Venturia canescens: 122414865
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Entry
122414865 CDS
T09386
Name
(RefSeq) RNA exonuclease 1 homolog isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
vcan
Venturia canescens
Pathway
vcan03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vcan00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122414865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vcan03009
]
122414865
Ribosome biogenesis [BR:
vcan03009
]
Eukaryotic type
Pre-60S particles
RNases
122414865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EloA-BP1
Motif
Other DBs
NCBI-GeneID:
122414865
NCBI-ProteinID:
XP_043282413
LinkDB
All DBs
Position
8:complement(22391985..22398478)
Genome browser
AA seq
1327 aa
AA seq
DB search
MLPSTGYFKAIICPFYENGSCDRPYCHFKHFRRDITFRSKVSQSVKDDSTSMGTTSACRS
EAVETIEKTESSAVGSGAKDKAEIHLLVNEAVKKLLEGQEVEDTRAMTDKIVAQVVEKLK
PSISSNSATGCIVGAQKTSIAHASGKHTGVPGCVTKPSVCVYNPTPISELKKRHIPVPVY
MPTRENRVAPKRKSSSDVLTKPWLKMLQESSSFEMTYKPTAIVNPSQEPAAATVAATAVA
ETSSKTYVPTLRSDNSSSNSYDDGNSNDYSGKVKDAYYPKSKKRREEYVPKKIKTPLKNV
HQQLEDSVLEDFEPEFNIIDEILTSSPGTTLIDDVHASMENENSEDLCYIEPKFSEDEEE
EEEEEEEEEEATATAPAPTGAVEGQEEEETEGTITVEPPMAKKVQRGAPNVETIPRDIPN
VVAKDESAQVGINESEQKKLRKSCHKTQSHEKRYKDTNNSRRSSSKDDKGRRASSVGEER
NKKKERLESSSKSDGGSKREERETRRKEDRSKRKGHHENKSGHDKNESRDKNRHNSSSKR
EKKRSSTPNKDKDKDRSKDNRNNDVKRMSSHSSKKDATTSSCLSKDDKLSGSRSDDGKTR
EKSRRDNNKHPSSSSTASSLSKSKNSNKHQSHKSDEKKRGISRSGSSHKSDKTDDKKSRS
HRRRKESSSETSNVEPDDRSDSPLENHHSFNEESLMQTSDSDHDVEEECLKIFQEYEPSD
RPKGVTARERKKSQPEDSNEEVGRKRVAHPSAAETAVHSHRQKHPIPKAPLPQQKMYERW
RNAREAVEKKNAEGKVVKEEEEEEEEASSSSKQMEKKGIPVTAQESRIHSVNAMSQASAC
INAQINGNGKIRIAHVPYAMALALKKKQVTESKAAMEERALAALQARTAAQTAKGSRVAH
IPQVVPQLVAPEPLQAATQKFPINVRQYYVNMMHVICVQIYTKGEDAAERALREELACHD
RCKALSVYKNSCMLATHRLRKEAEQGTNGEDSLPSASGIVSHNAVLAGKSKGSWSVEKTK
KSVKDYRGAALYERLRKWIATDQQLKDNGYPRPHPDGSKGRAKIYVANTRNQSILSKVPN
ERYCSRCCKPFVVDKHGFPVVQENCIYHWGRKFTTRGESKYTCCQQYGFASGCADGKYHV
WDHVDYENLRGYVKTLPKDSPAESQGVYALDCEMSYTTQGLELTRVTVINDKCNIIYETL
VMPENPILDYNTRFSGITEETMKGVKTSLLDVQATLLTMFSENTILIGHSLESDFKALKL
IHDTVVDTSIMFPHKNGPPHKRALKNLCSEYLRKIIQNEVGGHDSAEDAIACMDLIHWKV
KEEAKLE
NT seq
3984 nt
NT seq
+upstream
nt +downstream
nt
atgcttccgtctaccggttatttcaaagctattatttgccctttttacgaaaacggctcc
tgcgacaggccctattgtcatttcaaacacttccgccgagatatcacattccgttccaaa
gtctcacaatccgtcaaagatgattctacgagtatgggaacgacatcggcgtgccggtcc
gaggcggttgaaacaattgaaaaaacggagagctccgcggtggggtccggagcaaaggac
aaagcggaaattcatttgttggttaatgaagctgtgaaaaaattactggagggccaagaa
gtcgaggacaccagagcgatgacggataaaatagttgctcaagtggtggagaaattgaag
ccctctatatcgtctaactcggcgaccggttgcatcgttggagctcagaaaacatcgatc
gcccatgcgtctggcaaacacacgggcgtaccgggttgcgtgacgaaaccatcggtctgc
gtttacaatcctacaccgatatccgaattaaagaaacgccatattccggtgccggtttat
atgccaacgagagaaaatcgtgtagctcctaagagaaaatcgtcgtcggacgttttaacg
aaaccgtggctcaaaatgcttcaagagtcgagcagttttgagatgacttacaagccaacc
gcgattgtgaatccatcgcaggaaccggccgccgcgacggtagcggcgacggcagtcgcg
gaaacctcatcgaaaacttatgtgccgactcttaggtccgacaattcgtcgtcaaattcg
tacgacgatggtaattcgaacgattattcgggcaaagtaaaagatgcttattatccgaaa
tcgaagaagagacgggaggaatatgtaccgaagaaaataaagacaccactgaaaaacgtt
catcaacaattggaagattcggtgctcgaggatttcgagccggagttcaacattatcgat
