Venturia canescens: 122414337
Help
Entry
122414337 CDS
T09386
Name
(RefSeq) calcium-activated potassium channel slowpoke isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
vcan
Venturia canescens
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
vcan04040
]
122414337
Ion channels [BR:
vcan04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
122414337
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
122414337
NCBI-ProteinID:
XP_043281445
LinkDB
All DBs
Position
1:35144931..35245227
Genome browser
AA seq
1163 aa
AA seq
DB search
MTYDETTEQTQDDGCLHERKWWCFVLSSIFTFLSGLLIVLLWRAFAFLWCRKEPEFAPND
PKQKEQKAARQSKEFEGTFMTEAKDWAGELISGQTTTGRILVVLVFILSIASLIIYFIDA
SNSEQVERCQKWSNNITQQIDLAFNIFFMVYFFIRFIAASDKLWFMLEMYSFVDYFTIPP
SFVSIYLDRTWIGLRFLRALRLMTVPDILQYLNILKTSSSIRLAQLVSIFISVWLTAAGI
IHLLENSGDPFEFTNPQPLSYWTCVYFLIVTMSTVGYGDVYCQTILGRTFLVFFLLVGLA
IFASCIPEIIDLIGTRNKYGGTLKNERGRRHIVVCGHITYESVSHFLKDFLHEDREDVDV
EVVFLHRKPPDLELEGLFKRHFTTVEFFQGTIMNPIDLQRVKVHEADACLVLANKYCQDP
DAEDAANIMRVISIKNYSDDIRVIIQLMQYHNKAYLLNIPSWDWKQGDDVICLAELKLGF
IAQSCLAPGFSTMMANLFAMRSFKTSPDTQAWQNDYLQGTGCEMYTETLSPSFTGMTFPQ
ASELCFTKLKLLLLAIEIKGEEGADSKISINPRGAKIAANTQGFFIAQSADEVKRAWFYC
KACHEDIKDETLIKKCKCKNLGQQQRSWGRDLVATFRKGVRAVQMVGRASEDYSYPNDHH
PPPTFTPPELPKMVHVRGEISREREDPNAMRNHRNSVGMTTINSTKQVNKVKPNVNRAAS
DSLTSPNQPYNQRSQEESAYPGYRLAYEVKKLMPTSRASGGANVNNNGGLQIGIADDQAK
DFDFEKTEMKYDSTGMFHWSPARNLEDCILDRNQAAMTVLNGHVVVCLFADPDSPLIGLR
NLVMPLRASNFHYHELKHVVIVGSVDYIRREWKMLQNLPKISVLNGSPLSRADLRAVNVN
LCDMCCILSAKVPSNDDPTLADKEAILASLNIKAMTFDDTIGVLSQVGSPIVLQRRGSVY
GANVPMITELVNDSNVQFLDQDDDDDPDTELYLTQPFACGTAFAVSVLDSLMSTTYFNQN
ALTLIRSLITGGATPELELILAEGAGLRGGYSTADSLANRDRCRVGQISLYDGPLAQYGE
GGKYGDLFVAALKSYGMLCIGLYRYRFRDTSSSCDASSKRYVITNPPDDFTLLPTDQVFV
LMQFDPGLEYRPSRGARGKDDAS
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgacgtacgacgagacgaccgagcagactcaggatgacggctgcctccacgaacggaaa
tggtggtgcttcgtactatcgagcattttcaccttcctctctgggctgctgatcgtcttg
ctctggcgggcgtttgcctttctctggtgtcgaaaggagcctgaattcgctccaaatgac
cccaaacagaaggaacagaaggccgcccgccagagcaaggagttcgaggggaccttcatg
accgaggccaaagattgggctggcgagctcatttccggtcaaaccacaacaggacgtatc
cttgtggtattggtcttcatcctcagtatagcatcgcttataatatatttcatcgacgcc
tccaacagcgaacaggtcgagcgctgccagaaatggagcaacaacattactcagcagata
gacttagctttcaatatattttttatggtctacttttttatacgctttatcgccgccagt
gacaagctgtggttcatgctggagatgtactcgttcgtggactactttacgataccaccg
tctttcgtctcgatctatctggatcggacgtggatcgggctgagattccttcgtgcccta
cgactgatgacggttcccgacatcctccagtacctcaacattctaaagacatcgagttca
attcgactcgcccaactcgtctccatattcatctccgtctggctgaccgctgctggcatc
attcatttgctcgaaaactcaggggaccctttcgagttcacgaatccgcagcccctttcg
tattggacatgcgtttacttcctgatcgtgacgatgtccacggtaggatacggtgacgtt
tactgccaaacaattcttggccgcacatttctagtattttttctactcgtcggtttggcc
