
ADDQDDPKTNNTKVSYAIKNITSANGNYVRDESCKALFDVRTVEESIAEIFTTCHLRGYY
GRWIIELYAEDRGTEPHGPLNYTRNYVIDVTDFNYDQPQILFPNTTKIPLRKDQTPHAPL
RTYDNTLLNDFRADDKDHGDSGLVTFSLRSATGDHEKFEIRPISKNVAQLRQAQALYPNG
TKYIYELTIVAKDGGNPPFNTTRDIQLMYAVKSGPSFENNTLTMSIKENKTGLDYRQKIP
EASDMIGEHILPVYYFFMTSDDTKYFALNKSSREFTLKEELDREKQDRMIIHVVATPYED
VPPTNPLPESVLEITIIVLDVNDEAPVFNNKSYRAGVAMEDERDKLLLAVEAVDADLDDK
LTYNIIPNSTTISNPTLNGVKDPFSLNTETGNLVLKFKVTDEMRGFFAFNISVHDAVNHT
DTTAVWVHIAPQTYRIVFTFNNLRRKVEQEKTFVIATFTKTFGYLCVIDDIKNTLQTNKQ
VNDNVTAVTTHFVDSKDQELVQYDTIIRLSSEAQTISNLKAIFLANQLELLDVPISGSTD
ANNETEIVHWLLVSLTIFFFSCSITLLAVFIIKTKRLNQRLDKLAITRYGSQESDLDRIG
KVPTTNQFAAAGSNPMWKTEKSFGDNLSQGSGGSDLIGIEDNPDFGYVNGAIMSQEKWQN
SNERHGYPVFSSHEFNTNNQHQEASI
NT seq
4941 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttcctcttaaaattgctctattgatggtgtacctatcggtaccaatgaaaacc
gtccgtggtgattcagcatcctattctatcgtcgctcctgatccgaaagacgaggccgta
caattcaattttgacgcggctaaaaaacgtgcagacattgaactcgacgaagaactcgac
catccggtttgcgttgctgtactcaattacaccgatgttacagctcccgagatcggtgcg
tttaaggatgacaaaagtaactacgtcctgggtgctgagttcaagcaggacaacgccaca
aaacgttggtctctttggataaacaataaacaagattatgagcaagaggagatgcgggag
tacttggttcctgtatacgtgtcaaaccagccgttcctcatagctcttcacatacaaaac
atcgatgacaatccaccagtcatacaggcagttgagaaaaattgtaaaattaaggaaaat
ttcaaaggcccatcgaattgcagctacataattaaggatgcggacggatccattgatcaa
gttaaaatcactttgagtccagaatcagagagaaaatattttcaactcataccctcggcc
gatgaaaagtcaaattacgaactaaaagcagttcttcacgtgaatgaaagccttgacttt
gaaaccacgtcaattcacatgctggaaattcaagcgattgacaccggtggacataaaggg
actctcgacgtagtcgtgtcagtgattgatgtagctgaccagccaccagtttggacgcgg
ataattcctgtcgtatacatgtcagaaaaatcgattcaccgtttcaacgtatcggcaata
gatggagacttccagatcaacgcggtgatcaattacgcgattacaatttccgaggagggt
gacgagaatttgtttgtggtagacaaggagactggcgttatcacgatccacgaaatagat
cgggataaaagaaagcaagagatttttcacttcctcataactgcttacgaaaaaatggat
cctccctcaaatataagtcaaaatatttttgtcattctcgaagatttgaacgatcattcg
cctgagattacacccgacagtctgaacattacgattgatgaggaaacatacagaacactc
gagtttaatcaaccgatcgaaatccaagatccagatttggcagaaaatgctcagttttct
gtgagtctggtagacacctcgaagcacaattggagctcggcgttcgctgtattacccacc
acgggttatcagaaaggagtattcactatttctgtcagcaatgcctcccttctcgattac
gagaacccggactggcaaaacatcaggatacagctgcgagcaaccgagcaaaaaaatact
actcacgtgggcatgaaggacatttacatcagtctgcataatttgaacgatgaattgcca
atattcgataaaaattctccctcgagtgtcaacgtatccgaagatgttcaggaacatgcc
cttgtagccaaggtccatgctactgatcgtgatatcgacgacaatgtcacacactcctta
gtgggtcagggatccttaacgatagacgaaaaaacgggcgaaatttttacgaaggcagat
gctttggattatgaatctatgccgacagttattgtgcagatcgtcgcaacagatctggct
cttcacaaaacttatacagtcttaacaatcaatgtcgaagacgttaatgatgtaccacca
aagctgtccttgccgaaggaaagtccgacgcttgaggaggaagtgaaaatcggaactata
gtcaatgcaacaataagcgcaacggatatcgatacagatccggaattgaaatttagtatc
gattgggcgaattcgagagcccagaaaggaagcgtcgacgtcaacgaatcttattaccgc
gggcgtttggaaatcctgacgaaggaaatcagcaaaaatcaggtcgagggtactttgaac
gtcgccggacgaatcgattacgagaattttgacgtcatattcctcaacatttccgtaaca
gataagaaaaccaaacacaacgagaatacgacttctgctctgttgactctgtacatcaaa
gatatcaacgacaatgccccggtatttataaaccctgtgaatctaatggatgtcaatgaa