gaaatactgacttcgtcaccgggaacgactctgatcgacgatgttcacgcgtcaatggaa
aacgaaaattccgaagatctttgctacatcgaacccaaattctcagaggacgaggaggaa
gaggaggaggaggaggaggaggaggaggaggcgacggcgacggctccagctccgacaggg
gcggtggaagggcaagaggaagaggaaactgaaggaacaatcacggttgaaccgccgatg
gccaaaaaagtacaaagaggtgccccaaatgtcgaaacaattccaagagacatccctaat
gtcgtagcgaaagatgaaagtgcccaagttggaattaacgaaagcgaacagaagaaatta
cgaaaaagctgccacaagactcaaagccatgaaaaaagatacaaagatacaaacaattca
aggcgcagcagtagcaaagacgacaaggggcgacgagcctctagcgtcggtgaagagcgt
aacaagaaaaaagaacgcttggaatcaagtagtaaaagcgatggcggtagtaagagagag
gaaagagaaactcggagaaaggaagatcggagcaagagaaagggtcatcatgaaaataag
agcggtcacgataaaaatgagagtagagacaaaaataggcacaatagttctagcaaaaga
gagaaaaaacgttcctcaactccgaacaaagataaagataaagatagaagtaaggataat
cggaataacgatgtgaagaggatgagttctcatagcagtaaaaaagacgctactacctcg
agctgtttgagcaaagacgacaagttatctggctcgaggagcgatgacggtaaaactcgc
gaaaaatcgagacgcgacaacaacaaacacccgtcgtcaagttccaccgcttcctctctt
tcaaaatcaaaaaattcgaataaacatcaaagtcacaagagcgatgaaaaaaaacgcggt
atttcgcgttctggctcttctcacaaatctgacaaaactgatgataaaaagtcgaggagt
catcgtcgtcgtaaagaatcgagcagtgaaacgagcaacgttgagccggacgatcgttcc
gatagcccattggaaaatcatcattcattcaacgaagaatcattgatgcagacctcggac
tctgaccacgacgtcgaggaagaatgtttgaagatctttcaggagtacgagccttccgat
cgtcccaaaggagttacagcgagagagagaaaaaaaagtcagccggaagatagcaacgag
gaggtgggaagaaaacgcgtggctcacccttcggcagcggaaacggccgtacattcgcac
cgacagaaacatccgattcccaaagctccgcttcctcaacaaaaaatgtacgagcgttgg
cgtaacgcaagagaagcggtagagaaaaaaaatgccgagggaaaggtcgtcaaggaggag
gaggaggaggaggaggaggcgtcatcgtcgagcaagcaaatggagaagaaagggattccc
gtaacggctcaagaatcgagaattcattccgtcaacgcaatgtctcaggcttccgcttgt
ataaacgctcagatcaatggaaacggaaaaatccgaatcgctcacgttccgtatgcaatg
gcgctggctttgaaaaagaaacaagtaaccgagtcaaaggcggcaatggaagaaagggcg
ttagcggcattgcaagcgaggaccgctgcacaaacggcgaaagggtcgcgcgtcgctcac
ataccacaagtggtaccccagctggtggcacccgagccgctacaagccgcgacgcaaaag
tttccgataaacgttcggcagtactacgtcaacatgatgcacgttatatgcgtccaaata
tacacgaaaggagaagacgcggctgagcgagcgctacgagaagaattggcctgtcatgat
cgttgcaaagctctctccgtttacaagaattcatgtatgctcgcgactcacagattacgg
aaagaggccgaacaaggaacaaacggtgaagattcattaccatcggccagcggtatcgtt
tctcacaacgctgttctcgcaggcaagtcgaaaggttcgtggagcgttgaaaaaactaaa
aaatccgttaaggattatcgaggagctgctctctatgaaaggcttagaaagtggatcgcc
actgatcaacaattgaaggacaacggatatccaagacctcatcccgatggatcaaaagga
cgcgctaaaatttatgtcgccaacacgaggaatcagtcgattctttcgaaagtgcctaat
gagcgttactgctcaagatgctgcaaacctttcgtcgtcgacaagcacggatttccggtg
gtacaagaaaattgtatttatcattggggacgaaaattcacgacgagaggcgaatcaaaa
tatacgtgctgccagcaatatggatttgcttcgggctgcgccgatggaaagtatcacgtt
tgggatcacgttgattatgaaaatcttcggggttacgttaaaactttgcccaaagattcg
ccagccgagtcacaaggtgtttacgctcttgactgtgaaatgtcgtacacgactcaggga
ctcgagctgaccagagttaccgtcataaatgacaaatgcaatatcatttacgagactctc
gttatgcctgagaatccaatactcgactacaatacaagattttcaggcataactgaggaa
actatgaagggcgttaaaacatcgcttctcgacgttcaggcgaccttattgaccatgttt
tccgaaaatacgatattgatcggtcacagtttggagagtgatttcaaggcgttgaaactt
atacacgacacggtcgttgacacaagtattatgtttccccacaaaaacggacccccccat
aagcgggccctcaagaatttgtgctccgagtatcttcgaaaaattatacagaacgaggtc
ggtggccacgacagtgcggaagatgcgattgcctgcatggatctcatacactggaaggtc
aaggaagaggcgaaactcgaataa
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