atattcgccagttgtatccccgagataattgacctgatcgggacgcgaaacaagtatggc
ggcactttgaagaacgagcgaggtcgcagacacattgttgtgtgcggccacatcacctac
gagtctgtctcgcacttcctcaaggatttcttgcacgaggatcgggaggatgtcgatgtc
gaggtcgtattcttgcacaggaagccaccagatcttgagttggagggactgttcaagcgg
cacttcaccacagtggaattctttcagggaaccatcatgaatcccattgatctgcaacgg
gtgaaggtccacgaagctgatgcgtgcctggttttggctaacaaatactgtcaggatcct
gatgccgaagacgcagccaatattatgagagttatctcgatcaagaattactccgacgat
attcgtgttattattcaacttatgcagtaccacaacaaggcctatttattgaacattcca
tcgtgggactggaagcagggtgacgatgtaatttgtcttgcggagctgaagttgggcttc
atagcgcagtcctgtctagcaccgggtttcagcacgatgatggcgaacctgtttgctatg
cgatctttcaagacgtcgccggacactcaggcgtggcagaatgattacctgcagggcacg
ggctgcgagatgtacacggaaaccctctccccgtcctttaccgggatgacttttccccaa
gccagcgaattgtgcttcacaaaattgaagcttcttctactggccatcgagataaagggc
gaggaaggtgctgacagcaagatttcgattaatccacgaggtgccaagatcgctgccaat
actcagggattcttcattgctcaatcagccgacgaggtcaaacgggcgtggttttactgc
aaagcatgccacgaggatatcaaggacgagactctgatcaagaagtgcaaatgcaaaaac
ttggggcagcagcagcgctcctggggccgagacttagtggccacattccggaagggcgtg
cgagctgttcaaatggttggaagagcaagtgaagactactcgtacccaaacgaccatcat
cctccccccacattcactccgccagaactgcccaagatggttcacgtcagaggtgagatc
agtcgcgaacgagaagatccaaatgccatgagaaatcatcgtaactccgtgggaatgacg
acgataaactcaacgaagcaagttaacaaggtcaagccaaacgtcaacagagctgctagc
gacagtttgacaagcccgaatcaaccgtacaatcagagatcgcaagaggagtctgcatat
cctggctaccgtctcgcctacgaagtcaaaaaactcatgccaacaagtcgagcttcgggt
ggtgccaatgtgaataacaacggtggcctccagataggcattgccgacgatcaagcaaaa
gattttgatttcgaaaagacagaaatgaagtatgactcgacgggtatgtttcattggagt
cctgcccgaaacctcgaagactgtatacttgatcgtaatcaggcggcaatgacagtactt
aatggtcacgttgttgtatgcctatttgccgatcccgattcgcctcttattggactgaga
aaccttgtcatgccattacgagcttccaattttcattaccacgagcttaaacatgtagtg
atagttggctctgtcgattacatacgacgggagtggaagatgctgcagaacctgcccaag
atttccgttcttaatggttcaccattaagccgagcggatctccgtgccgtaaatgtaaat
ctatgcgacatgtgttgcatcctgtcggcaaaagtgcctagcaatgacgatccaaccctc
gccgacaaggaggccattctcgcgtccctaaacatcaaggcaatgaccttcgacgataca
atcggtgtactgagccaagttggtagtccgattgttctacagcgacgtggttcagtttac
ggtgctaatgtaccaatgatcaccgaacttgtaaacgacagcaacgtgcagttccttgat
caggacgacgacgatgatccggacacggagctttatttgacacaaccgtttgcctgtggc
actgccttcgctgtcagcgtacttgactccttaatgtcaacgacatacttcaatcagaac
gcgttgactctcatacgatcgttaattaccggcggagcaacgcccgaactcgaattaatt
ctagccgaaggggcaggccttagaggtggttacagcactgcggatagtctggctaatagg
gatcgatgtcgcgtcggtcaaatatcgttatacgatgggccattggctcaatacggagag
ggaggcaagtacggtgacctctttgtcgcagcattaaagtcgtatggaatgctgtgcatt
ggtctgtacaggtacaggtttcgtgacacaagctcttcttgcgacgcatcctccaagcgt
tacgttattacaaatccacccgatgattttactctcttacccacggatcaggttttcgta
ctgatgcagtttgatccgggcctcgagtatcgaccaagtcgtggtgcgcgtggaaaggac
gacgcttcctga
DBGET
integrated database retrieval system
