Venturia canescens: 122414647
Help
Entry
122414647 CDS
T09386
Name
(RefSeq) laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
vcan
Venturia canescens
Pathway
vcan04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122414647
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
F5_F8_type_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
122414647
NCBI-ProteinID:
XP_043282049
EnsemblRapid:
LOC122414647
LinkDB
All DBs
Position
8:10778628..10796915
Genome browser
AA seq
1776 aa
AA seq
DB search
MVLASCYRAALTAAIIIVFLTDFGDAQYGRDPRIAPKAKRRHPCEQGSCYPATGDLLIGR
KHHLTASSTCGLHGPERYCIVSHLRERKKCFFCDASSPKQQHNITNIVSGSGRNSWWQAE
NGVENVYIQLDLEAEFHFTHLIIRFQTFRPAAMLIERSHDFGKSWQVYRYFAHDCEQSFP
GVPTFGSKKLTDVVCDSHYSNVAPSEGGETIFRVLPPNLQSVIDNPYSKEVQNLMKMTNL
RINFTKLHTLGDDLLDDRPEIREKYYYAVKDMVIRGSCSCYGHASACLALPGVQNEEEMV
HGRCECTHNTKGLNCENCQDMFNDGPWKPAVGKQTNACRPCNCNDHATSCHFDEAVYEKS
GRVSGGVCDDCQHNTRGRNCEQCKPFFYHDVRRNITDQDACQPCDCDPGGSLDDGICDSR
TDVLSGEVSGRCHCKTNVEGRRCDVCKNGFWNFDANNPDGCEACTCNPLGTIDNQGCNMV
TGECTCKRYVTARDCNQCLPQYWGLSDDHDGCKPCDCDPGGSYDATCDVVTGQCRCRPHV
TGRNCNQPEQSYYTGALDFLIYEGELSRGSDNCQVVIREPYRDGRDNTWTGTGFMKASEG
ATMNFTINDIRRSMWYDVVLRYETLHPGIWQDVEIIVERDGPVEPEGPCADWHPENDRLW
VQLPHTARSAVADPAICLEAGKVYKVFIQFRKFDSQVDTPTASILVDSIVLRPRIEAIPF
FSGSGPGEMRRKEYDRNRCNEIFNDVARYSSREAEICEKYRNSIGYYVFDGAHSCECNRT
GSHSLLCENYGGLCPCKTNVVGRRCDHCAPGTYGFGPEGCVACDCNAVGALDNFCDVETG
RCKCRPNTYGRSCGECNPGFWNFPHCKRCECNGHAESCDSKTGACINCRDYTTGHNCDRC
VETFYGDPRIGVDIPCRACPCPGTRDSGHSYADSCSLDSVTHDVICECYEGYSGPRCETC
AENYFGNPEESDGGCSPCNCSNNTDLARPGNCDPSTGRCLQCLYDSDGPNCQYCKPGFYG
NALEKDCHDCMCDVLGTDASAGPCNHRNGQCPCLPHVVGKLCDACEENHWRIASGQGCDP
CECDPVGSISDTCNPFDGTCECRSGFGGRRCNECQANYYGNPNLECLPCLCDEIGSASQQ
CDRVTGSCVCHKGIGGEKCDRCDRGYIGDAPSCSPCGECFDNWDLILDGLRNKTNLVIEE
ASRIQKVGTTGVYSQQFDEMIDNLDQVRGLITSTSVRSQDLDVLNDLAENLASNITESEK
TLKNVQNELELVSNRVNLDDVSLKGLKNRTNNLHQGAALLSEDAMRLQEANVQGALNVTQ
QMAEQSKQAEKMANETTNVLGDAERYRKHTETFLAKNSAAVNDAQERSIESLQKLDRKLK
EFDDEMPNLNLGMCGDNVTDCSNVCGGAGCGSCGGLSCDAGAITKANQALDVAKKQAAKI
KLHRDEAEQLLRNMLDIKQDATAARGNAQDAFNAAWDARNRSDAVAKSVTEATERIWSML
NEDQPTPVMVRDLAEEVLSKNIHLQPDEIKKLADKIKDIVGSLTDSDRILADTANDRKNA
HDLEVRAKRAKEAALEKQTQAGKVVELLADTQEAQGKAESAIDQAEHDIALSEKDLKDIN
EVTKEAGKKAANTTASVDALEALLTQLQGQSVRNDFVLKDEIRNELLKVANNATIVKNKS
DRLGSEYKRAGDSLNYRVTKSKDDIQRAKQLLQRASELTADTSTKFKDLDGMESVYRDND
RLLGDLMGEVDALTAQMERHLAEIERKSQFSRHCQV
NT seq
5331 nt
NT seq
+upstream
nt +downstream
nt
atggtccttgcttcttgttatcgggcggccctgacagccgccattattatcgttttttta
acagattttggagatgcacaatacggaagagacccgcgaatcgcgccgaaagcgaaaaga
agacacccctgtgagcaaggatcttgttatccggcaacgggggatttgctcataggccgg
aagcaccatttgaccgcctcctcgacgtgtggtctccacgggcctgaaagatattgcatc
