Venturia canescens: 122414480
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Entry
122414480 CDS
T09386
Name
(RefSeq) ATP-dependent RNA helicase dbp2-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
vcan
Venturia canescens
Pathway
vcan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122414480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vcan03041
]
122414480
03009 Ribosome biogenesis [BR:
vcan03009
]
122414480
Enzymes [BR:
vcan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122414480
Spliceosome [BR:
vcan03041
]
Complex A
U1 snRNP components
U1 related factors
122414480
Complex B
122414480
Ribosome biogenesis [BR:
vcan03009
]
Eukaryotic type
Pre-60S particles
Helicases
122414480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
122414480
NCBI-ProteinID:
XP_043281724
LinkDB
All DBs
Position
8:16691339..16699114
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AA seq
604 aa
AA seq
DB search
MFNRDRDQSRSRRGGGGRNGHSGGGDGHGRFNNRDSSNGNRGGGSKGKQHGGSLKKLHWD
TRTLEPIKKDFYIEHPAVRNRTSIYRTPDEICQFREAAEITVKGDNVPNPIQYFEEGNFP
PYVMNGIRNQGYSQPTAIQAQGWPIALSGKDLVAIAQTGSGKTLGYILPAIMHIIHQPRL
NPGDGPVALILAPTRELAQQIQEVANCFGESSVRNTCIFGGAPKGPQSQDLESGVEICIA
TPGRLIDFLERGTTNLRKCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWP
KEVRTLAEDFLTNYTHLNIGSLTLSANHNILQIVDVCQEYEKDTKLHRLLQEIGGEKENK
TIIFVETKRKVDDITRNIRRDGWQALSIHGDKNQQERDHVLQEFRSGRAPILVATDVAAR
GLDVDDVKYVINFDYPSSSEDYIHRIGRTGRRRQTGTAYAFFTTHNMKHANDLIEVLREA
GQTINPRLSEMAELAKSGNFAGRSGRRYGNSSGSDRGPGNRGSSGGRGNPGRGRGGGGRG
GGGSYHSGSNNFSNCDYNGYSSGKPSGGSGYNYNYNQRNNGNQGYGGGGDSYGSGGYQYR
GSAY
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacagagatagggatcagagcagatcgagacgaggaggaggtggaaggaatggc
cattctggaggaggagatggacatggtaggttcaacaatcgtgattcaagcaatggaaat
cgtggaggaggatccaaaggaaagcagcacggaggttctttgaaaaagcttcattgggac
acacggactttggagccaataaaaaaagatttttacattgaacatccagcggttagaaac
agaacatctatttataggacacctgacgaaatttgtcagttccgtgaagcagcagaaata
acagtcaaaggagacaatgtaccaaatcccatacaatactttgaagaaggaaatttccct
ccatatgttatgaacggcattagaaaccagggctactctcagcctacggccattcaagct
caaggatggcctattgctctcagcggcaaggatcttgttgctatcgcacaaaccggttct
gggaaaactttagggtatatattgccagcaataatgcacataattcaccagccacgcttg
aatccgggtgacgggcccgtggcattgatcttagcaccgactcgtgagttggctcagcag
atacaagaggtggcaaattgtttcggtgaatcgtccgtccgtaatacgtgcatattcggt
ggtgctccgaaaggtccgcagtctcaggatttggaaagcggggttgaaatttgtatagca
acgccgggacgtttgatcgattttttggagcgaggcacgacgaatttgcgcaaatgtact
tatctcgtgctcgatgaagctgatcgtatgctggacatgggcttcgagccacagatacgt
aaaattatcgagcagatacgccccgatcgtcaagtcttaatgtggtcagcaacttggcca
aaagaagttcgaactcttgccgaagattttctcaccaactacacgcacttgaatatcgga
tctctcaccctttcggccaatcacaatatactacagatcgttgacgtttgtcaggagtat
gagaaggacacaaagttacatagattgcttcaagaaatcggcggcgagaaggaaaacaaa
acgattattttcgtcgaaactaaacggaaagtcgatgacattactcgcaatatcaggcgc
gacggttggcaagctctcagtattcatggcgataagaatcaacaggaacgcgatcacgtt
cttcaagaatttcgcagcggcagagcaccgattctcgttgctaccgacgtcgctgcacgt
ggtttggatgtggacgacgttaaatacgtcattaatttcgattatccgtcctcgtccgag
gattatatacatcgtatcggacgtaccggtcgaagacgccaaactggaacggcctacgcc
ttcttcaccactcataatatgaaacacgcgaatgatctaatcgaggtccttcgggaagcg
ggacaaaccatcaacccgcggctcagcgagatggccgaattggccaaatctggaaacttt
gctggacgaagtggacgacgctatggaaattcatcgggctcggaccgaggcccgggaaat
cgaggttccagcggtgggcgtggaaatcctggacgtggaaggggtggaggtggacgtggg
ggaggaggatcctatcattcggggtcgaacaatttttcgaattgtgattacaacggttat
tcctcgggaaaaccttcgggtggttccggctacaattacaattacaatcagcgtaacaac
ggaaatcagggttacgggggtggcggagattcttatgggagcgggggttaccagtatcgg
ggatccgcttactaa
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