aaccaagttaaaaacctgacgattggaatcctaactgcaacggatgctgatgggcctcaa
ttcaacaaagtctcgtattccataaagccaatgaacaatacgaaagatggcctcgtgttc
atcgacggcggaactggtatgatcaaagtcgacaaggacaaaggaattgacgccgaggag
tatgaatacttgtattatatcgtaacagcaacagatggttatctaaagacgccgataaat
gtatcgatttacgtgaatgatttgaatgacgtggtgcccgaattatgcgatgaaaaattc
aattcaacgttgtatatacctgaaaaaacagataatggaaaatttattgtgaaaattgag
ggcaaggattacgatagagaatcacctttcaacaatatatcgtacctcataaacgaaaat
tattctgcaccaatggagtacttcggtataggaagattcgacggtagaataacggtcaat
ctcactgatggattcatcctcgatcgtgatcgtggtccctccgagttcacgttgaattta
aaacttcgtgacaattacattcaggacggcacgacgtggaataccaattcaattgacacc
gcggtgaaaatcattctcacggacatcaacgacaaagagccagttcttccggacttgggt
gacccggcgtcaagtgtgtccgaaaatacggacaaggatcgcgtggtgctccgagttgtg
gctgacgatcaggatgacccgaagacgaataacacgaaagtatcttacgcgataaaaaac
attacttcggctaacggaaactacgtcagggacgaaagttgtaaagctctctttgacgtt
cgaacggtggaagagtccatcgctgaaatattcacgacttgccatctcagaggctattac
gggcgctggattattgaactttatgccgaagatcgaggcacggaaccccacggaccactg
aattatacgagaaactacgtcatcgatgtcaccgatttcaattacgaccaacctcaaata
ctgtttccaaacaccacaaaaataccactcagaaaggaccaaacaccgcatgcaccatta
agaacgtacgacaacactttgctcaatgactttcgtgcggatgacaaagaccatggagat
agcggactagtcacattttcattaagaagcgcaactggggaccatgaaaagttcgagatc
agaccaatcagtaaaaacgtagcccagttacgtcaagcacaagcgctatatcccaatggg
acgaagtacatctacgagttgacaatagtggccaaagatggtggaaatcctccgttcaac
acgacacgggacattcagctaatgtatgccgtcaaatctggtccgagcttcgaaaacaac
actttaacaatgtcaattaaagagaataaaacgggacttgactatcgtcaaaaaatccct
gaagccagtgacatgatcggtgaacacatcttgccagtttattacttcttcatgactagt
gatgacactaagtactttgcattgaataaatcatctcgtgagttcactctgaaagaagaa
ctcgatcgtgaaaaacaggacagaatgataatccacgtggttgctacgccatacgaggat
gtaccaccaacaaatccgctgcccgaatcagttttggagatcaccatcatcgtactcgat
gtgaatgacgaagcgccagtttttaacaacaaaagttatagagctggtgttgcgatggaa
gacgaacgcgataagcttcttcttgctgtggaggctgtggatgctgacctggacgataaa
ttaacttacaacataattccgaatagtacaacgatttccaatcccacgctaaatggagtc
aaagatcctttctcgttgaatactgagaccggaaacttggttctgaaattcaaagtgact
gatgaaatgcgaggattcttcgctttcaatatcagtgttcatgacgcggtgaatcataca
gatacaacggctgtttgggttcacatcgctccgcaaacctaccgaatcgtctttacattc
aacaatttaaggcgtaaagttgaacaagaaaagacattcgtaatcgcaacgttcaccaaa
acatttggatatttgtgcgtcatcgatgacatcaaaaatacgctccagacgaacaagcag
gttaatgacaatgtaacagctgtcacgacccactttgtagactccaaggaccaggagctc
gttcaatatgatacaattattcggttatccagcgaagcccagactattagtaatctcaaa
gccatttttctcgcgaatcaactcgaacttttggacgtacctatcagtggctccaccgac
gcgaacaatgaaacagaaatagttcactggctcctcgttagcttgacaattttcttcttt
tcgtgtagtatcacgctcctcgctgtgtttattatcaaaacgaagagattgaaccaacgg
ctcgacaaactcgcgatcacgcgatacgggtcccaggagtcagatttggaccgcatcgga
aaagttccaacgaccaatcaatttgctgcagcgggatcgaatcctatgtggaaaacagaa
aaatcgttcggtgataatttgagtcaaggtagcggtggctccgatttgattggaattgaa
gataatccggacttcggttatgtaaacggtgcaatcatgagccaggaaaagtggcaaaat
agtaacgagagacacggatatcctgttttttcgagccatgaattcaacaccaataatcaa
catcaagaagcatcaatctaa
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integrated database retrieval system