gtttcccatttgagggagaggaagaaatgtttcttctgcgatgcttcgtcgccgaagcag
cagcacaacatcacgaacatcgtgagcgggtcgggcaggaactcttggtggcaggcggag
aacggggtggaaaacgtgtacatccagctggacctcgaggccgaattccacttcacccac
ttgataatccgcttccagacgttcagaccggcggcgatgctgatcgagaggtcccacgat
ttcggaaaaagctggcaagtctatcgttactttgctcacgactgcgaacaatcgttcccg
ggcgtgccgaccttcgggtcgaaaaagctgacggacgttgtttgcgattcccactactcg
aacgtcgcgccttccgaaggcggtgaaaccattttccgcgttttgcctccgaacttgcaa
tccgtcatcgacaatccgtactcgaaggaagtgcagaatctcatgaaaatgacgaacctc
cgcatcaacttcaccaaactgcacaccctcggcgacgacctcttggacgatcgacccgaa
attcgagagaaatattactacgccgtcaaggacatggtcatccgcggatcctgctcttgc
tacggccacgcgtccgcctgcctcgcacttccgggcgtacagaacgaggaagaaatggtt
cacggacgctgcgagtgtacccacaacacgaagggtctcaactgcgaaaactgccaagac
atgttcaacgacggcccgtggaaacccgccgtcggcaaacaaaccaacgcctgcagaccc
tgcaactgcaacgaccacgcaacctcttgccacttcgacgaagctgtctacgaaaaatcg
ggacgcgtttccggcggcgtctgcgacgattgccaacacaacaccagaggccgaaactgc
gaacagtgcaaaccctttttctatcatgacgttcggagaaatatcaccgatcaggatgcc
tgtcaaccgtgcgactgtgatcccggtggttcgttggacgacggaatttgcgattcgagg
acggacgtgctgagtggcgaggtgtctggtcgttgccattgcaaaacgaacgtcgaggga
cgtcgttgcgacgtgtgcaaaaatggattctggaatttcgacgccaacaatccagacggt
tgcgaagcttgcacttgcaaccctctcgggaccatcgacaatcaaggctgcaacatggtc
acgggcgaatgtacctgcaaacgttacgtcacggcccgtgactgtaatcagtgtttgccg
caatattggggactgagcgacgatcacgacggttgcaagccttgcgactgcgacccgggt
ggctcctacgatgctacttgtgacgttgtaactggacagtgccgttgtcgaccccacgtc
accggcagaaactgcaaccaacctgagcagagttactacacaggagctttggatttcctg
atttatgagggcgaactttcgagaggcagtgacaattgtcaggtcgtgataagggagcct
tacagagatggcagagacaacacgtggacgggaacgggtttcatgaaagcttcggaaggt
gcaacgatgaatttcaccataaatgacatccgaagatcgatgtggtacgacgtcgtcttg
cgttacgaaactttgcatcctggtatctggcaagacgttgaaataattgttgagcgagac
ggtcccgtcgagccggagggtccgtgcgccgactggcatcccgaaaacgatcggctgtgg
gtgcagttgcctcacacggctcgcagtgccgttgctgatccagcgatctgcctcgaagct
ggcaaggtttacaaggttttcattcagttccggaaattcgacagccaagtcgacactccg
acggcgtcgatactcgtcgattcgatcgttttaaggccgaggatcgaagcgattccattc
ttcagcggttctggccccggtgaaatgcgtcgcaaggagtacgacaggaaccgttgtaac
gagatattcaacgacgttgctcgctacagctcccgggaggcggaaatctgcgaaaagtac
agaaacagcatcggttactacgttttcgacggcgcccattcctgcgagtgcaaccgaacc
ggttcgcacagtctcctctgcgagaactacggcggcctgtgcccgtgtaaaacgaacgtt
gttggcaggcgctgcgatcactgtgcgccaggaacttacgggttcggtccggagggctgc
gtcgcctgcgactgcaacgcggtcggggctctggacaatttctgcgacgttgaaaccgga
cgctgcaaatgtcgaccgaacacttacggccgcagttgcggcgagtgcaaccccgggttc
tggaacttcccacactgcaaacgctgcgaatgcaacggacacgccgagtcgtgcgactcc
aaaactggcgcttgcatcaactgccgcgattacactaccggccacaactgcgatcgatgc
gtcgaaacgttctacggcgatccacgaatcggagtcgacattccgtgcagagcctgcccg
tgtccaggcaccagggattcgggacattcgtacgcggacagttgcagcctcgattctgtg
