Venturia canescens: 122414479
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Entry
122414479 CDS
T09386
Name
(RefSeq) ATP-dependent RNA helicase dbp2-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
vcan
Venturia canescens
Pathway
vcan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122414479
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vcan03041
]
122414479
03009 Ribosome biogenesis [BR:
vcan03009
]
122414479
Enzymes [BR:
vcan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122414479
Spliceosome [BR:
vcan03041
]
Complex A
U1 snRNP components
U1 related factors
122414479
Complex B
122414479
Ribosome biogenesis [BR:
vcan03009
]
Eukaryotic type
Pre-60S particles
Helicases
122414479
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
PRAI
Motif
Other DBs
NCBI-GeneID:
122414479
NCBI-ProteinID:
XP_043281723
EnsemblRapid:
LOC122414479
LinkDB
All DBs
Position
8:16700926..16708824
Genome browser
AA seq
612 aa
AA seq
DB search
MSFRDRDRNDRRGGGGGSGGGRGGSGSRFGSNRDSGPNRYGGGSGGGRDSGGFGNSSFKN
RQPGERLRKPRWDMGTLQPFRKDFYVPHPQVVSRDPHKVEAYRSDKEITVKGNAIPGPAI
YFEEGGFPDYVMSEIRRQGFEAPTAIQAQGWPIALSGRDMVGIAQTGSGKTLAYILPAIV
HINNQPRLNRGDGPIALVLAPTRELAQQIQQVAADFGVSSQVRNTCIFGGAPKGPQARDL
ERGVEICIATPGRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQ
TLMWSATWPKEVRNLAEEFLTDYIQINVGSLQLAANHNILQIVDVCEEYEKEGKLMKLLE
EISNEPENKTIIFVETKRKVDDITRAINRYGWQAIGIHGDKSQQERDYVLNQFRNSRSAI
LVATDVAARGLDVEDVKFVINLDYPSNSEDYVHRIGRTGRSQRTGTAYAFFTPGNAHKAN
DLIEVLDEAKQVVNPKLYDLSRNPGNFKRGRYGGRSGGGAGGSRGFGSRGGSRGGSRGGR
DMGDRGRSDRGGDRGNKWGNSNSGGMSGGYGGNSSKPFQQSGYGGGSGSGGGYGQNGNSY
GSGGGYGQRNGY
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgtcattccgagaccgtgatcgcaatgacagacgaggaggtggaggtggcagcggcggt
ggtagaggcggaagcggaagtcgttttggcagcaatcgtgacagcggtccaaacagatac
gggggtggcagcgggggtggaagagatagcggtggatttggcaattcgtctttcaagaac
cgacagccaggagaacgtttgcgaaagcccagatgggatatgggtacattacaaccgttt
aggaaagatttttatgtgccacatccacaagtcgtgtcacgagatccgcacaaagtagag
gcttatcgttcggacaaagagatcacagtaaaggggaacgcaatacccggaccggcaata
tattttgaggaaggaggatttccggactatgtcatgagtgaaattcgcaggcaaggtttt
gaggcccccaccgcgatacaggctcaaggctggccgatcgctttgtcagggcgcgacatg
gttggcatcgctcagacgggttcgggcaaaactttggcttacatattacctgcgattgtg
cacattaataaccaaccgcgtttgaatcgaggggacggaccaattgctcttgttctcgct
cccacgagagaattggcccaacagattcagcaggtagccgctgacttcggagtgtcctcg
caggtgcggaacacatgtatattcggtggtgccccaaaaggaccgcaagctcgcgatctt
gaacgaggcgttgaaatctgcattgccacacccgggagactgatagattttctcgaacgt
ggcaccacgaacctccggcgttgcacttatctcgtactcgacgaagccgatcgtatgctt
gatatgggcttcgaacctcagatacgtaagatagtcgaacaaatacgacctgatcgacag
actctcatgtggtccgccacttggcccaaagaagtccggaacttggccgaagaattcctt
actgattacatacaaatcaatgtcggctcgctacaactcgcggccaatcacaatatcctt
cagatcgttgatgtctgcgaggaatacgaaaaagaaggaaaactcatgaaattgctcgaa
gaaatctcgaacgagcctgaaaataaaactatcatttttgtcgagaccaagagaaaggtc
gacgacatcacaagagccattaatcgatacggatggcaagctattggtattcacggagat
aaaagtcagcaagagcgggattacgttctcaatcaatttcgaaatagcagatcggcgatt
ctcgtggcaacggatgttgccgcacgaggtttagatgtggaggacgtgaaatttgtgatt
aatctggactacccctcgaactcggaggactacgtacatcgtatcggacgtactggacgc
tcgcaacgcaccggaacggcctatgctttcttcactcctggtaacgcacacaaagccaac
gatctcattgaggttcttgacgaggctaaacaagtcgttaatccaaagttgtacgatttg
tcaagaaatccggggaatttcaagagaggtcgatatggtggacgtagcggcggcggagcg
ggtggttcccgaggttttggcagtcgaggtggttcacgtggaggatcacgcggtggtcgc
gatatgggcgatcgtgggagatccgataggggtggagatcgtggaaacaaatggggtaac
agcaatagtggtgggatgagtggtggatatggcggtaacagcagtaaaccattccaacag
agcggctacggtggtggctccggtagcggaggtggttacggtcaaaatggtaattcgtac
ggaagcggtggaggttacggacaacggaacggctattga
DBGET
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