acgcacgacgtaatttgcgaatgctacgaaggttactcggggcctcgatgtgaaacctgc
gccgagaattacttcggcaatccggaggagtcggacggcggctgttcgccttgtaattgc
agcaacaacacggatctcgcgaggcctggaaattgcgaccccagcacgggaaggtgcctc
cagtgtctctacgacagcgacgggcccaattgccagtattgcaaaccaggcttttacggt
aacgctctggaaaaggattgccatgattgcatgtgcgacgttttgggaaccgacgccagc
gctgggccctgcaaccaccgcaacgggcagtgtccctgcctccctcacgtcgtgggcaag
ctctgcgacgcttgtgaagaaaatcactggagaatcgcgagcggacagggctgcgatccc
tgcgagtgcgacccggtcggaagcatatcagacacgtgcaatccgttcgatgggacctgc
gagtgtcgatccggtttcggtgggcgtcgttgcaacgagtgccaagcgaattactatgga
aatccgaacttggagtgtttgccttgtctttgcgacgagattggttcggcgagtcagcaa
tgtgaccgtgtgacgggttcctgcgtgtgccacaaaggcatcggaggtgagaagtgcgac
cggtgcgaccgtggctacatcggggacgcgccgtcttgcagtccttgcggcgagtgtttc
gacaattgggacttgattcttgacggtttgaggaacaagacgaatctcgtgatcgaggaa
gcctccagaattcaaaaagtcggtacgaccggagtttacagtcagcagtttgacgagatg
atcgataatttggaccaggttcgaggcctgattacgagcacatcggtccggagtcaagat
ctcgacgtgctcaacgatttggccgagaatctcgcgagcaacatcaccgaatcggaaaaa
actttgaagaatgttcagaacgaattggagctggtcagcaaccgggtcaatctcgacgac
gtttctcttaaggggttgaaaaaccgtacgaataacctccaccagggcgcggcactgttg
agcgaggacgcgatgaggctccaagaagcaaacgtccaaggagcactcaacgtcactcaa
caaatggcggagcaatcgaaacaagctgagaaaatggccaacgaaacgaccaacgtcctc
ggcgacgccgaaaggtacagaaaacacaccgaaacattcctagccaagaacagcgccgcc
gtcaacgacgcgcaagaacgcagcatcgagtctctccagaaactggacaggaaactcaag
gaattcgatgacgaaatgcccaacctcaatctcggcatgtgcggcgacaacgttaccgat
tgcagcaacgtctgcggaggcgccggctgcggatcatgcggcggactttcctgcgacgcc
ggcgccatcaccaaagccaatcaagcccttgacgtcgccaaaaaacaagccgccaaaatc
aaattgcacagggacgaagctgaacaacttttgcgaaatatgttggacattaaacaagac
gcgacagccgctcgtgggaacgctcaggacgcgttcaacgcagcttgggacgcgagaaat
cgctccgacgccgtagccaaatcggtgaccgaagctaccgaaagaatttggagcatgctc
aacgaggatcaaccgactccggtaatggtgcgcgatctcgctgaagaagttttgagcaaa
aacatccacctccaacccgacgagataaagaaactcgctgacaagatcaaggacatcgtc
ggatctctaaccgattccgacagaattctcgccgacacggccaacgacaggaaaaatgct
catgaccttgaagttcgtgcgaagagggccaaagaagcagccctggaaaagcagacgcag
gcaggaaaggtcgtcgaattattggccgatactcaagaggcgcagggcaaagccgaatcg
gcgatcgaccaggccgagcacgacatcgctctgtcggagaaagatttgaaagacatcaac
gaggtgacgaaggaagcgggaaagaaggccgcgaacacgacggcctcggtggatgctttg
gaagcccttttgacccaacttcagggacaatcggtgagaaacgatttcgttctaaaggac
gagatccgaaacgagttattgaaagtcgccaacaacgcgacgatcgttaagaacaaaagt
gatcgtttgggcagcgagtacaagcgagccggagattcgttgaactatcgagtgaccaag
agcaaagacgatattcaaagagcgaaacaattgttgcaacgagcatccgagctgaccgcc
gacacatcgaccaaatttaaggacctcgacggtatggaaagcgtttatcgagacaacgac
agactgctgggcgatctcatgggcgaagtcgacgctctgacggcccagatggaacgccat
ctcgctgagatcgagcggaaatcccagttctctcgtcactgccaggtctga
DBGET
integrated database retrieval system